RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 CARHSP1Q9Y2V2 147 aaKnown RBP3.3□□□□□ -1.88
COL4A3-206ENST00000487633 PHLDA3Q9Y5J5 127 aa3.3□□□□□ -1.88
COL4A3-206ENST00000487633 TRBV25-1A0A075B6N4 114 aa3.29□□□□□ -1.88
COL4A3-206ENST00000487633 A0A1B0GUV1 79 aa3.29□□□□□ -1.88
COL4A3-206ENST00000487633 KRBOX1C9JBD0 128 aa3.29□□□□□ -1.88
COL4A3-206ENST00000487633 TMEM250H0YL14 139 aa3.29□□□□□ -1.88
COL4A3-206ENST00000487633 GZMBP10144 247 aa3.29□□□□□ -1.88
COL4A3-206ENST00000487633 SSTP61278 116 aa3.29□□□□□ -1.88
COL4A3-206ENST00000487633 PEA15Q15121 130 aa3.29□□□□□ -1.88
COL4A3-206ENST00000487633 NDUFA5Q16718 116 aa3.29□□□□□ -1.88
COL4A3-206ENST00000487633 CLLU1Q5K131 121 aa3.29□□□□□ -1.88
COL4A3-206ENST00000487633 COMMD7Q86VX2 200 aa3.29□□□□□ -1.88
COL4A3-206ENST00000487633 TYMSOSQ8TAI1 123 aa3.29□□□□□ -1.88
COL4A3-206ENST00000487633 FAM210AQ96ND0 272 aa3.29□□□□□ -1.88
COL4A3-206ENST00000487633 SMIM7Q9BQ49 75 aa3.29□□□□□ -1.88
COL4A3-206ENST00000487633 TPPP3Q9BW30 176 aa3.29□□□□□ -1.88
COL4A3-206ENST00000487633 XKRY2A2RUG3 117 aa3.28□□□□□ -1.88
COL4A3-206ENST00000487633 ZNF727A8MUV8 499 aa3.28□□□□□ -1.88
COL4A3-206ENST00000487633 RPS20P60866 119 aaKnown RBP3.28□□□□□ -1.88
COL4A3-206ENST00000487633 SYCNQ0VAF6 134 aa3.28□□□□□ -1.88
COL4A3-206ENST00000487633 ZNF56Q15929 161 aa3.28□□□□□ -1.88
COL4A3-206ENST00000487633 LINC01559Q495D7 138 aa3.28□□□□□ -1.88
COL4A3-206ENST00000487633 COX8CQ7Z4L0 72 aa3.28□□□□□ -1.88
COL4A3-206ENST00000487633 NUP35Q8NFH5 326 aa3.28□□□□□ -1.88
COL4A3-206ENST00000487633 OR2D3Q8NGH3 330 aa3.28□□□□□ -1.88
COL4A3-206ENST00000487633 SMIM12Q96EX1 92 aa3.28□□□□□ -1.88
COL4A3-206ENST00000487633 MLST8Q9BVC4 326 aa3.28□□□□□ -1.88
COL4A3-206ENST00000487633 TRBV20OR9-2A0A075B6H5 130 aa3.27□□□□□ -1.89
COL4A3-206ENST00000487633 IGLV4-69A0A075B6H9 119 aa3.27□□□□□ -1.89
COL4A3-206ENST00000487633 IGHV1-24A0A0C4DH33 117 aa3.27□□□□□ -1.89
COL4A3-206ENST00000487633 LOC107984640A0A0U1RRK4 108 aa3.27□□□□□ -1.89
COL4A3-206ENST00000487633 LCE2BO14633 110 aa3.27□□□□□ -1.89
COL4A3-206ENST00000487633 SRP19P09132 144 aaKnown RBP3.27□□□□□ -1.89
COL4A3-206ENST00000487633 RAB4BP61018 213 aa3.27□□□□□ -1.89
COL4A3-206ENST00000487633 RPL18AQ02543 176 aaKnown RBP3.27□□□□□ -1.89
COL4A3-206ENST00000487633 TMEM241Q24JQ0 296 aa3.27□□□□□ -1.89
COL4A3-206ENST00000487633 FAM74A3Q4VXF1 159 aa3.27□□□□□ -1.89
COL4A3-206ENST00000487633 DNLZQ5SXM8 178 aa3.27□□□□□ -1.89
COL4A3-206ENST00000487633 SPANXN1Q5VSR9 72 aa3.27□□□□□ -1.89
COL4A3-206ENST00000487633 CFAP161Q6P656 301 aa3.27□□□□□ -1.89
COL4A3-206ENST00000487633 FAM19A5Q7Z5A7 132 aaPredicted RBP3.27□□□□□ -1.89
COL4A3-206ENST00000487633 ZFP82Q8N141 532 aa3.27□□□□□ -1.89
COL4A3-206ENST00000487633 OR10AG1Q8NH19 301 aa3.27□□□□□ -1.89
COL4A3-206ENST00000487633 OCC1Q8TAD7 63 aa3.27□□□□□ -1.89
COL4A3-206ENST00000487633 F5H697 171 aa3.26□□□□□ -1.89
COL4A3-206ENST00000487633 K7EN84 100 aa3.26□□□□□ -1.89
COL4A3-206ENST00000487633 GATCO43716 136 aaKnown RBP3.26□□□□□ -1.89
COL4A3-206ENST00000487633 SCO1O75880 301 aa3.26□□□□□ -1.89
COL4A3-206ENST00000487633 TSHBP01222 138 aa3.26□□□□□ -1.89
COL4A3-206ENST00000487633 SMIM17P0DL12 118 aa3.26□□□□□ -1.89
