RNA–Protein interactions for RNA: ENST00000486429.1

CLDN11-206, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 998 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-206ENST00000486429 AP5S1Q9NUS5 200 aa11.85□□□□□ -0.51
CLDN11-206ENST00000486429 CNBPP62633 177 aaKnown RBP11.84□□□□□ -0.51
CLDN11-206ENST00000486429 CHCHD10Q8WYQ3 142 aaPredicted RBP11.84□□□□□ -0.51
CLDN11-206ENST00000486429 PLA2G1BP04054 148 aaKnown RBP11.83□□□□□ -0.52
CLDN11-206ENST00000486429 MRPL52Q86TS9 123 aaKnown RBP11.83□□□□□ -0.52
CLDN11-206ENST00000486429 CIRBP-AS1Q8TBR5 109 aa11.83□□□□□ -0.52
CLDN11-206ENST00000486429 KIR2DL4Q99706 377 aa11.83□□□□□ -0.52
CLDN11-206ENST00000486429 A0A1B0GXF2 115 aa11.82□□□□□ -0.52
CLDN11-206ENST00000486429 F8W036 122 aa11.82□□□□□ -0.52
CLDN11-206ENST00000486429 CKS2P33552 79 aa11.82□□□□□ -0.52
CLDN11-206ENST00000486429 CFAP161Q6P656 301 aa11.82□□□□□ -0.52
CLDN11-206ENST00000486429 C15orf56Q8N910 161 aa11.82□□□□□ -0.52
CLDN11-206ENST00000486429 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.81□□□□□ -0.52
CLDN11-206ENST00000486429 PNRC1Q12796 327 aaPredicted RBP11.81□□□□□ -0.52
CLDN11-206ENST00000486429 SLC7A5P1Q8MH63 180 aa11.81□□□□□ -0.52
CLDN11-206ENST00000486429 SMAGPQ0VAQ4 97 aa11.8□□□□□ -0.52
CLDN11-206ENST00000486429 ATP5L2Q7Z4Y8 100 aa11.8□□□□□ -0.52
CLDN11-206ENST00000486429 C20orf78Q9BR46 151 aa11.8□□□□□ -0.52
CLDN11-206ENST00000486429 LINC00959A0A1B0GUT2 108 aa11.79□□□□□ -0.52
CLDN11-206ENST00000486429 D6R8Y8 96 aa11.79□□□□□ -0.52
CLDN11-206ENST00000486429 XCL1P47992 114 aa11.79□□□□□ -0.52
CLDN11-206ENST00000486429 CDC42SE2Q9NRR3 84 aa11.79□□□□□ -0.52
CLDN11-206ENST00000486429 TRBV24-1A0A075B6N3 115 aa11.78□□□□□ -0.52
CLDN11-206ENST00000486429 IGHV3-64A0A075B6Q5 118 aa11.78□□□□□ -0.52
CLDN11-206ENST00000486429 CCL25O15444 150 aa11.78□□□□□ -0.52
CLDN11-206ENST00000486429 TNFRSF6BO95407 300 aa11.78□□□□□ -0.52
CLDN11-206ENST00000486429 RPL32P62910 135 aaKnown RBP11.78□□□□□ -0.52
CLDN11-206ENST00000486429 FOXI1Q12951 378 aa11.78□□□□□ -0.52
CLDN11-206ENST00000486429 HIGD2BQ4VC39 106 aa11.78□□□□□ -0.52
CLDN11-206ENST00000486429 UQCC3Q6UW78 93 aa11.78□□□□□ -0.52
CLDN11-206ENST00000486429 ZNF664Q8N3J9 261 aa11.78□□□□□ -0.52
CLDN11-206ENST00000486429 GVQW2A0A096LPI5 108 aaPredicted RBP11.77□□□□□ -0.53
CLDN11-206ENST00000486429 TCAPO15273 167 aa11.77□□□□□ -0.53
CLDN11-206ENST00000486429 MT-ND4LP03901 98 aa11.77□□□□□ -0.53
CLDN11-206ENST00000486429 SS18Q15532 418 aa11.77□□□□□ -0.53
CLDN11-206ENST00000486429 SDIM1Q6ZPB5 146 aa11.77□□□□□ -0.53
CLDN11-206ENST00000486429 SMIM2Q9BVW6 85 aa11.77□□□□□ -0.53
CLDN11-206ENST00000486429 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.77□□□□□ -0.53
CLDN11-206ENST00000486429 FLG2Q5D862 2391 aaPredicted RBP11.77□□□□□ -0.53
CLDN11-206ENST00000486429 DMBT1Q9UGM3 2413 aaPredicted RBP11.77□□□□□ -0.53
CLDN11-206ENST00000486429 NPYP01303 97 aa11.76□□□□□ -0.53
CLDN11-206ENST00000486429 PPBPP02775 128 aa11.76□□□□□ -0.53
CLDN11-206ENST00000486429 SLPIP03973 132 aa11.76□□□□□ -0.53
CLDN11-206ENST00000486429 TMEM18Q96B42 140 aa11.76□□□□□ -0.53
CLDN11-206ENST00000486429 ANAPC16Q96DE5 110 aa11.76□□□□□ -0.53
CLDN11-206ENST00000486429 UBE2D4Q9Y2X8 147 aa11.76□□□□□ -0.53
CLDN11-206ENST00000486429 CSDC2Q9Y534 153 aaKnown RBP11.76□□□□□ -0.53
CLDN11-206ENST00000486429 PHOX2AO14813 284 aa11.75□□□□□ -0.53
CLDN11-206ENST00000486429 ORMDL3Q8N138 153 aa11.75□□□□□ -0.53
CLDN11-206ENST00000486429 MYCBP2O75592 4640 aa11.75□□□□□ -0.53
CLDN11-206ENST00000486429 IGHV1-58A0A0C4DH39 117 aa11.73□□□□□ -0.53
CLDN11-206ENST00000486429 PANO1I0J062 215 aa11.73□□□□□ -0.53
CLDN11-206ENST00000486429 CD164L2Q6UWJ8 174 aa11.73□□□□□ -0.53
CLDN11-206ENST00000486429 Q6ZUT4 128 aa11.73□□□□□ -0.53
CLDN11-206ENST00000486429 TIMM21Q9BVV7 248 aa11.73□□□□□ -0.53
CLDN11-206ENST00000486429 ATP6V1G1O75348 118 aa11.72□□□□□ -0.53
CLDN11-206ENST00000486429 CIRBPQ14011 172 aaKnown RBP11.72□□□□□ -0.53
CLDN11-206ENST00000486429 RNASE13Q5GAN3 156 aaKnown RBP11.72□□□□□ -0.53
CLDN11-206ENST00000486429 C1orf196B1AJZ1 125 aa11.71□□□□□ -0.53
CLDN11-206ENST00000486429 TMEM136Q6ZRR5 245 aa11.71□□□□□ -0.53
CLDN11-206ENST00000486429 PRELID3AQ96N28 172 aa11.71□□□□□ -0.53
CLDN11-206ENST00000486429 CHTF8P0CG12 524 aa11.7□□□□□ -0.54
CLDN11-206ENST00000486429 RPL39P62891 51 aaKnown RBP11.7□□□□□ -0.54
CLDN11-206ENST00000486429 TRAV13-1A0A0B4J241 112 aa11.69□□□□□ -0.54
CLDN11-206ENST00000486429 TMEM218A2RU14 115 aa11.69□□□□□ -0.54
CLDN11-206ENST00000486429 KRTAP10-4P60372 401 aaPredicted RBP11.69□□□□□ -0.54
CLDN11-206ENST00000486429 SPACA4Q8TDM5 124 aa11.69□□□□□ -0.54
CLDN11-206ENST00000486429 SPANXA1Q9NS26 97 aa11.69□□□□□ -0.54
CLDN11-206ENST00000486429 COX7A2LO14548 114 aa11.68□□□□□ -0.54
CLDN11-206ENST00000486429 ADCYAP1P18509 176 aa11.68□□□□□ -0.54
CLDN11-206ENST00000486429 MALP21145 153 aa11.68□□□□□ -0.54
CLDN11-206ENST00000486429 RPL37AP61513 92 aaKnown RBP11.68□□□□□ -0.54
CLDN11-206ENST00000486429 COX6A2Q02221 97 aa11.68□□□□□ -0.54
CLDN11-206ENST00000486429 LAMTOR2Q9Y2Q5 125 aa11.68□□□□□ -0.54
CLDN11-206ENST00000486429 RAB5AP20339 215 aa11.67□□□□□ -0.54
CLDN11-206ENST00000486429 DPH3Q96FX2 82 aa11.67□□□□□ -0.54
CLDN11-206ENST00000486429 ZNF561-AS1K7EIQ3 104 aa11.66□□□□□ -0.54
CLDN11-206ENST00000486429 LINC00526Q96FQ7 95 aa11.66□□□□□ -0.54
CLDN11-206ENST00000486429 CARD19Q96LW7 228 aa11.66□□□□□ -0.54
CLDN11-206ENST00000486429 MAP1LC3AQ9H492 121 aa11.66□□□□□ -0.54
CLDN11-206ENST00000486429 PKIGQ9Y2B9 76 aa11.66□□□□□ -0.54
CLDN11-206ENST00000486429 A0A087WYN8 130 aa11.65□□□□□ -0.54
CLDN11-206ENST00000486429 S100A1P23297 94 aa11.65□□□□□ -0.54
CLDN11-206ENST00000486429 PRSS3P2Q8NHM4 247 aa11.65□□□□□ -0.54
CLDN11-206ENST00000486429 IGKV2-24A0A0C4DH68 120 aa11.64□□□□□ -0.55
CLDN11-206ENST00000486429 IFI27P40305 119 aaPredicted RBP11.64□□□□□ -0.55
CLDN11-206ENST00000486429 MRPS36P82909 103 aaKnown RBP11.64□□□□□ -0.55
CLDN11-206ENST00000486429 IMMP2LQ96T52 175 aa11.64□□□□□ -0.55
CLDN11-206ENST00000486429 SEC11CQ9BY50 192 aa11.64□□□□□ -0.55
CLDN11-206ENST00000486429 HERC1Q15751 4861 aa11.64□□□□□ -0.55
CLDN11-206ENST00000486429 LOC389332A0A1B0GUA5 103 aa11.63□□□□□ -0.55
CLDN11-206ENST00000486429 IFITM10A6NMD0 228 aa11.63□□□□□ -0.55
CLDN11-206ENST00000486429 SYCNQ0VAF6 134 aa11.63□□□□□ -0.55
CLDN11-206ENST00000486429 CTDSP1Q9GZU7 261 aa11.63□□□□□ -0.55
CLDN11-206ENST00000486429 PLAC8Q9NZF1 115 aa11.63□□□□□ -0.55
CLDN11-206ENST00000486429 PRSS47A8MTI9 375 aa11.62□□□□□ -0.55
CLDN11-206ENST00000486429 J3QL48 77 aa11.62□□□□□ -0.55
CLDN11-206ENST00000486429 MAJINQ3KP22 176 aa11.62□□□□□ -0.55
CLDN11-206ENST00000486429 C10orf91Q5T1B1 145 aa11.62□□□□□ -0.55
CLDN11-206ENST00000486429 C5orf38Q86SI9 138 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms