RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 OPRPNQ99935 248 aaPredicted RBP3.02□□□□□ -1.93
PTPN4-210ENST00000485247 MRPS26Q9BYN8 205 aaKnown RBP3.02□□□□□ -1.93
PTPN4-210ENST00000485247 WDR61Q9GZS3 305 aaKnown RBP3.02□□□□□ -1.93
PTPN4-210ENST00000485247 ANAPC11Q9NYG5 84 aa3.02□□□□□ -1.93
PTPN4-210ENST00000485247 ARL2-SNX15V9GYD0 113 aa3.02□□□□□ -1.93
PTPN4-210ENST00000485247 MUC21A0A140T8X8 626 aa3.01□□□□□ -1.93
PTPN4-210ENST00000485247 C17orf112F2Z3M2 114 aa3.01□□□□□ -1.93
PTPN4-210ENST00000485247 CCL25O15444 150 aa3.01□□□□□ -1.93
PTPN4-210ENST00000485247 SH2D1AO60880 128 aa3.01□□□□□ -1.93
PTPN4-210ENST00000485247 NKX2-5P52952 324 aaPredicted RBP3.01□□□□□ -1.93
PTPN4-210ENST00000485247 KRTAP13-2Q52LG2 175 aa3.01□□□□□ -1.93
PTPN4-210ENST00000485247 AMMECR1LQ6DCA0 310 aa3.01□□□□□ -1.93
PTPN4-210ENST00000485247 NOTCH2NLQ7Z3S9 236 aa3.01□□□□□ -1.93
PTPN4-210ENST00000485247 OR5A1Q8NGJ0 315 aa3.01□□□□□ -1.93
PTPN4-210ENST00000485247 OR10AG1Q8NH19 301 aa3.01□□□□□ -1.93
PTPN4-210ENST00000485247 EPDR1Q9UM22 224 aa3.01□□□□□ -1.93
PTPN4-210ENST00000485247 A0A087WXM4 84 aa3□□□□□ -1.93
PTPN4-210ENST00000485247 A0A1W2PPV4 95 aa3□□□□□ -1.93
PTPN4-210ENST00000485247 A4D1N5 150 aa3□□□□□ -1.93
PTPN4-210ENST00000485247 H3BMQ9 156 aa3□□□□□ -1.93
PTPN4-210ENST00000485247 SMIM17P0DL12 118 aa3□□□□□ -1.93
PTPN4-210ENST00000485247 KIAA1644Q3SXP7 199 aa3□□□□□ -1.93
PTPN4-210ENST00000485247 KRTAP13-3Q3SY46 172 aa3□□□□□ -1.93
PTPN4-210ENST00000485247 RNASEKQ6P5S7 137 aaKnown RBP3□□□□□ -1.93
PTPN4-210ENST00000485247 ZNF471Q9BX82 626 aaPredicted RBP3□□□□□ -1.93
PTPN4-210ENST00000485247 USH2AO75445 5202 aa3□□□□□ -1.93
PTPN4-210ENST00000485247 SSPOA2VEC9 5147 aa2.99□□□□□ -1.93
PTPN4-210ENST00000485247 M0QXV9 152 aa2.99□□□□□ -1.93
PTPN4-210ENST00000485247 M0QY20 66 aa2.99□□□□□ -1.93
PTPN4-210ENST00000485247 NDUFB6O95139 128 aa2.99□□□□□ -1.93
PTPN4-210ENST00000485247 MGPP08493 103 aa2.99□□□□□ -1.93
PTPN4-210ENST00000485247 ARL14EPLP0DKL9 152 aa2.99□□□□□ -1.93
PTPN4-210ENST00000485247 COTL1Q14019 142 aa2.99□□□□□ -1.93
PTPN4-210ENST00000485247 LRRC37A5PQ49AS3 106 aa2.99□□□□□ -1.93
PTPN4-210ENST00000485247 PYDC2Q56P42 97 aa2.99□□□□□ -1.93
PTPN4-210ENST00000485247 SPANXN1Q5VSR9 72 aa2.99□□□□□ -1.93
PTPN4-210ENST00000485247 FCGBPQ9Y6R7 5405 aaPredicted RBP2.98□□□□□ -1.93
PTPN4-210ENST00000485247 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.98□□□□□ -1.93
PTPN4-210ENST00000485247 LINC00959A0A1B0GUT2 108 aa2.98□□□□□ -1.93
PTPN4-210ENST00000485247 IGKV2-29A2NJV5 120 aaPredicted RBP2.98□□□□□ -1.93
PTPN4-210ENST00000485247 C19orf71A6NCJ1 209 aa2.98□□□□□ -1.93
PTPN4-210ENST00000485247 BCL2L11O43521 198 aa2.98□□□□□ -1.93
PTPN4-210ENST00000485247 ZC2HC1BQ5TFG8 222 aa2.98□□□□□ -1.93
PTPN4-210ENST00000485247 Q86TA4 180 aa2.98□□□□□ -1.93
PTPN4-210ENST00000485247 PRAC1Q96KF2 57 aa2.98□□□□□ -1.93
PTPN4-210ENST00000485247 PGLYRP4Q96LB8 373 aa2.98□□□□□ -1.93
PTPN4-210ENST00000485247 MED28Q9H204 178 aa2.98□□□□□ -1.93
PTPN4-210ENST00000485247 C5orf52A6NGY3 159 aa2.97□□□□□ -1.93
PTPN4-210ENST00000485247 KRTAP4-16G5E9R7 235 aaPredicted RBP2.97□□□□□ -1.93
PTPN4-210ENST00000485247 ESDP10768 282 aa2.97□□□□□ -1.93
PTPN4-210ENST00000485247 GCHFRP30047 84 aa2.97□□□□□ -1.93
PTPN4-210ENST00000485247 IL15RAQ13261 267 aa2.97□□□□□ -1.93
PTPN4-210ENST00000485247 SS18Q15532 418 aa2.97□□□□□ -1.93
PTPN4-210ENST00000485247 CD164L2Q6UWJ8 174 aa2.97□□□□□ -1.93
PTPN4-210ENST00000485247 FP248Q71RG6 208 aaPredicted RBP2.97□□□□□ -1.93
PTPN4-210ENST00000485247 SCGB1C1Q8TD33 95 aa2.97□□□□□ -1.93
PTPN4-210ENST00000485247 DEDD2Q8WXF8 326 aa2.97□□□□□ -1.93
PTPN4-210ENST00000485247 AP1S3Q96PC3 154 aa2.97□□□□□ -1.93
PTPN4-210ENST00000485247 MACF1Q9UPN3 7388 aaKnown RBP2.97□□□□□ -1.93
PTPN4-210ENST00000485247 STAG3L2P0CL84 134 aa2.96□□□□□ -1.94
PTPN4-210ENST00000485247 STAG3L3P0CL85 134 aa2.96□□□□□ -1.94
PTPN4-210ENST00000485247 RASL11AQ6T310 242 aa2.96□□□□□ -1.94
PTPN4-210ENST00000485247 C2orf48Q96LS8 159 aa2.96□□□□□ -1.94
PTPN4-210ENST00000485247 IMMP2LQ96T52 175 aa2.96□□□□□ -1.94
PTPN4-210ENST00000485247 WFDC1Q9HC57 220 aa2.96□□□□□ -1.94
PTPN4-210ENST00000485247 IGKV2D-26A0A0A0MRZ7 120 aa2.95□□□□□ -1.94
PTPN4-210ENST00000485247 PEX7O00628 323 aa2.95□□□□□ -1.94
PTPN4-210ENST00000485247 COX7A2LO14548 114 aa2.95□□□□□ -1.94
PTPN4-210ENST00000485247 SNAI2O43623 268 aa2.95□□□□□ -1.94
PTPN4-210ENST00000485247 OR5AL1P0C617 328 aa2.95□□□□□ -1.94
PTPN4-210ENST00000485247 NTF3P20783 257 aa2.95□□□□□ -1.94
PTPN4-210ENST00000485247 RPL28P46779 137 aaKnown RBP2.95□□□□□ -1.94
PTPN4-210ENST00000485247 CDC34P49427 236 aaPredicted RBP2.95□□□□□ -1.94
PTPN4-210ENST00000485247 SPAG11BQ08648 103 aa2.95□□□□□ -1.94
PTPN4-210ENST00000485247 LINC00242Q5T6M2 205 aa2.95□□□□□ -1.94
PTPN4-210ENST00000485247 COX8CQ7Z4L0 72 aa2.95□□□□□ -1.94
PTPN4-210ENST00000485247 OR2D3Q8NGH3 330 aa2.95□□□□□ -1.94
PTPN4-210ENST00000485247 TMEM101Q96IK0 257 aa2.95□□□□□ -1.94
PTPN4-210ENST00000485247 BTF3L4Q96K17 158 aa2.95□□□□□ -1.94
PTPN4-210ENST00000485247 SEC22CQ9BRL7 303 aa2.95□□□□□ -1.94
PTPN4-210ENST00000485247 SMIM3Q9BZL3 60 aa2.95□□□□□ -1.94
PTPN4-210ENST00000485247 NIT2Q9NQR4 276 aa2.95□□□□□ -1.94
PTPN4-210ENST00000485247 ZFP30Q9Y2G7 519 aa2.95□□□□□ -1.94
PTPN4-210ENST00000485247 A0A1B0GVG6 124 aa2.94□□□□□ -1.94
PTPN4-210ENST00000485247 NAP1L6A6NFF2 107 aa2.94□□□□□ -1.94
PTPN4-210ENST00000485247 KRTAP16-1A8MUX0 517 aa2.94□□□□□ -1.94
PTPN4-210ENST00000485247 H7C423 109 aa2.94□□□□□ -1.94
PTPN4-210ENST00000485247 NUPR1O60356 82 aa2.94□□□□□ -1.94
PTPN4-210ENST00000485247 ZNF25P17030 456 aaPredicted RBP2.94□□□□□ -1.94
PTPN4-210ENST00000485247 UBE2G2P60604 165 aa2.94□□□□□ -1.94
PTPN4-210ENST00000485247 CTAG1AP78358 180 aa2.94□□□□□ -1.94
PTPN4-210ENST00000485247 FAM229BQ4G0N7 80 aa2.94□□□□□ -1.94
PTPN4-210ENST00000485247 C5orf38Q86SI9 138 aa2.94□□□□□ -1.94
PTPN4-210ENST00000485247 TMEM167BQ9NRX6 74 aa2.94□□□□□ -1.94
PTPN4-210ENST00000485247 MRPL35Q9NZE8 188 aaKnown RBP2.94□□□□□ -1.94
PTPN4-210ENST00000485247 UBE2D4Q9Y2X8 147 aa2.94□□□□□ -1.94
PTPN4-210ENST00000485247 PYGO1Q9Y3Y4 419 aa2.94□□□□□ -1.94
PTPN4-210ENST00000485247 V9GYH0 126 aa2.94□□□□□ -1.94
PTPN4-210ENST00000485247 IGLV8-61A0A075B6I0 122 aa2.93□□□□□ -1.94
PTPN4-210ENST00000485247 A0A1W2PRE2 83 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 153 ms