COL4A3-206ENST00000487633 S100A1P23297 94 aa3.26□□□□□ -1.89
COL4A3-206ENST00000487633 XCL1P47992 114 aa3.26□□□□□ -1.89
COL4A3-206ENST00000487633 ADIRFQ15847 76 aa3.26□□□□□ -1.89
COL4A3-206ENST00000487633 NUDT10Q8NFP7 164 aa3.26□□□□□ -1.89
COL4A3-206ENST00000487633 NUDT11Q96G61 164 aa3.26□□□□□ -1.89
COL4A3-206ENST00000487633 RNASE7Q9H1E1 156 aaKnown RBP3.26□□□□□ -1.89
COL4A3-206ENST00000487633 SMDT1Q9H4I9 107 aa3.26□□□□□ -1.89
COL4A3-206ENST00000487633 NEBP20929 6669 aa3.25□□□□□ -1.89
COL4A3-206ENST00000487633 C19orf71A6NCJ1 209 aa3.25□□□□□ -1.89
COL4A3-206ENST00000487633 C9JQL5 133 aa3.25□□□□□ -1.89
COL4A3-206ENST00000487633 F2Z2F3 143 aa3.25□□□□□ -1.89
COL4A3-206ENST00000487633 M0R2T5 61 aa3.25□□□□□ -1.89
COL4A3-206ENST00000487633 ZNF861PO60384 105 aa3.25□□□□□ -1.89
COL4A3-206ENST00000487633 CXCL1P09341 107 aa3.25□□□□□ -1.89
COL4A3-206ENST00000487633 OR5AL1P0C617 328 aa3.25□□□□□ -1.89
COL4A3-206ENST00000487633 CAMPP49913 170 aa3.25□□□□□ -1.89
COL4A3-206ENST00000487633 PKIAP61925 76 aa3.25□□□□□ -1.89
COL4A3-206ENST00000487633 SS18Q15532 418 aa3.25□□□□□ -1.89
COL4A3-206ENST00000487633 TWIST1Q15672 202 aa3.25□□□□□ -1.89
COL4A3-206ENST00000487633 LYZL1Q6UWQ5 148 aa3.25□□□□□ -1.89
COL4A3-206ENST00000487633 LINC01551Q86U37 167 aa3.25□□□□□ -1.89
COL4A3-206ENST00000487633 LINC00304Q8N9R0 145 aa3.25□□□□□ -1.89
COL4A3-206ENST00000487633 BORCS7Q96B45 105 aa3.25□□□□□ -1.89
COL4A3-206ENST00000487633 AP1S3Q96PC3 154 aa3.25□□□□□ -1.89
COL4A3-206ENST00000487633 TMEM243Q9BU79 118 aa3.25□□□□□ -1.89
COL4A3-206ENST00000487633 NAT8Q9UHE5 227 aa3.25□□□□□ -1.89
COL4A3-206ENST00000487633 A8MWL6 223 aa3.24□□□□□ -1.89
COL4A3-206ENST00000487633 M0QY20 66 aa3.24□□□□□ -1.89
COL4A3-206ENST00000487633 CCL25O15444 150 aa3.24□□□□□ -1.89
COL4A3-206ENST00000487633 SNAI2O43623 268 aa3.24□□□□□ -1.89
COL4A3-206ENST00000487633 APOMO95445 188 aa3.24□□□□□ -1.89
COL4A3-206ENST00000487633 MGPP08493 103 aa3.24□□□□□ -1.89
COL4A3-206ENST00000487633 FGF6P10767 208 aa3.24□□□□□ -1.89
COL4A3-206ENST00000487633 RNF151Q2KHN1 245 aa3.24□□□□□ -1.89
COL4A3-206ENST00000487633 KRTAP6-3Q3LI67 103 aa3.24□□□□□ -1.89
COL4A3-206ENST00000487633 C10orf25Q5T742 122 aa3.24□□□□□ -1.89
COL4A3-206ENST00000487633 FAM231DQ6ZW35 169 aa3.24□□□□□ -1.89
COL4A3-206ENST00000487633 SMIM15Q7Z3B0 74 aa3.24□□□□□ -1.89
COL4A3-206ENST00000487633 OR5A1Q8NGJ0 315 aa3.24□□□□□ -1.89
COL4A3-206ENST00000487633 PGLYRP4Q96LB8 373 aa3.24□□□□□ -1.89
COL4A3-206ENST00000487633 KRTAP9-8Q9BYQ0 159 aa3.24□□□□□ -1.89
COL4A3-206ENST00000487633 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.23□□□□□ -1.89
COL4A3-206ENST00000487633 IGHV1-58A0A0C4DH39 117 aa3.23□□□□□ -1.89
COL4A3-206ENST00000487633 IGKV2-29A2NJV5 120 aaPredicted RBP3.23□□□□□ -1.89
COL4A3-206ENST00000487633 TRGC1P0CF51 173 aa3.23□□□□□ -1.89
COL4A3-206ENST00000487633 IGLC6P0CF74 106 aa3.23□□□□□ -1.89
COL4A3-206ENST00000487633 ADCYAP1P18509 176 aa3.23□□□□□ -1.89
COL4A3-206ENST00000487633 NTF3P20783 257 aa3.23□□□□□ -1.89
COL4A3-206ENST00000487633 SEC61BP60468 96 aaKnown RBP3.23□□□□□ -1.89
COL4A3-206ENST00000487633 RPL23P62829 140 aaKnown RBP3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms