RNA–Protein interactions for RNA: ENST00000484693.1

FLOT1-211, Transcript of flotillin 1, humanhuman

TSL 2

Gene FLOT1, Length 1,001 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FLOT1-211ENST00000484693 LINC00526Q96FQ7 95 aa11.98□□□□□ -0.49
FLOT1-211ENST00000484693 MRAP2Q96G30 205 aa11.98□□□□□ -0.49
FLOT1-211ENST00000484693 MRPL52Q86TS9 123 aaKnown RBP11.97□□□□□ -0.49
FLOT1-211ENST00000484693 BORCS7Q96B45 105 aa11.97□□□□□ -0.49
FLOT1-211ENST00000484693 FAM210AQ96ND0 272 aa11.97□□□□□ -0.49
FLOT1-211ENST00000484693 SS18Q15532 418 aa11.96□□□□□ -0.49
FLOT1-211ENST00000484693 hCG_2014768A0A024R1R8 64 aa11.95□□□□□ -0.5
FLOT1-211ENST00000484693 POLR2KP53803 58 aaKnown RBP11.95□□□□□ -0.5
FLOT1-211ENST00000484693 CD164L2Q6UWJ8 174 aa11.95□□□□□ -0.5
FLOT1-211ENST00000484693 TMEM191AQ9H0A3 160 aa11.95□□□□□ -0.5
FLOT1-211ENST00000484693 CDC42SE2Q9NRR3 84 aa11.95□□□□□ -0.5
FLOT1-211ENST00000484693 TRBV27A0A0K0K1C4 114 aa11.94□□□□□ -0.5
FLOT1-211ENST00000484693 A0A1B0GUT8 65 aa11.94□□□□□ -0.5
FLOT1-211ENST00000484693 CEBPGP53567 150 aa11.94□□□□□ -0.5
FLOT1-211ENST00000484693 BLOC1S1P78537 153 aa11.94□□□□□ -0.5
FLOT1-211ENST00000484693 SYCNQ0VAF6 134 aa11.94□□□□□ -0.5
FLOT1-211ENST00000484693 SPINK6Q6UWN8 80 aa11.94□□□□□ -0.5
FLOT1-211ENST00000484693 AKAP14Q86UN6 197 aa11.94□□□□□ -0.5
FLOT1-211ENST00000484693 A0A0J9YXV3 536 aa11.93□□□□□ -0.5
FLOT1-211ENST00000484693 C7orf77A4D0Y5 90 aa11.93□□□□□ -0.5
FLOT1-211ENST00000484693 ZNF561-AS1K7EIQ3 104 aa11.93□□□□□ -0.5
FLOT1-211ENST00000484693 ALKAL2Q6UX46 152 aa11.93□□□□□ -0.5
FLOT1-211ENST00000484693 ZNF664Q8N3J9 261 aa11.93□□□□□ -0.5
FLOT1-211ENST00000484693 TSKUQ8WUA8 353 aa11.93□□□□□ -0.5
FLOT1-211ENST00000484693 LRP2P98164 4655 aa11.93□□□□□ -0.5
FLOT1-211ENST00000484693 HIGD1CA8MV81 97 aa11.92□□□□□ -0.5
FLOT1-211ENST00000484693 RAB4AP20338 218 aa11.92□□□□□ -0.5
FLOT1-211ENST00000484693 ODF1Q14990 250 aa11.92□□□□□ -0.5
FLOT1-211ENST00000484693 REG3GQ6UW15 175 aa11.92□□□□□ -0.5
FLOT1-211ENST00000484693 CAMPP49913 170 aa11.91□□□□□ -0.5
FLOT1-211ENST00000484693 Q6ZRP5 223 aa11.91□□□□□ -0.5
FLOT1-211ENST00000484693 LINC01551Q86U37 167 aa11.91□□□□□ -0.5
FLOT1-211ENST00000484693 SMIM7Q9BQ49 75 aa11.91□□□□□ -0.5
FLOT1-211ENST00000484693 A0A1B0GVG6 124 aa11.9□□□□□ -0.5
FLOT1-211ENST00000484693 PTTG1IPP53801 180 aa11.9□□□□□ -0.5
FLOT1-211ENST00000484693 AMN1Q8IY45 258 aa11.9□□□□□ -0.5
FLOT1-211ENST00000484693 IGLV4-69A0A075B6H9 119 aa11.89□□□□□ -0.51
FLOT1-211ENST00000484693 LOC107984640A0A0U1RRK4 108 aa11.89□□□□□ -0.51
FLOT1-211ENST00000484693 KRTAP10-8P60410 259 aa11.89□□□□□ -0.51
FLOT1-211ENST00000484693 SRSF9Q13242 221 aaKnown RBP eCLIP11.89□□□□□ -0.51
FLOT1-211ENST00000484693 ISOC2Q96AB3 205 aa11.89□□□□□ -0.51
FLOT1-211ENST00000484693 OSTCQ9NRP0 149 aa11.89□□□□□ -0.51
FLOT1-211ENST00000484693 SMKR1H3BMG3 65 aa11.88□□□□□ -0.51
FLOT1-211ENST00000484693 COX7A2LO14548 114 aa11.88□□□□□ -0.51
FLOT1-211ENST00000484693 FCER1GP30273 86 aa11.88□□□□□ -0.51
FLOT1-211ENST00000484693 C1orf196B1AJZ1 125 aa11.87□□□□□ -0.51
FLOT1-211ENST00000484693 VCYO14598 125 aa11.87□□□□□ -0.51
FLOT1-211ENST00000484693 MALP21145 153 aa11.87□□□□□ -0.51
FLOT1-211ENST00000484693 GAGE2BQ13066 116 aa11.87□□□□□ -0.51
FLOT1-211ENST00000484693 CSDC2Q9Y534 153 aaKnown RBP11.87□□□□□ -0.51
FLOT1-211ENST00000484693 NRACQ8N912 160 aa11.86□□□□□ -0.51
FLOT1-211ENST00000484693 EIF5A2Q9GZV4 153 aaKnown RBP11.86□□□□□ -0.51
FLOT1-211ENST00000484693 UBE2D4Q9Y2X8 147 aa11.86□□□□□ -0.51
FLOT1-211ENST00000484693 ZNF727A8MUV8 499 aa11.85□□□□□ -0.51
FLOT1-211ENST00000484693 PPP1R17O96001 155 aa11.85□□□□□ -0.51
FLOT1-211ENST00000484693 SUMO2P61956 95 aaKnown RBP11.85□□□□□ -0.51
FLOT1-211ENST00000484693 SMAGPQ0VAQ4 97 aa11.85□□□□□ -0.51
FLOT1-211ENST00000484693 RIGQ13278 110 aa11.85□□□□□ -0.51
FLOT1-211ENST00000484693 RNASE13Q5GAN3 156 aaKnown RBP11.85□□□□□ -0.51
FLOT1-211ENST00000484693 NUP35Q8NFH5 326 aa11.85□□□□□ -0.51
FLOT1-211ENST00000484693 V9GYV3 84 aa11.85□□□□□ -0.51
FLOT1-211ENST00000484693 CAMK2N2Q96S95 79 aa11.84□□□□□ -0.51
FLOT1-211ENST00000484693 TRAV13-1A0A0B4J241 112 aa11.83□□□□□ -0.52
FLOT1-211ENST00000484693 A0A1W2PNN7 141 aa11.83□□□□□ -0.52
FLOT1-211ENST00000484693 APOMO95445 188 aa11.83□□□□□ -0.52
FLOT1-211ENST00000484693 SRP19P09132 144 aaKnown RBP11.83□□□□□ -0.52
FLOT1-211ENST00000484693 Q6ZUT4 128 aa11.83□□□□□ -0.52
FLOT1-211ENST00000484693 C2orf48Q96LS8 159 aa11.83□□□□□ -0.52
FLOT1-211ENST00000484693 KIR2DL4Q99706 377 aa11.83□□□□□ -0.52
FLOT1-211ENST00000484693 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.82□□□□□ -0.52
FLOT1-211ENST00000484693 TIMM21Q9BVV7 248 aa11.82□□□□□ -0.52
FLOT1-211ENST00000484693 PPP1R2P9O14990 202 aa11.81□□□□□ -0.52
FLOT1-211ENST00000484693 C5orf38Q86SI9 138 aa11.81□□□□□ -0.52
FLOT1-211ENST00000484693 RPL18AQ02543 176 aaKnown RBP11.8□□□□□ -0.52
FLOT1-211ENST00000484693 SPAG11BQ08648 103 aa11.8□□□□□ -0.52
FLOT1-211ENST00000484693 C9orf116Q5BN46 136 aaPredicted RBP11.8□□□□□ -0.52
FLOT1-211ENST00000484693 MRPL51Q4U2R6 128 aaKnown RBP11.79□□□□□ -0.52
FLOT1-211ENST00000484693 TMEM18Q96B42 140 aa11.79□□□□□ -0.52
FLOT1-211ENST00000484693 NAT8BQ9UHF3 227 aa11.79□□□□□ -0.52
FLOT1-211ENST00000484693 PSORS1C2Q9UIG4 136 aa11.79□□□□□ -0.52
FLOT1-211ENST00000484693 MT-ND6P03923 174 aa11.78□□□□□ -0.52
FLOT1-211ENST00000484693 RNF151Q2KHN1 245 aa11.78□□□□□ -0.52
FLOT1-211ENST00000484693 FAM104BQ5XKR9 115 aa11.78□□□□□ -0.52
FLOT1-211ENST00000484693 OR10D4PQ8NGN7 298 aa11.77□□□□□ -0.53
FLOT1-211ENST00000484693 C20orf78Q9BR46 151 aa11.77□□□□□ -0.53
FLOT1-211ENST00000484693 RNF213Q63HN8 5207 aa11.77□□□□□ -0.53
FLOT1-211ENST00000484693 RPL23P62829 140 aaKnown RBP11.76□□□□□ -0.53
FLOT1-211ENST00000484693 RPL32P62910 135 aaKnown RBP11.76□□□□□ -0.53
FLOT1-211ENST00000484693 TMEM241Q24JQ0 296 aa11.76□□□□□ -0.53
FLOT1-211ENST00000484693 FAM74A3Q4VXF1 159 aa11.76□□□□□ -0.53
FLOT1-211ENST00000484693 OPRPNQ99935 248 aaPredicted RBP11.76□□□□□ -0.53
FLOT1-211ENST00000484693 LINC00862A6NCI5 91 aa11.75□□□□□ -0.53
FLOT1-211ENST00000484693 RPL39P62891 51 aaKnown RBP11.75□□□□□ -0.53
FLOT1-211ENST00000484693 PHF5AQ7RTV0 110 aaKnown RBP11.75□□□□□ -0.53
FLOT1-211ENST00000484693 TRBV24-1A0A075B6N3 115 aa11.74□□□□□ -0.53
FLOT1-211ENST00000484693 TCAPO15273 167 aa11.74□□□□□ -0.53
FLOT1-211ENST00000484693 ADIRFQ15847 76 aa11.74□□□□□ -0.53
FLOT1-211ENST00000484693 ORAOV1Q8WV07 137 aa11.74□□□□□ -0.53
FLOT1-211ENST00000484693 FAM104AQ969W3 186 aa11.74□□□□□ -0.53
FLOT1-211ENST00000484693 A0A1B0GW15 77 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms