RNA–Protein interactions for RNA: ENST00000485870.1

COL1A1-206, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 403 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-206ENST00000485870 MT-ND4LP03901 98 aa11.92□□□□□ -0.5
COL1A1-206ENST00000485870 MRPL52Q86TS9 123 aaKnown RBP11.92□□□□□ -0.5
COL1A1-206ENST00000485870 C20orf78Q9BR46 151 aa11.92□□□□□ -0.5
COL1A1-206ENST00000485870 TNFRSF6BO95407 300 aa11.91□□□□□ -0.5
COL1A1-206ENST00000485870 ATP5L2Q7Z4Y8 100 aa11.91□□□□□ -0.5
COL1A1-206ENST00000485870 ANAPC16Q96DE5 110 aa11.91□□□□□ -0.5
COL1A1-206ENST00000485870 CHAC1Q9BUX1 264 aa11.91□□□□□ -0.5
COL1A1-206ENST00000485870 TRBV24-1A0A075B6N3 115 aa11.9□□□□□ -0.5
COL1A1-206ENST00000485870 INAFM2P0DMQ5 153 aa11.9□□□□□ -0.5
COL1A1-206ENST00000485870 C15orf56Q8N910 161 aa11.9□□□□□ -0.5
COL1A1-206ENST00000485870 C9orf163Q8N9P6 203 aa11.9□□□□□ -0.5
COL1A1-206ENST00000485870 CDC42SE2Q9NRR3 84 aa11.9□□□□□ -0.5
COL1A1-206ENST00000485870 AP5S1Q9NUS5 200 aa11.9□□□□□ -0.5
COL1A1-206ENST00000485870 LINC00959A0A1B0GUT2 108 aa11.89□□□□□ -0.51
COL1A1-206ENST00000485870 NPYP01303 97 aa11.89□□□□□ -0.51
COL1A1-206ENST00000485870 XCL1P47992 114 aa11.89□□□□□ -0.51
COL1A1-206ENST00000485870 CFAP161Q6P656 301 aa11.89□□□□□ -0.51
COL1A1-206ENST00000485870 LINC00528Q8N1L1 170 aa11.89□□□□□ -0.51
COL1A1-206ENST00000485870 SRRM2Q9UQ35 2752 aaKnown RBP11.88□□□□□ -0.51
COL1A1-206ENST00000485870 CCL25O15444 150 aa11.88□□□□□ -0.51
COL1A1-206ENST00000485870 CNBPP62633 177 aaKnown RBP11.88□□□□□ -0.51
COL1A1-206ENST00000485870 RPL32P62910 135 aaKnown RBP11.88□□□□□ -0.51
COL1A1-206ENST00000485870 FOXI1Q12951 378 aa11.88□□□□□ -0.51
COL1A1-206ENST00000485870 HIGD2BQ4VC39 106 aa11.88□□□□□ -0.51
COL1A1-206ENST00000485870 ZNF664Q8N3J9 261 aa11.88□□□□□ -0.51
COL1A1-206ENST00000485870 CIRBP-AS1Q8TBR5 109 aa11.88□□□□□ -0.51
COL1A1-206ENST00000485870 SMIM2Q9BVW6 85 aa11.88□□□□□ -0.51
COL1A1-206ENST00000485870 PPBPP02775 128 aa11.87□□□□□ -0.51
COL1A1-206ENST00000485870 UQCC3Q6UW78 93 aa11.87□□□□□ -0.51
COL1A1-206ENST00000485870 UBE2D4Q9Y2X8 147 aa11.87□□□□□ -0.51
COL1A1-206ENST00000485870 SLPIP03973 132 aa11.86□□□□□ -0.51
COL1A1-206ENST00000485870 ADCYAP1P18509 176 aa11.86□□□□□ -0.51
COL1A1-206ENST00000485870 SMAGPQ0VAQ4 97 aa11.86□□□□□ -0.51
COL1A1-206ENST00000485870 SS18Q15532 418 aa11.86□□□□□ -0.51
COL1A1-206ENST00000485870 RNASE13Q5GAN3 156 aaKnown RBP11.86□□□□□ -0.51
COL1A1-206ENST00000485870 ORMDL3Q8N138 153 aa11.86□□□□□ -0.51
COL1A1-206ENST00000485870 FLG2Q5D862 2391 aaPredicted RBP11.85□□□□□ -0.51
COL1A1-206ENST00000485870 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.85□□□□□ -0.51
COL1A1-206ENST00000485870 TMEM218A2RU14 115 aa11.85□□□□□ -0.51
COL1A1-206ENST00000485870 PHOX2AO14813 284 aa11.85□□□□□ -0.51
COL1A1-206ENST00000485870 TMEM136Q6ZRR5 245 aa11.85□□□□□ -0.51
COL1A1-206ENST00000485870 TMEM18Q96B42 140 aa11.85□□□□□ -0.51
COL1A1-206ENST00000485870 PRELID3AQ96N28 172 aa11.85□□□□□ -0.51
COL1A1-206ENST00000485870 IGHV3-64A0A075B6Q5 118 aa11.84□□□□□ -0.51
COL1A1-206ENST00000485870 TCAPO15273 167 aa11.84□□□□□ -0.51
COL1A1-206ENST00000485870 RPL39P62891 51 aaKnown RBP11.84□□□□□ -0.51
COL1A1-206ENST00000485870 SDIM1Q6ZPB5 146 aa11.84□□□□□ -0.51
COL1A1-206ENST00000485870 Q6ZUT4 128 aa11.84□□□□□ -0.51
COL1A1-206ENST00000485870 CSDC2Q9Y534 153 aaKnown RBP11.84□□□□□ -0.51
COL1A1-206ENST00000485870 PLA2G1BP04054 148 aaKnown RBP11.83□□□□□ -0.52
COL1A1-206ENST00000485870 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.83□□□□□ -0.52
COL1A1-206ENST00000485870 PANO1I0J062 215 aa11.82□□□□□ -0.52
COL1A1-206ENST00000485870 CD164L2Q6UWJ8 174 aa11.82□□□□□ -0.52
COL1A1-206ENST00000485870 COMMD7Q86VX2 200 aa11.82□□□□□ -0.52
COL1A1-206ENST00000485870 TIMM21Q9BVV7 248 aa11.82□□□□□ -0.52
COL1A1-206ENST00000485870 GVQW2A0A096LPI5 108 aaPredicted RBP11.81□□□□□ -0.52
COL1A1-206ENST00000485870 TRAV13-1A0A0B4J241 112 aa11.81□□□□□ -0.52
COL1A1-206ENST00000485870 MYCBP2O75592 4640 aa11.8□□□□□ -0.52
COL1A1-206ENST00000485870 IGHV1-58A0A0C4DH39 117 aa11.8□□□□□ -0.52
COL1A1-206ENST00000485870 C1orf196B1AJZ1 125 aa11.8□□□□□ -0.52
COL1A1-206ENST00000485870 LOC389332A0A1B0GUA5 103 aa11.79□□□□□ -0.52
COL1A1-206ENST00000485870 RAB5AP20339 215 aa11.79□□□□□ -0.52
COL1A1-206ENST00000485870 SEC11CQ9BY50 192 aa11.79□□□□□ -0.52
COL1A1-206ENST00000485870 LINC00526Q96FQ7 95 aa11.78□□□□□ -0.52
COL1A1-206ENST00000485870 IMMP2LQ96T52 175 aa11.78□□□□□ -0.52
COL1A1-206ENST00000485870 MAP1LC3AQ9H492 121 aa11.78□□□□□ -0.52
COL1A1-206ENST00000485870 SPANXA1Q9NS26 97 aa11.78□□□□□ -0.52
COL1A1-206ENST00000485870 LAMTOR2Q9Y2Q5 125 aa11.78□□□□□ -0.52
COL1A1-206ENST00000485870 CHTF8P0CG12 524 aa11.77□□□□□ -0.53
COL1A1-206ENST00000485870 OPRPNQ99935 248 aaPredicted RBP11.77□□□□□ -0.53
COL1A1-206ENST00000485870 CTDSP1Q9GZU7 261 aa11.77□□□□□ -0.53
COL1A1-206ENST00000485870 COX7A2LO14548 114 aa11.76□□□□□ -0.53
COL1A1-206ENST00000485870 MALP21145 153 aa11.76□□□□□ -0.53
COL1A1-206ENST00000485870 COX6A2Q02221 97 aa11.76□□□□□ -0.53
COL1A1-206ENST00000485870 FAM104AQ969W3 186 aa11.76□□□□□ -0.53
COL1A1-206ENST00000485870 DPH3Q96FX2 82 aa11.76□□□□□ -0.53
COL1A1-206ENST00000485870 PRSS47A8MTI9 375 aa11.75□□□□□ -0.53
COL1A1-206ENST00000485870 CIRBPQ14011 172 aaKnown RBP11.75□□□□□ -0.53
COL1A1-206ENST00000485870 DMBT1Q9UGM3 2413 aaPredicted RBP11.75□□□□□ -0.53
COL1A1-206ENST00000485870 ZNF561-AS1K7EIQ3 104 aa11.74□□□□□ -0.53
COL1A1-206ENST00000485870 MRPS36P82909 103 aaKnown RBP11.74□□□□□ -0.53
COL1A1-206ENST00000485870 C5orf38Q86SI9 138 aa11.74□□□□□ -0.53
COL1A1-206ENST00000485870 Q8N8P6 123 aa11.74□□□□□ -0.53
COL1A1-206ENST00000485870 PRSS3P2Q8NHM4 247 aa11.74□□□□□ -0.53
COL1A1-206ENST00000485870 SPACA4Q8TDM5 124 aa11.74□□□□□ -0.53
COL1A1-206ENST00000485870 IFITM10A6NMD0 228 aa11.73□□□□□ -0.53
COL1A1-206ENST00000485870 IFI27P40305 119 aaPredicted RBP11.73□□□□□ -0.53
COL1A1-206ENST00000485870 TRAV9-1A0A075B6T8 112 aa11.72□□□□□ -0.53
COL1A1-206ENST00000485870 IGKV2-24A0A0C4DH68 120 aa11.72□□□□□ -0.53
COL1A1-206ENST00000485870 S100PP25815 95 aa11.72□□□□□ -0.53
COL1A1-206ENST00000485870 KRTAP10-4P60372 401 aaPredicted RBP11.72□□□□□ -0.53
COL1A1-206ENST00000485870 KIAA1644Q3SXP7 199 aa11.72□□□□□ -0.53
COL1A1-206ENST00000485870 CARD19Q96LW7 228 aa11.72□□□□□ -0.53
COL1A1-206ENST00000485870 A0A087WYN8 130 aa11.71□□□□□ -0.53
COL1A1-206ENST00000485870 RPL37AP61513 92 aaKnown RBP11.71□□□□□ -0.53
COL1A1-206ENST00000485870 HERC1Q15751 4861 aa11.7□□□□□ -0.54
COL1A1-206ENST00000485870 IGLV4-69A0A075B6H9 119 aa11.7□□□□□ -0.54
COL1A1-206ENST00000485870 IGLV4-3A0A075B6K6 122 aa11.7□□□□□ -0.54
COL1A1-206ENST00000485870 SYCNQ0VAF6 134 aa11.7□□□□□ -0.54
COL1A1-206ENST00000485870 MAJINQ3KP22 176 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms