RNA–Protein interactions for RNA: ENST00000485983.6

SRGAP3-207, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best)

Gene SRGAP3, Length 5,677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-207ENST00000485983 C20orf173Q96LM9 149 aa7.87□□□□□ -1.15
SRGAP3-207ENST00000485983 CD164L2Q6UWJ8 174 aa7.87□□□□□ -1.15
SRGAP3-207ENST00000485983 C10orf99Q6UWK7 81 aa7.87□□□□□ -1.15
SRGAP3-207ENST00000485983 CEP350Q5VT06 3117 aa7.86□□□□□ -1.15
SRGAP3-207ENST00000485983 IGKV2-28A0A075B6P5 120 aa7.86□□□□□ -1.15
SRGAP3-207ENST00000485983 TRAV23DV6A0A075B6W5 121 aa7.86□□□□□ -1.15
SRGAP3-207ENST00000485983 TEX49A0A1B0GTD5 131 aa7.86□□□□□ -1.15
SRGAP3-207ENST00000485983 IGKV2D-28P01615 120 aa7.86□□□□□ -1.15
SRGAP3-207ENST00000485983 LYPD6Q86Y78 171 aa7.86□□□□□ -1.15
SRGAP3-207ENST00000485983 SMR3AQ99954 134 aa7.86□□□□□ -1.15
SRGAP3-207ENST00000485983 M0R378 163 aa7.86□□□□□ -1.15
SRGAP3-207ENST00000485983 OXLD1Q5BKU9 147 aa7.86□□□□□ -1.15
SRGAP3-207ENST00000485983 PRR15LQ9BU68 103 aa7.85□□□□□ -1.15
SRGAP3-207ENST00000485983 TNRC6AQ8NDV7 1962 aaKnown RBP7.85□□□□□ -1.15
SRGAP3-207ENST00000485983 IGLC6P0CF74 106 aa7.85□□□□□ -1.15
SRGAP3-207ENST00000485983 HRCT1Q6UXD1 115 aa7.85□□□□□ -1.15
SRGAP3-207ENST00000485983 IGLV4-3A0A075B6K6 122 aa7.85□□□□□ -1.15
SRGAP3-207ENST00000485983 CCKP06307 115 aa7.85□□□□□ -1.15
SRGAP3-207ENST00000485983 DSCAMO60469 2012 aa7.85□□□□□ -1.15
SRGAP3-207ENST00000485983 A0A0J9YWU9 116 aa7.85□□□□□ -1.15
SRGAP3-207ENST00000485983 SPATA12Q7Z6I5 190 aa7.85□□□□□ -1.15
SRGAP3-207ENST00000485983 C6orf99Q4VX62 202 aa7.85□□□□□ -1.15
SRGAP3-207ENST00000485983 PLAC8L1A1L4L8 177 aa7.84□□□□□ -1.15
SRGAP3-207ENST00000485983 J3KT08 172 aa7.84□□□□□ -1.15
SRGAP3-207ENST00000485983 NANOS2P60321 138 aaKnown RBP7.84□□□□□ -1.15
SRGAP3-207ENST00000485983 SERP1Q9Y6X1 66 aa7.84□□□□□ -1.15
SRGAP3-207ENST00000485983 CLUHP3Q96NS8 147 aa7.84□□□□□ -1.15
SRGAP3-207ENST00000485983 PLXNB3Q9ULL4 1909 aa7.84□□□□□ -1.15
SRGAP3-207ENST00000485983 FREM1Q5H8C1 2179 aa7.84□□□□□ -1.15
SRGAP3-207ENST00000485983 DSCAML1Q8TD84 2053 aa7.84□□□□□ -1.15
SRGAP3-207ENST00000485983 M0QY20 66 aa7.84□□□□□ -1.15
SRGAP3-207ENST00000485983 C22orf34Q6ZV56 151 aa7.84□□□□□ -1.15
SRGAP3-207ENST00000485983 DCANP1Q8TF63 244 aa7.84□□□□□ -1.15
SRGAP3-207ENST00000485983 ZFAND3Q9H8U3 227 aa7.84□□□□□ -1.15
SRGAP3-207ENST00000485983 TNRC6BQ9UPQ9 1833 aaKnown RBP7.83□□□□□ -1.16
SRGAP3-207ENST00000485983 CDPF1Q6NVV7 123 aa7.83□□□□□ -1.16
SRGAP3-207ENST00000485983 SCXQ7RTU7 201 aa7.83□□□□□ -1.16
SRGAP3-207ENST00000485983 LINC00308Q8TCZ7 52 aa7.83□□□□□ -1.16
SRGAP3-207ENST00000485983 ZNF22P17026 224 aaPredicted RBP7.83□□□□□ -1.16
SRGAP3-207ENST00000485983 PLA2G2EQ9NZK7 142 aa7.83□□□□□ -1.16
SRGAP3-207ENST00000485983 IGLV9-49A0A0B4J1Y8 123 aa7.83□□□□□ -1.16
SRGAP3-207ENST00000485983 IGHV4-30-4P0DP06 118 aa7.83□□□□□ -1.16
SRGAP3-207ENST00000485983 ZNF462Q96JM2 2506 aa7.83□□□□□ -1.16
SRGAP3-207ENST00000485983 NDUFA7O95182 113 aa7.83□□□□□ -1.16
SRGAP3-207ENST00000485983 SLPIP03973 132 aa7.83□□□□□ -1.16
SRGAP3-207ENST00000485983 TMEM223A0PJW6 202 aa7.82□□□□□ -1.16
SRGAP3-207ENST00000485983 PIK3CD-AS1Q5SR53 167 aa7.82□□□□□ -1.16
SRGAP3-207ENST00000485983 GDF5OSQ5U4N7 250 aa7.82□□□□□ -1.16
SRGAP3-207ENST00000485983 SPTSSBQ8NFR3 76 aa7.82□□□□□ -1.16
SRGAP3-207ENST00000485983 ATP5EP2Q5VTU8 51 aa7.82□□□□□ -1.16
SRGAP3-207ENST00000485983 TMEM131Q92545 1883 aa7.82□□□□□ -1.16
SRGAP3-207ENST00000485983 MRGPRG-AS1Q2M3A8 158 aa7.82□□□□□ -1.16
SRGAP3-207ENST00000485983 WFDC10AQ9H1F0 79 aa7.82□□□□□ -1.16
SRGAP3-207ENST00000485983 PRO3102Q9H379 93 aa7.81□□□□□ -1.16
SRGAP3-207ENST00000485983 NCOA6Q14686 2063 aaPredicted RBP7.81□□□□□ -1.16
SRGAP3-207ENST00000485983 P0C879 139 aa7.81□□□□□ -1.16
SRGAP3-207ENST00000485983 RPL28P46779 137 aaKnown RBP7.81□□□□□ -1.16
SRGAP3-207ENST00000485983 A0A1B0GXF2 115 aa7.81□□□□□ -1.16
SRGAP3-207ENST00000485983 PROK1P58294 105 aa7.81□□□□□ -1.16
SRGAP3-207ENST00000485983 TDRG1Q3Y452 100 aa7.81□□□□□ -1.16
SRGAP3-207ENST00000485983 Q8N9L7 120 aa7.81□□□□□ -1.16
SRGAP3-207ENST00000485983 LINC00526Q96FQ7 95 aa7.81□□□□□ -1.16
SRGAP3-207ENST00000485983 C3orf84H3BNL1 204 aa7.8□□□□□ -1.16
SRGAP3-207ENST00000485983 LINC00959A0A1B0GUT2 108 aa7.8□□□□□ -1.16
SRGAP3-207ENST00000485983 RPL37AP8A6NKH3 93 aa7.8□□□□□ -1.16
SRGAP3-207ENST00000485983 PTH2Q96A98 100 aa7.8□□□□□ -1.16
SRGAP3-207ENST00000485983 PYGO1Q9Y3Y4 419 aa7.8□□□□□ -1.16
SRGAP3-207ENST00000485983 C20orf197Q8N268 126 aa7.79□□□□□ -1.16
SRGAP3-207ENST00000485983 FRMD6-AS1P0C7T7 363 aa7.79□□□□□ -1.16
SRGAP3-207ENST00000485983 PIEZO2Q9H5I5 2752 aa7.79□□□□□ -1.16
SRGAP3-207ENST00000485983 LTBP2Q14767 1821 aa7.79□□□□□ -1.16
SRGAP3-207ENST00000485983 Q6ZQY7 126 aa7.78□□□□□ -1.16
SRGAP3-207ENST00000485983 C18orf65Q6ZTR6 163 aa7.78□□□□□ -1.16
SRGAP3-207ENST00000485983 ENHOQ6UWT2 76 aa7.78□□□□□ -1.16
SRGAP3-207ENST00000485983 WFDC13Q8IUB5 93 aa7.78□□□□□ -1.16
SRGAP3-207ENST00000485983 MLST8Q9BVC4 326 aa7.78□□□□□ -1.16
SRGAP3-207ENST00000485983 DENND4AQ7Z401 1863 aa7.78□□□□□ -1.16
SRGAP3-207ENST00000485983 IGLV5-52A0A0A0MRZ9 124 aa7.78□□□□□ -1.16
SRGAP3-207ENST00000485983 TRBV6-5A0A0K0K1A5 114 aa7.78□□□□□ -1.16
SRGAP3-207ENST00000485983 TRBV27A0A0K0K1C4 114 aa7.77□□□□□ -1.17
SRGAP3-207ENST00000485983 LOC100131303A0A0U1RQF7 123 aa7.77□□□□□ -1.17
SRGAP3-207ENST00000485983 SDIM1Q6ZPB5 146 aa7.77□□□□□ -1.17
SRGAP3-207ENST00000485983 IGF2RP11717 2491 aa7.77□□□□□ -1.17
SRGAP3-207ENST00000485983 MUC7Q8TAX7 377 aa7.77□□□□□ -1.17
SRGAP3-207ENST00000485983 BRK1Q8WUW1 75 aa7.77□□□□□ -1.17
SRGAP3-207ENST00000485983 MBD6Q96DN6 1003 aa7.77□□□□□ -1.17
SRGAP3-207ENST00000485983 IGLV2-8P01709 118 aa7.77□□□□□ -1.17
SRGAP3-207ENST00000485983 JMJD1CQ15652 2540 aa7.77□□□□□ -1.17
SRGAP3-207ENST00000485983 IGLV1-40P01703 118 aa7.76□□□□□ -1.17
SRGAP3-207ENST00000485983 BRWD1-AS2P59051 145 aa7.76□□□□□ -1.17
SRGAP3-207ENST00000485983 COX17Q14061 63 aa7.76□□□□□ -1.17
SRGAP3-207ENST00000485983 C10orf25Q5T742 122 aa7.76□□□□□ -1.17
SRGAP3-207ENST00000485983 C1orf229Q6ZS94 237 aaPredicted RBP7.76□□□□□ -1.17
SRGAP3-207ENST00000485983 MED12LQ86YW9 2145 aa7.76□□□□□ -1.17
SRGAP3-207ENST00000485983 Q6ZVQ6 151 aa7.75□□□□□ -1.17
SRGAP3-207ENST00000485983 Q8N6K4 173 aa7.75□□□□□ -1.17
SRGAP3-207ENST00000485983 C11orf1Q9H5F2 150 aa7.75□□□□□ -1.17
SRGAP3-207ENST00000485983 U3KQK5 164 aa7.75□□□□□ -1.17
SRGAP3-207ENST00000485983 CHCHD7Q9BUK0 85 aa7.75□□□□□ -1.17
SRGAP3-207ENST00000485983 PRRC2AP48634 2157 aaKnown RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms