RNA–Protein interactions for RNA: ENST00000487565.5

GARNL3-218, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-218ENST00000487565 LYPD5Q6UWN5 251 aa5.26□□□□□ -1.57
GARNL3-218ENST00000487565 CHCHD1Q96BP2 118 aaKnown RBP5.26□□□□□ -1.57
GARNL3-218ENST00000487565 MRPS16Q9Y3D3 137 aaKnown RBP5.26□□□□□ -1.57
GARNL3-218ENST00000487565 PLECQ15149 4684 aaKnown RBP5.26□□□□□ -1.57
GARNL3-218ENST00000487565 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.25□□□□□ -1.57
GARNL3-218ENST00000487565 IGKV2-29A2NJV5 120 aaPredicted RBP5.25□□□□□ -1.57
GARNL3-218ENST00000487565 LINC01546A6NGU7 62 aa5.25□□□□□ -1.57
GARNL3-218ENST00000487565 HSBP1O75506 76 aa5.25□□□□□ -1.57
GARNL3-218ENST00000487565 BTF3P20290 206 aaKnown RBP5.25□□□□□ -1.57
GARNL3-218ENST00000487565 SMAGPQ0VAQ4 97 aa5.25□□□□□ -1.57
GARNL3-218ENST00000487565 ESRGQ1W209 222 aa5.25□□□□□ -1.57
GARNL3-218ENST00000487565 CASC10Q5T4H9 136 aa5.25□□□□□ -1.57
GARNL3-218ENST00000487565 AMMECR1LQ6DCA0 310 aa5.25□□□□□ -1.57
GARNL3-218ENST00000487565 NTM-AS1Q6ZSK4 140 aa5.25□□□□□ -1.57
GARNL3-218ENST00000487565 NIT1Q86X76 327 aa5.25□□□□□ -1.57
GARNL3-218ENST00000487565 TMEM18Q96B42 140 aa5.25□□□□□ -1.57
GARNL3-218ENST00000487565 URB1-AS1Q96HZ7 61 aa5.25□□□□□ -1.57
GARNL3-218ENST00000487565 CHCHD7Q9BUK0 85 aa5.25□□□□□ -1.57
GARNL3-218ENST00000487565 CYSLTR1Q9Y271 337 aa5.25□□□□□ -1.57
GARNL3-218ENST00000487565 ALMS1Q8TCU4 4167 aa5.25□□□□□ -1.57
GARNL3-218ENST00000487565 HBDP02042 147 aa5.24□□□□□ -1.57
GARNL3-218ENST00000487565 S100A6P06703 90 aa5.24□□□□□ -1.57
GARNL3-218ENST00000487565 LINC00614P0C842 121 aa5.24□□□□□ -1.57
GARNL3-218ENST00000487565 ESDP10768 282 aa5.24□□□□□ -1.57
GARNL3-218ENST00000487565 G0S2P27469 103 aa5.24□□□□□ -1.57
GARNL3-218ENST00000487565 NDUFA6P56556 154 aa5.24□□□□□ -1.57
GARNL3-218ENST00000487565 GAGE6Q13070 117 aa5.24□□□□□ -1.57
GARNL3-218ENST00000487565 WFDC10BQ8IUB3 73 aa5.24□□□□□ -1.57
GARNL3-218ENST00000487565 C20orf203Q8NBC4 194 aa5.24□□□□□ -1.57
GARNL3-218ENST00000487565 LINC00588Q9Y4M8 146 aa5.24□□□□□ -1.57
GARNL3-218ENST00000487565 TENM2Q9NT68 2774 aa5.24□□□□□ -1.57
GARNL3-218ENST00000487565 CSMD3Q7Z407 3707 aa5.23□□□□□ -1.57
GARNL3-218ENST00000487565 A0A087WX48 190 aa5.23□□□□□ -1.57
GARNL3-218ENST00000487565 LINC01549A6NIU2 74 aa5.23□□□□□ -1.57
GARNL3-218ENST00000487565 H7C423 109 aa5.23□□□□□ -1.57
GARNL3-218ENST00000487565 FGF6P10767 208 aa5.23□□□□□ -1.57
GARNL3-218ENST00000487565 PMCHL1Q16048 86 aa5.23□□□□□ -1.57
GARNL3-218ENST00000487565 COA6Q5JTJ3 125 aaKnown RBP5.23□□□□□ -1.57
GARNL3-218ENST00000487565 C2orf66Q6UXQ4 117 aa5.23□□□□□ -1.57
GARNL3-218ENST00000487565 OR5A1Q8NGJ0 315 aa5.23□□□□□ -1.57
GARNL3-218ENST00000487565 TMEM101Q96IK0 257 aa5.23□□□□□ -1.57
GARNL3-218ENST00000487565 UPK3BQ9BT76 320 aa5.23□□□□□ -1.57
GARNL3-218ENST00000487565 SPANXA1Q9NS26 97 aa5.23□□□□□ -1.57
GARNL3-218ENST00000487565 TMEM262E9PQX1 116 aa5.22□□□□□ -1.57
GARNL3-218ENST00000487565 SIVA1O15304 175 aa5.22□□□□□ -1.57
GARNL3-218ENST00000487565 ZNF25P17030 456 aaPredicted RBP5.22□□□□□ -1.57
GARNL3-218ENST00000487565 RPL39P62891 51 aaKnown RBP5.22□□□□□ -1.57
GARNL3-218ENST00000487565 MPV17L2Q567V2 206 aa5.22□□□□□ -1.57
GARNL3-218ENST00000487565 DGAT2L7PQ6IED9 249 aa5.22□□□□□ -1.57
GARNL3-218ENST00000487565 MRPL52Q86TS9 123 aaKnown RBP5.22□□□□□ -1.57
GARNL3-218ENST00000487565 TOMM6Q96B49 74 aa5.22□□□□□ -1.57
GARNL3-218ENST00000487565 A0A096LNJ9 63 aa5.21□□□□□ -1.58
GARNL3-218ENST00000487565 IGHV3-30P01768 117 aa5.21□□□□□ -1.58
GARNL3-218ENST00000487565 IGHV3-33P01772 117 aa5.21□□□□□ -1.58
GARNL3-218ENST00000487565 IGHV3-30-3P0DP02 117 aa5.21□□□□□ -1.58
GARNL3-218ENST00000487565 IGHV3-30-5P0DP03 117 aa5.21□□□□□ -1.58
GARNL3-218ENST00000487565 S100A2P29034 98 aa5.21□□□□□ -1.58
GARNL3-218ENST00000487565 RBX1P62877 108 aa5.21□□□□□ -1.58
GARNL3-218ENST00000487565 PDZD11Q5EBL8 140 aa5.21□□□□□ -1.58
GARNL3-218ENST00000487565 LINC01556Q5JQF7 62 aa5.21□□□□□ -1.58
GARNL3-218ENST00000487565 Q6ZN92 141 aa5.21□□□□□ -1.58
GARNL3-218ENST00000487565 Q6ZUT4 128 aa5.21□□□□□ -1.58
GARNL3-218ENST00000487565 FAM19A2Q8N3H0 131 aa5.21□□□□□ -1.58
GARNL3-218ENST00000487565 Q8N9P0 234 aaPredicted RBP5.21□□□□□ -1.58
GARNL3-218ENST00000487565 SCGB3A1Q96QR1 104 aa5.21□□□□□ -1.58
GARNL3-218ENST00000487565 TIMM21Q9BVV7 248 aa5.21□□□□□ -1.58
GARNL3-218ENST00000487565 UBE2D4Q9Y2X8 147 aa5.21□□□□□ -1.58
GARNL3-218ENST00000487565 NUPR1O60356 82 aa5.2□□□□□ -1.58
GARNL3-218ENST00000487565 ATP5LO75964 103 aa5.2□□□□□ -1.58
GARNL3-218ENST00000487565 CRPP02741 224 aa5.2□□□□□ -1.58
GARNL3-218ENST00000487565 DNAH10OSP0CZ25 163 aa5.2□□□□□ -1.58
GARNL3-218ENST00000487565 TTC32Q5I0X7 151 aa5.2□□□□□ -1.58
GARNL3-218ENST00000487565 PAPPA-AS1Q5QFB9 102 aa5.2□□□□□ -1.58
GARNL3-218ENST00000487565 LGALS9CQ6DKI2 356 aa5.2□□□□□ -1.58
GARNL3-218ENST00000487565 Q8N976 141 aa5.2□□□□□ -1.58
GARNL3-218ENST00000487565 TMEM141Q96I45 108 aa5.2□□□□□ -1.58
GARNL3-218ENST00000487565 TIMM17AQ99595 171 aa5.2□□□□□ -1.58
GARNL3-218ENST00000487565 HSPB8Q9UJY1 196 aa5.2□□□□□ -1.58
GARNL3-218ENST00000487565 VPS13DQ5THJ4 4388 aa5.19□□□□□ -1.58
GARNL3-218ENST00000487565 IFITM10A6NMD0 228 aa5.19□□□□□ -1.58
GARNL3-218ENST00000487565 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.19□□□□□ -1.58
GARNL3-218ENST00000487565 LEPROTL1O95214 131 aa5.19□□□□□ -1.58
GARNL3-218ENST00000487565 LY6G6CO95867 125 aa5.19□□□□□ -1.58
GARNL3-218ENST00000487565 ANGP03950 147 aaKnown RBP5.19□□□□□ -1.58
GARNL3-218ENST00000487565 IGKV2-30P06310 120 aa5.19□□□□□ -1.58
GARNL3-218ENST00000487565 CLPSL2Q6UWE3 100 aa5.19□□□□□ -1.58
GARNL3-218ENST00000487565 ERASQ7Z444 233 aa5.19□□□□□ -1.58
GARNL3-218ENST00000487565 HIST3H2BBQ8N257 126 aa5.19□□□□□ -1.58
GARNL3-218ENST00000487565 C10orf126Q8N4M7 172 aa5.19□□□□□ -1.58
GARNL3-218ENST00000487565 PACRGQ96M98 296 aaPredicted RBP5.19□□□□□ -1.58
GARNL3-218ENST00000487565 PYGO1Q9Y3Y4 419 aa5.19□□□□□ -1.58
GARNL3-218ENST00000487565 CSDC2Q9Y534 153 aaKnown RBP5.19□□□□□ -1.58
GARNL3-218ENST00000487565 DNAH1Q9P2D7 4330 aa5.18□□□□□ -1.58
GARNL3-218ENST00000487565 IGLV4-60A0A075B6I1 120 aa5.18□□□□□ -1.58
GARNL3-218ENST00000487565 IGLV4-3A0A075B6K6 122 aa5.18□□□□□ -1.58
GARNL3-218ENST00000487565 TRAV9-2A0A087WT02 112 aa5.18□□□□□ -1.58
GARNL3-218ENST00000487565 A0A1B0GUV1 79 aa5.18□□□□□ -1.58
GARNL3-218ENST00000487565 IGIPA6NJ69 53 aa5.18□□□□□ -1.58
GARNL3-218ENST00000487565 FABP4P15090 132 aa5.18□□□□□ -1.58
GARNL3-218ENST00000487565 SNRPEP62304 92 aaKnown RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms