RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 CCL25O15444 150 aa3.77□□□□□ -1.81
SMC4-217ENST00000485867 MGPP08493 103 aa3.77□□□□□ -1.81
SMC4-217ENST00000485867 CXCL1P09341 107 aa3.77□□□□□ -1.81
SMC4-217ENST00000485867 SMIM17P0DL12 118 aa3.77□□□□□ -1.81
SMC4-217ENST00000485867 MT1HP80294 61 aa3.77□□□□□ -1.81
SMC4-217ENST00000485867 COTL1Q14019 142 aa3.77□□□□□ -1.81
SMC4-217ENST00000485867 CNPY1Q3B7I2 92 aa3.77□□□□□ -1.81
SMC4-217ENST00000485867 SPANXN1Q5VSR9 72 aa3.77□□□□□ -1.81
SMC4-217ENST00000485867 TRIQKQ629K1 86 aa3.77□□□□□ -1.81
SMC4-217ENST00000485867 EIF5AL1Q6IS14 154 aaKnown RBP3.77□□□□□ -1.81
SMC4-217ENST00000485867 LINC00173Q6ZV60 143 aa3.77□□□□□ -1.81
SMC4-217ENST00000485867 AP1S3Q96PC3 154 aa3.77□□□□□ -1.81
SMC4-217ENST00000485867 ZFP30Q9Y2G7 519 aa3.77□□□□□ -1.81
SMC4-217ENST00000485867 HSPB11Q9Y547 144 aa3.77□□□□□ -1.81
SMC4-217ENST00000485867 LINC00959A0A1B0GUT2 108 aa3.76□□□□□ -1.81
SMC4-217ENST00000485867 A0A1W2PRE2 83 aa3.76□□□□□ -1.81
SMC4-217ENST00000485867 OR5AL1P0C617 328 aa3.76□□□□□ -1.81
SMC4-217ENST00000485867 SSTP61278 116 aa3.76□□□□□ -1.81
SMC4-217ENST00000485867 LRRC37A5PQ49AS3 106 aa3.76□□□□□ -1.81
SMC4-217ENST00000485867 AMMECR1LQ6DCA0 310 aa3.76□□□□□ -1.81
SMC4-217ENST00000485867 RNASEKQ6P5S7 137 aaKnown RBP3.76□□□□□ -1.81
SMC4-217ENST00000485867 FAM19A5Q7Z5A7 132 aaPredicted RBP3.76□□□□□ -1.81
SMC4-217ENST00000485867 OR5A1Q8NGJ0 315 aa3.76□□□□□ -1.81
SMC4-217ENST00000485867 CAMK2N2Q96S95 79 aa3.76□□□□□ -1.81
SMC4-217ENST00000485867 SMIM3Q9BZL3 60 aa3.76□□□□□ -1.81
SMC4-217ENST00000485867 PPDPFQ9H3Y8 114 aa3.76□□□□□ -1.81
SMC4-217ENST00000485867 TMEM167BQ9NRX6 74 aa3.76□□□□□ -1.81
SMC4-217ENST00000485867 CENPXA8MT69 81 aa3.75□□□□□ -1.81
SMC4-217ENST00000485867 BCL2L11O43521 198 aa3.75□□□□□ -1.81
SMC4-217ENST00000485867 ZNF861PO60384 105 aa3.75□□□□□ -1.81
SMC4-217ENST00000485867 UBE2BP63146 152 aa3.75□□□□□ -1.81
SMC4-217ENST00000485867 KRTAP19-2Q3LHN2 52 aa3.75□□□□□ -1.81
SMC4-217ENST00000485867 RASL11AQ6T310 242 aa3.75□□□□□ -1.81
SMC4-217ENST00000485867 OPRPNQ99935 248 aaPredicted RBP3.75□□□□□ -1.81
SMC4-217ENST00000485867 WFDC1Q9HC57 220 aa3.75□□□□□ -1.81
SMC4-217ENST00000485867 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.74□□□□□ -1.81
SMC4-217ENST00000485867 IGKV2-29A2NJV5 120 aaPredicted RBP3.74□□□□□ -1.81
SMC4-217ENST00000485867 C19orf71A6NCJ1 209 aa3.74□□□□□ -1.81
SMC4-217ENST00000485867 M0QXV9 152 aa3.74□□□□□ -1.81
SMC4-217ENST00000485867 SIX6O95475 246 aa3.74□□□□□ -1.81
SMC4-217ENST00000485867 CXorf1O96002 111 aa3.74□□□□□ -1.81
SMC4-217ENST00000485867 LTAP01374 205 aa3.74□□□□□ -1.81
SMC4-217ENST00000485867 S100A5P33763 92 aa3.74□□□□□ -1.81
SMC4-217ENST00000485867 KRTAP13-2Q52LG2 175 aa3.74□□□□□ -1.81
SMC4-217ENST00000485867 CD164L2Q6UWJ8 174 aa3.74□□□□□ -1.81
SMC4-217ENST00000485867 LINC00304Q8N9R0 145 aa3.74□□□□□ -1.81
SMC4-217ENST00000485867 HIST1H2BAQ96A08 127 aa3.74□□□□□ -1.81
SMC4-217ENST00000485867 FMC1Q96HJ9 113 aa3.74□□□□□ -1.81
SMC4-217ENST00000485867 C2orf48Q96LS8 159 aa3.74□□□□□ -1.81
SMC4-217ENST00000485867 NIT2Q9NQR4 276 aa3.74□□□□□ -1.81
SMC4-217ENST00000485867 NUDT15Q9NV35 164 aa3.74□□□□□ -1.81
SMC4-217ENST00000485867 H7C423 109 aa3.73□□□□□ -1.81
SMC4-217ENST00000485867 TSHBP01222 138 aa3.73□□□□□ -1.81
SMC4-217ENST00000485867 ESDP10768 282 aa3.73□□□□□ -1.81
SMC4-217ENST00000485867 NTF3P20783 257 aa3.73□□□□□ -1.81
SMC4-217ENST00000485867 UBE2G2P60604 165 aa3.73□□□□□ -1.81
SMC4-217ENST00000485867 UBE2G1P62253 170 aa3.73□□□□□ -1.81
SMC4-217ENST00000485867 LITAFQ99732 161 aa3.73□□□□□ -1.81
SMC4-217ENST00000485867 SSPOA2VEC9 5147 aa3.73□□□□□ -1.81
SMC4-217ENST00000485867 FAM74A7A6NL05 159 aa3.72□□□□□ -1.81
SMC4-217ENST00000485867 PLA2G10O15496 165 aa3.72□□□□□ -1.81
SMC4-217ENST00000485867 ZNF25P17030 456 aaPredicted RBP3.72□□□□□ -1.81
SMC4-217ENST00000485867 SEC61BP60468 96 aaKnown RBP3.72□□□□□ -1.81
SMC4-217ENST00000485867 SS18Q15532 418 aa3.72□□□□□ -1.81
SMC4-217ENST00000485867 KRTAP13-3Q3SY46 172 aa3.72□□□□□ -1.81
SMC4-217ENST00000485867 COX7A2LO14548 114 aa3.71□□□□□ -1.82
SMC4-217ENST00000485867 LYRM1O43325 122 aa3.71□□□□□ -1.82
SMC4-217ENST00000485867 NOL3O60936 208 aaKnown RBP3.71□□□□□ -1.82
SMC4-217ENST00000485867 NCR2O95944 276 aa3.71□□□□□ -1.82
SMC4-217ENST00000485867 APCSP02743 223 aa3.71□□□□□ -1.82
SMC4-217ENST00000485867 IL7P13232 177 aa3.71□□□□□ -1.82
SMC4-217ENST00000485867 CTAG1AP78358 180 aa3.71□□□□□ -1.82
SMC4-217ENST00000485867 SPAG11BQ08648 103 aa3.71□□□□□ -1.82
SMC4-217ENST00000485867 LINC00337Q8N6G1 96 aa3.71□□□□□ -1.82
SMC4-217ENST00000485867 IMMP2LQ96T52 175 aa3.71□□□□□ -1.82
SMC4-217ENST00000485867 ANAPC11Q9NYG5 84 aa3.71□□□□□ -1.82
SMC4-217ENST00000485867 MRPL35Q9NZE8 188 aaKnown RBP3.71□□□□□ -1.82
SMC4-217ENST00000485867 FCGBPQ9Y6R7 5405 aaPredicted RBP3.7□□□□□ -1.82
SMC4-217ENST00000485867 G3V3Q6 166 aa3.7□□□□□ -1.82
SMC4-217ENST00000485867 TLX1NBP0CAT3 122 aa3.7□□□□□ -1.82
SMC4-217ENST00000485867 ATP6V0CP27449 155 aa3.7□□□□□ -1.82
SMC4-217ENST00000485867 OR2D3Q8NGH3 330 aa3.7□□□□□ -1.82
SMC4-217ENST00000485867 PPP1R1CQ8WVI7 109 aa3.7□□□□□ -1.82
SMC4-217ENST00000485867 TMEM101Q96IK0 257 aa3.7□□□□□ -1.82
SMC4-217ENST00000485867 BTF3L4Q96K17 158 aa3.7□□□□□ -1.82
SMC4-217ENST00000485867 PSMG3Q9BT73 122 aaPredicted RBP3.7□□□□□ -1.82
SMC4-217ENST00000485867 NKX6-2Q9C056 277 aaPredicted RBP3.7□□□□□ -1.82
SMC4-217ENST00000485867 ACTR3CQ9C0K3 210 aaPredicted RBP3.7□□□□□ -1.82
SMC4-217ENST00000485867 NUPR1O60356 82 aa3.69□□□□□ -1.82
SMC4-217ENST00000485867 MPC2O95563 127 aa3.69□□□□□ -1.82
SMC4-217ENST00000485867 MBP02144 154 aa3.69□□□□□ -1.82
SMC4-217ENST00000485867 IGLC6P0CF74 106 aa3.69□□□□□ -1.82
SMC4-217ENST00000485867 AKR1C3P42330 323 aa3.69□□□□□ -1.82
SMC4-217ENST00000485867 ZNF726P1Q15940 193 aa3.69□□□□□ -1.82
SMC4-217ENST00000485867 GAGE2EQ4V326 116 aa3.69□□□□□ -1.82
SMC4-217ENST00000485867 LINC00242Q5T6M2 205 aa3.69□□□□□ -1.82
SMC4-217ENST00000485867 FP248Q71RG6 208 aaPredicted RBP3.69□□□□□ -1.82
SMC4-217ENST00000485867 SMDT1Q9H4I9 107 aa3.69□□□□□ -1.82
SMC4-217ENST00000485867 CDC42SE2Q9NRR3 84 aa3.69□□□□□ -1.82
SMC4-217ENST00000485867 GAGE2DQ9UEU5 116 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms