RNA–Protein interactions for RNA: ENST00000483764.5

MRPL28-210, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,512 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-210ENST00000483764 TRBV7-3A0A075B6L6 115 aa12.18□□□□□ -0.46
MRPL28-210ENST00000483764 A0A1W2PPM0 123 aa12.18□□□□□ -0.46
MRPL28-210ENST00000483764 ZNF815PA8K554 130 aa12.18□□□□□ -0.46
MRPL28-210ENST00000483764 RPL39P62891 51 aaKnown RBP12.18□□□□□ -0.46
MRPL28-210ENST00000483764 LINC00612Q8N6U2 182 aa12.18□□□□□ -0.46
MRPL28-210ENST00000483764 TRBV10-1A0A0K0K1A3 114 aa12.17□□□□□ -0.46
MRPL28-210ENST00000483764 A0A1B0GWB2 263 aa12.17□□□□□ -0.46
MRPL28-210ENST00000483764 P0DMU3 169 aa12.17□□□□□ -0.46
MRPL28-210ENST00000483764 FAM231AP0DMU4 169 aa12.17□□□□□ -0.46
MRPL28-210ENST00000483764 FAM231CP0DMU5 169 aa12.17□□□□□ -0.46
MRPL28-210ENST00000483764 DEFB130BP0DP73 79 aa12.17□□□□□ -0.46
MRPL28-210ENST00000483764 DEFB130AP0DP74 79 aa12.17□□□□□ -0.46
MRPL28-210ENST00000483764 FXYD2P54710 66 aa12.17□□□□□ -0.46
MRPL28-210ENST00000483764 SPANXB1Q9NS25 103 aaPredicted RBP12.17□□□□□ -0.46
MRPL28-210ENST00000483764 IGHV3-73A0A0B4J1V6 119 aa12.16□□□□□ -0.46
MRPL28-210ENST00000483764 TRAV4A0A0B4J268 109 aa12.16□□□□□ -0.46
MRPL28-210ENST00000483764 H3BUT2 72 aa12.16□□□□□ -0.46
MRPL28-210ENST00000483764 SPART-AS1P0CW21 52 aa12.16□□□□□ -0.46
MRPL28-210ENST00000483764 PLEKHB2Q96CS7 222 aa12.16□□□□□ -0.46
MRPL28-210ENST00000483764 SCGB1D4Q6XE38 83 aa12.16□□□□□ -0.46
MRPL28-210ENST00000483764 ZNF479Q96JC4 524 aa12.16□□□□□ -0.46
MRPL28-210ENST00000483764 B9D2Q9BPU9 175 aa12.16□□□□□ -0.46
MRPL28-210ENST00000483764 TIMM21Q9BVV7 248 aa12.16□□□□□ -0.46
MRPL28-210ENST00000483764 TTTY13Q9BZ97 58 aa12.16□□□□□ -0.46
MRPL28-210ENST00000483764 IGLV4-3A0A075B6K6 122 aa12.15□□□□□ -0.46
MRPL28-210ENST00000483764 LEPROTO15243 131 aa12.15□□□□□ -0.46
MRPL28-210ENST00000483764 TMEM170BQ5T4T1 132 aa12.15□□□□□ -0.46
MRPL28-210ENST00000483764 AMELXQ99217 191 aa12.15□□□□□ -0.46
MRPL28-210ENST00000483764 C11orf68Q9H3H3 251 aaKnown RBP12.15□□□□□ -0.46
MRPL28-210ENST00000483764 COTL1Q14019 142 aa12.14□□□□□ -0.47
MRPL28-210ENST00000483764 PHLDA1Q8WV24 401 aaPredicted RBP12.14□□□□□ -0.47
MRPL28-210ENST00000483764 CELA1Q9UNI1 258 aa12.14□□□□□ -0.47
MRPL28-210ENST00000483764 TEX48A0A1B0GUV7 120 aa12.13□□□□□ -0.47
MRPL28-210ENST00000483764 LGALS3P17931 250 aaKnown RBP12.13□□□□□ -0.47
MRPL28-210ENST00000483764 C12orf74Q32Q52 190 aa12.13□□□□□ -0.47
MRPL28-210ENST00000483764 NHP2Q9NX24 153 aaKnown RBP12.13□□□□□ -0.47
MRPL28-210ENST00000483764 TMEM223A0PJW6 202 aa12.12□□□□□ -0.47
MRPL28-210ENST00000483764 DAD1P61803 113 aa12.12□□□□□ -0.47
MRPL28-210ENST00000483764 MRPS36P82909 103 aaKnown RBP12.12□□□□□ -0.47
MRPL28-210ENST00000483764 Q6ZSN1 163 aa12.12□□□□□ -0.47
MRPL28-210ENST00000483764 CBY1Q9Y3M2 126 aa12.12□□□□□ -0.47
MRPL28-210ENST00000483764 SPCS1Q9Y6A9 102 aa12.12□□□□□ -0.47
MRPL28-210ENST00000483764 A0A0J9YWU9 116 aa12.11□□□□□ -0.47
MRPL28-210ENST00000483764 J3QQQ9 107 aa12.11□□□□□ -0.47
MRPL28-210ENST00000483764 ZNRF2Q8NHG8 242 aa12.11□□□□□ -0.47
MRPL28-210ENST00000483764 SRSF9Q13242 221 aaKnown RBP eCLIP12.11□□□□□ -0.47
MRPL28-210ENST00000483764 LYRM7Q5U5X0 104 aa12.11□□□□□ -0.47
MRPL28-210ENST00000483764 RAB37Q96AX2 223 aa12.11□□□□□ -0.47
MRPL28-210ENST00000483764 MEGF8Q7Z7M0 2845 aa12.1□□□□□ -0.47
MRPL28-210ENST00000483764 TRGV4A0A0C4DH28 118 aa12.1□□□□□ -0.47
MRPL28-210ENST00000483764 DAZ4Q86SG3 579 aaKnown RBP12.1□□□□□ -0.47
MRPL28-210ENST00000483764 SLC25A29Q8N8R3 303 aa12.1□□□□□ -0.47
MRPL28-210ENST00000483764 DAZ3Q9NR90 486 aaKnown RBP12.1□□□□□ -0.47
MRPL28-210ENST00000483764 A0A0J9YY99 117 aa12.09□□□□□ -0.47
MRPL28-210ENST00000483764 TINCRA0A1B0GVN0 87 aa12.09□□□□□ -0.47
MRPL28-210ENST00000483764 IGLL5B9A064 214 aa12.09□□□□□ -0.47
MRPL28-210ENST00000483764 ZNF22P17026 224 aaPredicted RBP12.09□□□□□ -0.47
MRPL28-210ENST00000483764 RPL36AP83881 106 aaKnown RBP12.09□□□□□ -0.47
MRPL28-210ENST00000483764 FHL2Q14192 279 aa12.09□□□□□ -0.47
MRPL28-210ENST00000483764 RPL36ALQ969Q0 106 aaKnown RBP12.09□□□□□ -0.47
MRPL28-210ENST00000483764 CHCHD7Q9BUK0 85 aa12.09□□□□□ -0.47
MRPL28-210ENST00000483764 TENM3Q9P273 2699 aa12.09□□□□□ -0.47
MRPL28-210ENST00000483764 NACAE9PAV3 2078 aa12.08□□□□□ -0.48
MRPL28-210ENST00000483764 K7ERU9 68 aa12.08□□□□□ -0.48
MRPL28-210ENST00000483764 CSDC2Q9Y534 153 aaKnown RBP12.08□□□□□ -0.48
MRPL28-210ENST00000483764 NHLRC4P0CG21 123 aaPredicted RBP12.07□□□□□ -0.48
MRPL28-210ENST00000483764 UBE2D4Q9Y2X8 147 aa12.07□□□□□ -0.48
MRPL28-210ENST00000483764 ATP5G1P05496 136 aa12.06□□□□□ -0.48
MRPL28-210ENST00000483764 UBE2D1P51668 147 aa12.06□□□□□ -0.48
MRPL28-210ENST00000483764 TRBV6-4A0A1B0GX49 114 aa12.06□□□□□ -0.48
MRPL28-210ENST00000483764 TMEM238C9JI98 176 aa12.06□□□□□ -0.48
MRPL28-210ENST00000483764 K7EQD1 137 aa12.06□□□□□ -0.48
MRPL28-210ENST00000483764 TIRAPP58753 221 aa12.06□□□□□ -0.48
MRPL28-210ENST00000483764 C11orf45Q8TAV5 145 aa12.06□□□□□ -0.48
MRPL28-210ENST00000483764 Q9UF83 564 aa12.06□□□□□ -0.48
MRPL28-210ENST00000483764 HUWE1Q7Z6Z7 4374 aaKnown RBP12.05□□□□□ -0.48
MRPL28-210ENST00000483764 H7C423 109 aa12.05□□□□□ -0.48
MRPL28-210ENST00000483764 A0A0J9YXV3 536 aa12.04□□□□□ -0.48
MRPL28-210ENST00000483764 OCIAD2Q56VL3 154 aa12.04□□□□□ -0.48
MRPL28-210ENST00000483764 FAM19A3Q7Z5A8 133 aa12.04□□□□□ -0.48
MRPL28-210ENST00000483764 GTSF1LQ9H1H1 148 aa12.04□□□□□ -0.48
MRPL28-210ENST00000483764 DNAH9Q9NYC9 4486 aa12.04□□□□□ -0.48
MRPL28-210ENST00000483764 F8W1H4 67 aa12.03□□□□□ -0.48
MRPL28-210ENST00000483764 HTN3P15516 51 aa12.03□□□□□ -0.48
MRPL28-210ENST00000483764 DGAT2L7PQ6IED9 249 aa12.03□□□□□ -0.48
MRPL28-210ENST00000483764 PRO0255Q9UI72 69 aa12.03□□□□□ -0.48
MRPL28-210ENST00000483764 IGHV1-58A0A0C4DH39 117 aa12.02□□□□□ -0.48
MRPL28-210ENST00000483764 F5H768 121 aa12.02□□□□□ -0.48
MRPL28-210ENST00000483764 K7ERJ3 54 aa12.02□□□□□ -0.48
MRPL28-210ENST00000483764 NANOS2P60321 138 aaKnown RBP12.02□□□□□ -0.48
MRPL28-210ENST00000483764 RPL24P83731 157 aaKnown RBP12.02□□□□□ -0.48
MRPL28-210ENST00000483764 OPRPNQ99935 248 aaPredicted RBP12.02□□□□□ -0.48
MRPL28-210ENST00000483764 IGLV5-45A0A087WSX0 123 aa12.01□□□□□ -0.49
MRPL28-210ENST00000483764 IGHV3-30P01768 117 aa12.01□□□□□ -0.49
MRPL28-210ENST00000483764 IGHV3-30-5P0DP03 117 aa12.01□□□□□ -0.49
MRPL28-210ENST00000483764 Q6ZTC4 211 aa12.01□□□□□ -0.49
MRPL28-210ENST00000483764 GEMIN7Q9H840 131 aaKnown RBP12.01□□□□□ -0.49
MRPL28-210ENST00000483764 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.01□□□□□ -0.49
MRPL28-210ENST00000483764 TSPEAR-AS2P59090 65 aa12.01□□□□□ -0.49
MRPL28-210ENST00000483764 PAX4O43316 350 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms