RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 SLPIP03973 132 aa7.37□□□□□ -1.23
SPEN-205ENST00000487496 CAMPP49913 170 aa7.37□□□□□ -1.23
SPEN-205ENST00000487496 MRPL51Q4U2R6 128 aaKnown RBP7.37□□□□□ -1.23
SPEN-205ENST00000487496 FAM104BQ5XKR9 115 aa7.37□□□□□ -1.23
SPEN-205ENST00000487496 SDIM1Q6ZPB5 146 aa7.37□□□□□ -1.23
SPEN-205ENST00000487496 CHCHD10Q8WYQ3 142 aaPredicted RBP7.37□□□□□ -1.23
SPEN-205ENST00000487496 BTF3L4Q96K17 158 aa7.37□□□□□ -1.23
SPEN-205ENST00000487496 SUMO2P61956 95 aaKnown RBP7.36□□□□□ -1.23
SPEN-205ENST00000487496 C15orf56Q8N910 161 aa7.36□□□□□ -1.23
SPEN-205ENST00000487496 OR5A1Q8NGJ0 315 aa7.36□□□□□ -1.23
SPEN-205ENST00000487496 TMEM101Q96IK0 257 aa7.36□□□□□ -1.23
SPEN-205ENST00000487496 AP5S1Q9NUS5 200 aa7.36□□□□□ -1.23
SPEN-205ENST00000487496 A0A1B0GW15 77 aa7.35□□□□□ -1.23
SPEN-205ENST00000487496 C7orf77A4D0Y5 90 aa7.35□□□□□ -1.23
SPEN-205ENST00000487496 MRPL52Q86TS9 123 aaKnown RBP7.35□□□□□ -1.23
SPEN-205ENST00000487496 CDC42SE2Q9NRR3 84 aa7.35□□□□□ -1.23
SPEN-205ENST00000487496 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.35□□□□□ -1.23
SPEN-205ENST00000487496 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.34□□□□□ -1.23
SPEN-205ENST00000487496 LINC00959A0A1B0GUT2 108 aa7.34□□□□□ -1.23
SPEN-205ENST00000487496 LINC00862A6NCI5 91 aa7.34□□□□□ -1.23
SPEN-205ENST00000487496 PANO1I0J062 215 aa7.34□□□□□ -1.23
SPEN-205ENST00000487496 FCER1GP30273 86 aa7.34□□□□□ -1.23
SPEN-205ENST00000487496 FOXI1Q12951 378 aa7.34□□□□□ -1.23
SPEN-205ENST00000487496 MRPL54Q6P161 138 aaKnown RBP7.34□□□□□ -1.23
SPEN-205ENST00000487496 KIR2DL4Q99706 377 aa7.34□□□□□ -1.23
SPEN-205ENST00000487496 MYCBP2O75592 4640 aa7.33□□□□□ -1.24
SPEN-205ENST00000487496 TRBV24-1A0A075B6N3 115 aa7.33□□□□□ -1.24
SPEN-205ENST00000487496 IGHV3-64A0A075B6Q5 118 aa7.33□□□□□ -1.24
SPEN-205ENST00000487496 A0A1B0GXF2 115 aa7.33□□□□□ -1.24
SPEN-205ENST00000487496 PPP1R2P9O14990 202 aa7.33□□□□□ -1.24
SPEN-205ENST00000487496 CKS2P33552 79 aa7.33□□□□□ -1.24
SPEN-205ENST00000487496 XCL1P47992 114 aa7.33□□□□□ -1.24
SPEN-205ENST00000487496 KRTAP10-4P60372 401 aaPredicted RBP7.33□□□□□ -1.24
SPEN-205ENST00000487496 HBBP68871 147 aa7.33□□□□□ -1.24
SPEN-205ENST00000487496 ZNF664Q8N3J9 261 aa7.33□□□□□ -1.24
SPEN-205ENST00000487496 C20orf78Q9BR46 151 aa7.33□□□□□ -1.24
SPEN-205ENST00000487496 DMBT1Q9UGM3 2413 aaPredicted RBP7.33□□□□□ -1.24
SPEN-205ENST00000487496 GVQW2A0A096LPI5 108 aaPredicted RBP7.32□□□□□ -1.24
SPEN-205ENST00000487496 CCL25O15444 150 aa7.32□□□□□ -1.24
SPEN-205ENST00000487496 S100A8P05109 93 aa7.32□□□□□ -1.24
SPEN-205ENST00000487496 RAB14P61106 215 aa7.32□□□□□ -1.24
SPEN-205ENST00000487496 CIRBPQ14011 172 aaKnown RBP7.32□□□□□ -1.24
SPEN-205ENST00000487496 HIGD2BQ4VC39 106 aa7.32□□□□□ -1.24
SPEN-205ENST00000487496 UBE2D4Q9Y2X8 147 aa7.32□□□□□ -1.24
SPEN-205ENST00000487496 F8W036 122 aa7.31□□□□□ -1.24
SPEN-205ENST00000487496 TNFRSF6BO95407 300 aa7.31□□□□□ -1.24
SPEN-205ENST00000487496 RPL32P62910 135 aaKnown RBP7.31□□□□□ -1.24
SPEN-205ENST00000487496 SS18Q15532 418 aa7.31□□□□□ -1.24
SPEN-205ENST00000487496 CSDC2Q9Y534 153 aaKnown RBP7.31□□□□□ -1.24
SPEN-205ENST00000487496 D6R8Y8 96 aa7.3□□□□□ -1.24
SPEN-205ENST00000487496 J3QL48 77 aa7.3□□□□□ -1.24
SPEN-205ENST00000487496 CHTF8P0CG12 524 aa7.3□□□□□ -1.24
SPEN-205ENST00000487496 SMAGPQ0VAQ4 97 aa7.3□□□□□ -1.24
SPEN-205ENST00000487496 CD164L2Q6UWJ8 174 aa7.3□□□□□ -1.24
SPEN-205ENST00000487496 IGHV1-58A0A0C4DH39 117 aa7.29□□□□□ -1.24
SPEN-205ENST00000487496 NPYP01303 97 aa7.29□□□□□ -1.24
SPEN-205ENST00000487496 PPBPP02775 128 aa7.29□□□□□ -1.24
SPEN-205ENST00000487496 COX6A2Q02221 97 aa7.29□□□□□ -1.24
SPEN-205ENST00000487496 PNRC1Q12796 327 aaPredicted RBP7.29□□□□□ -1.24
SPEN-205ENST00000487496 ATP5L2Q7Z4Y8 100 aa7.29□□□□□ -1.24
SPEN-205ENST00000487496 DPH3Q96FX2 82 aa7.29□□□□□ -1.24
SPEN-205ENST00000487496 SMIM2Q9BVW6 85 aa7.29□□□□□ -1.24
SPEN-205ENST00000487496 HERC1Q15751 4861 aa7.28□□□□□ -1.24
SPEN-205ENST00000487496 A0A087WYN8 130 aa7.28□□□□□ -1.24
SPEN-205ENST00000487496 C1orf196B1AJZ1 125 aa7.28□□□□□ -1.24
SPEN-205ENST00000487496 PHOX2AO14813 284 aa7.28□□□□□ -1.24
SPEN-205ENST00000487496 TCAPO15273 167 aa7.28□□□□□ -1.24
SPEN-205ENST00000487496 RPL37AP61513 92 aaKnown RBP7.28□□□□□ -1.24
SPEN-205ENST00000487496 RNASE13Q5GAN3 156 aaKnown RBP7.28□□□□□ -1.24
SPEN-205ENST00000487496 CLLU1Q5K131 121 aa7.28□□□□□ -1.24
SPEN-205ENST00000487496 PRSS3P2Q8NHM4 247 aa7.28□□□□□ -1.24
SPEN-205ENST00000487496 SPACA4Q8TDM5 124 aa7.28□□□□□ -1.24
SPEN-205ENST00000487496 TMEM18Q96B42 140 aa7.28□□□□□ -1.24
SPEN-205ENST00000487496 LINC00526Q96FQ7 95 aa7.28□□□□□ -1.24
SPEN-205ENST00000487496 TIMM21Q9BVV7 248 aa7.28□□□□□ -1.24
SPEN-205ENST00000487496 KRTAP29-1A8MX34 341 aaPredicted RBP7.27□□□□□ -1.25
SPEN-205ENST00000487496 MT-ND4LP03901 98 aa7.27□□□□□ -1.25
SPEN-205ENST00000487496 RPL39P62891 51 aaKnown RBP7.27□□□□□ -1.25
SPEN-205ENST00000487496 TMEM136Q6ZRR5 245 aa7.27□□□□□ -1.25
SPEN-205ENST00000487496 Q6ZUT4 128 aa7.27□□□□□ -1.25
SPEN-205ENST00000487496 ORMDL3Q8N138 153 aa7.27□□□□□ -1.25
SPEN-205ENST00000487496 TRAV13-1A0A0B4J241 112 aa7.26□□□□□ -1.25
SPEN-205ENST00000487496 PRELID3AQ96N28 172 aa7.26□□□□□ -1.25
SPEN-205ENST00000487496 PLAC8Q9NZF1 115 aa7.26□□□□□ -1.25
SPEN-205ENST00000487496 IGKV2-24A0A0C4DH68 120 aa7.25□□□□□ -1.25
SPEN-205ENST00000487496 ZNF561-AS1K7EIQ3 104 aa7.25□□□□□ -1.25
SPEN-205ENST00000487496 COX7A2LO14548 114 aa7.25□□□□□ -1.25
SPEN-205ENST00000487496 MALP21145 153 aa7.25□□□□□ -1.25
SPEN-205ENST00000487496 HNRNPA3P51991 378 aaKnown RBP7.25□□□□□ -1.25
SPEN-205ENST00000487496 FAM104AQ969W3 186 aa7.25□□□□□ -1.25
SPEN-205ENST00000487496 CARD19Q96LW7 228 aa7.25□□□□□ -1.25
SPEN-205ENST00000487496 OPRPNQ99935 248 aaPredicted RBP7.25□□□□□ -1.25
SPEN-205ENST00000487496 SPANXA1Q9NS26 97 aa7.25□□□□□ -1.25
SPEN-205ENST00000487496 A0A096LNI7 61 aa7.24□□□□□ -1.25
SPEN-205ENST00000487496 IFITM2Q01629 132 aa7.24□□□□□ -1.25
SPEN-205ENST00000487496 SYCNQ0VAF6 134 aa7.24□□□□□ -1.25
SPEN-205ENST00000487496 MAJINQ3KP22 176 aa7.24□□□□□ -1.25
SPEN-205ENST00000487496 C5orf38Q86SI9 138 aa7.24□□□□□ -1.25
SPEN-205ENST00000487496 IGLV4-69A0A075B6H9 119 aa7.23□□□□□ -1.25
SPEN-205ENST00000487496 RAB5AP20339 215 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms