RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 FAM30AQ9NZY2 134 aa4.69□□□□□ -1.66
UBE4B-209ENST00000487244 A0A1B0GUV1 79 aa4.68□□□□□ -1.66
UBE4B-209ENST00000487244 A0A1B0GXF2 115 aa4.68□□□□□ -1.66
UBE4B-209ENST00000487244 USP17L23D6RBM5 183 aa4.68□□□□□ -1.66
UBE4B-209ENST00000487244 APCSP02743 223 aa4.68□□□□□ -1.66
UBE4B-209ENST00000487244 ADCYAP1P18509 176 aa4.68□□□□□ -1.66
UBE4B-209ENST00000487244 REG3AQ06141 175 aa4.68□□□□□ -1.66
UBE4B-209ENST00000487244 MIAQ16674 131 aa4.68□□□□□ -1.66
UBE4B-209ENST00000487244 MRPL51Q4U2R6 128 aaKnown RBP4.68□□□□□ -1.66
UBE4B-209ENST00000487244 NRACQ8N912 160 aa4.68□□□□□ -1.66
UBE4B-209ENST00000487244 ST20Q9HBF5 79 aa4.68□□□□□ -1.66
UBE4B-209ENST00000487244 COX11Q9Y6N1 276 aa4.68□□□□□ -1.66
UBE4B-209ENST00000487244 IGKV3OR2-268A0A0C4DH90 116 aa4.67□□□□□ -1.66
UBE4B-209ENST00000487244 TRBV27A0A0K0K1C4 114 aa4.67□□□□□ -1.66
UBE4B-209ENST00000487244 I3L3M4 83 aa4.67□□□□□ -1.66
UBE4B-209ENST00000487244 UBE2L6O14933 153 aa4.67□□□□□ -1.66
UBE4B-209ENST00000487244 FGF6P10767 208 aa4.67□□□□□ -1.66
UBE4B-209ENST00000487244 PMCHP20382 165 aa4.67□□□□□ -1.66
UBE4B-209ENST00000487244 POLR2KP53803 58 aaKnown RBP4.67□□□□□ -1.66
UBE4B-209ENST00000487244 FAM104BQ5XKR9 115 aa4.67□□□□□ -1.66
UBE4B-209ENST00000487244 SRRM2Q9UQ35 2752 aaKnown RBP4.66□□□□□ -1.66
UBE4B-209ENST00000487244 PRSS1P07477 247 aa4.66□□□□□ -1.66
UBE4B-209ENST00000487244 ESDP10768 282 aa4.66□□□□□ -1.66
UBE4B-209ENST00000487244 HBBP68871 147 aa4.66□□□□□ -1.66
UBE4B-209ENST00000487244 AMMECR1LQ6DCA0 310 aa4.66□□□□□ -1.66
UBE4B-209ENST00000487244 RNASEKQ6P5S7 137 aaKnown RBP4.66□□□□□ -1.66
UBE4B-209ENST00000487244 A0A1B0GW15 77 aa4.65□□□□□ -1.67
UBE4B-209ENST00000487244 D6R8Y8 96 aa4.65□□□□□ -1.67
UBE4B-209ENST00000487244 NPYP01303 97 aa4.65□□□□□ -1.67
UBE4B-209ENST00000487244 SMR3BP02814 79 aaPredicted RBP4.65□□□□□ -1.67
UBE4B-209ENST00000487244 SUMO2P61956 95 aaKnown RBP4.65□□□□□ -1.67
UBE4B-209ENST00000487244 PNRC1Q12796 327 aaPredicted RBP4.65□□□□□ -1.67
UBE4B-209ENST00000487244 Q6ZSA8 131 aa4.65□□□□□ -1.67
UBE4B-209ENST00000487244 TRAV8-4A0A0B4J246 113 aa4.64□□□□□ -1.67
UBE4B-209ENST00000487244 TMEM218A2RU14 115 aa4.64□□□□□ -1.67
UBE4B-209ENST00000487244 C7orf77A4D0Y5 90 aa4.64□□□□□ -1.67
UBE4B-209ENST00000487244 GAGE12HA6NDE8 117 aa4.64□□□□□ -1.67
UBE4B-209ENST00000487244 H7C423 109 aa4.64□□□□□ -1.67
UBE4B-209ENST00000487244 VCYO14598 125 aa4.64□□□□□ -1.67
UBE4B-209ENST00000487244 PPP1R2P9O14990 202 aa4.64□□□□□ -1.67
UBE4B-209ENST00000487244 TNFRSF6BO95407 300 aa4.64□□□□□ -1.67
UBE4B-209ENST00000487244 MT-ND4LP03901 98 aa4.64□□□□□ -1.67
UBE4B-209ENST00000487244 CKS2P33552 79 aa4.64□□□□□ -1.67
UBE4B-209ENST00000487244 PTTG1IPP53801 180 aa4.64□□□□□ -1.67
UBE4B-209ENST00000487244 COMMD7Q86VX2 200 aa4.64□□□□□ -1.67
UBE4B-209ENST00000487244 FLG2Q5D862 2391 aaPredicted RBP4.64□□□□□ -1.67
UBE4B-209ENST00000487244 TRBV24-1A0A075B6N3 115 aa4.63□□□□□ -1.67
UBE4B-209ENST00000487244 LINC00862A6NCI5 91 aa4.63□□□□□ -1.67
UBE4B-209ENST00000487244 F8W036 122 aa4.63□□□□□ -1.67
UBE4B-209ENST00000487244 S100A8P05109 93 aa4.63□□□□□ -1.67
UBE4B-209ENST00000487244 ZNF25P17030 456 aaPredicted RBP4.63□□□□□ -1.67
UBE4B-209ENST00000487244 FCER1GP30273 86 aa4.63□□□□□ -1.67
UBE4B-209ENST00000487244 C14orf177Q52M58 125 aa4.63□□□□□ -1.67
UBE4B-209ENST00000487244 RNASE13Q5GAN3 156 aaKnown RBP4.63□□□□□ -1.67
UBE4B-209ENST00000487244 Q5VSD8 79 aa4.63□□□□□ -1.67
UBE4B-209ENST00000487244 UQCC3Q6UW78 93 aa4.63□□□□□ -1.67
UBE4B-209ENST00000487244 ATP5L2Q7Z4Y8 100 aa4.63□□□□□ -1.67
UBE4B-209ENST00000487244 MRPL52Q86TS9 123 aaKnown RBP4.63□□□□□ -1.67
UBE4B-209ENST00000487244 C15orf56Q8N910 161 aa4.63□□□□□ -1.67
UBE4B-209ENST00000487244 OR5A1Q8NGJ0 315 aa4.63□□□□□ -1.67
UBE4B-209ENST00000487244 CHCHD10Q8WYQ3 142 aaPredicted RBP4.63□□□□□ -1.67
UBE4B-209ENST00000487244 SMIM2Q9BVW6 85 aa4.63□□□□□ -1.67
UBE4B-209ENST00000487244 LINC00959A0A1B0GUT2 108 aa4.62□□□□□ -1.67
UBE4B-209ENST00000487244 hDV102S1A0JD36 115 aa4.62□□□□□ -1.67
UBE4B-209ENST00000487244 EPM2AB3EWF7 344 aa4.62□□□□□ -1.67
UBE4B-209ENST00000487244 PANO1I0J062 215 aa4.62□□□□□ -1.67
UBE4B-209ENST00000487244 TCAPO15273 167 aa4.62□□□□□ -1.67
UBE4B-209ENST00000487244 PPP1R17O96001 155 aa4.62□□□□□ -1.67
UBE4B-209ENST00000487244 XCL1P47992 114 aa4.62□□□□□ -1.67
UBE4B-209ENST00000487244 RPL39P62891 51 aaKnown RBP4.62□□□□□ -1.67
UBE4B-209ENST00000487244 FOXI1Q12951 378 aa4.62□□□□□ -1.67
UBE4B-209ENST00000487244 Q6ZUT4 128 aa4.62□□□□□ -1.67
UBE4B-209ENST00000487244 SCXQ7RTU7 201 aa4.62□□□□□ -1.67
UBE4B-209ENST00000487244 FAM104AQ969W3 186 aa4.62□□□□□ -1.67
UBE4B-209ENST00000487244 BTF3L4Q96K17 158 aa4.62□□□□□ -1.67
UBE4B-209ENST00000487244 KIR2DL4Q99706 377 aa4.62□□□□□ -1.67
UBE4B-209ENST00000487244 C20orf78Q9BR46 151 aa4.62□□□□□ -1.67
UBE4B-209ENST00000487244 CDC42SE2Q9NRR3 84 aa4.62□□□□□ -1.67
UBE4B-209ENST00000487244 UBE2D4Q9Y2X8 147 aa4.62□□□□□ -1.67
UBE4B-209ENST00000487244 CCL25O15444 150 aa4.61□□□□□ -1.67
UBE4B-209ENST00000487244 RPL32P62910 135 aaKnown RBP4.61□□□□□ -1.67
UBE4B-209ENST00000487244 HIGD2BQ4VC39 106 aa4.61□□□□□ -1.67
UBE4B-209ENST00000487244 ORMDL3Q8N138 153 aa4.61□□□□□ -1.67
UBE4B-209ENST00000487244 ZNF664Q8N3J9 261 aa4.61□□□□□ -1.67
UBE4B-209ENST00000487244 TMEM101Q96IK0 257 aa4.61□□□□□ -1.67
UBE4B-209ENST00000487244 PRELID3AQ96N28 172 aa4.61□□□□□ -1.67
UBE4B-209ENST00000487244 FAT1Q14517 4588 aa4.61□□□□□ -1.67
UBE4B-209ENST00000487244 LOC389332A0A1B0GUA5 103 aa4.6□□□□□ -1.67
UBE4B-209ENST00000487244 PHOX2AO14813 284 aa4.6□□□□□ -1.67
UBE4B-209ENST00000487244 PPBPP02775 128 aa4.6□□□□□ -1.67
UBE4B-209ENST00000487244 CNBPP62633 177 aaKnown RBP4.6□□□□□ -1.67
UBE4B-209ENST00000487244 TMEM136Q6ZRR5 245 aa4.6□□□□□ -1.67
UBE4B-209ENST00000487244 C9orf163Q8N9P6 203 aa4.6□□□□□ -1.67
UBE4B-209ENST00000487244 CIRBP-AS1Q8TBR5 109 aa4.6□□□□□ -1.67
UBE4B-209ENST00000487244 LINC00526Q96FQ7 95 aa4.6□□□□□ -1.67
UBE4B-209ENST00000487244 OPRPNQ99935 248 aaPredicted RBP4.6□□□□□ -1.67
UBE4B-209ENST00000487244 CHAC1Q9BUX1 264 aa4.6□□□□□ -1.67
UBE4B-209ENST00000487244 SEC11CQ9BY50 192 aa4.6□□□□□ -1.67
UBE4B-209ENST00000487244 VPS13BQ7Z7G8 4022 aa4.59□□□□□ -1.67
UBE4B-209ENST00000487244 GVQW2A0A096LPI5 108 aaPredicted RBP4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms