RNA–Protein interactions for RNA: ENST00000483474.1

RTCA-204, Transcript of RNA 3'-terminal phosphate cyclase, human

TSL 3

Gene RTCA, Length 683 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTCA-204	ENST00000483474	SS18	Q15532	418 aa		11.3	□□□□□ -0.6
RTCA-204	ENST00000483474	MRPL51	Q4U2R6	128 aa	Known RBP	11.3	□□□□□ -0.6
RTCA-204	ENST00000483474	SCX	Q7RTU7	201 aa		11.3	□□□□□ -0.6
RTCA-204	ENST00000483474	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	11.3	□□□□□ -0.6
RTCA-204	ENST00000483474	MRPL54	Q6P161	138 aa	Known RBP	11.29	□□□□□ -0.6
RTCA-204	ENST00000483474	LINC00528	Q8N1L1	170 aa		11.29	□□□□□ -0.6
RTCA-204	ENST00000483474	C20orf78	Q9BR46	151 aa		11.29	□□□□□ -0.6
RTCA-204	ENST00000483474	MT-ND4L	P03901	98 aa		11.28	□□□□□ -0.6
RTCA-204	ENST00000483474	CNBP	P62633	177 aa	Known RBP	11.28	□□□□□ -0.6
RTCA-204	ENST00000483474	MRPL52	Q86TS9	123 aa	Known RBP	11.28	□□□□□ -0.6
RTCA-204	ENST00000483474	PPBP	P02775	128 aa		11.27	□□□□□ -0.61
RTCA-204	ENST00000483474	ATP5L2	Q7Z4Y8	100 aa		11.27	□□□□□ -0.61
RTCA-204	ENST00000483474	NRAC	Q8N912	160 aa		11.27	□□□□□ -0.61
RTCA-204	ENST00000483474	CIRBP-AS1	Q8TBR5	109 aa		11.27	□□□□□ -0.61
RTCA-204	ENST00000483474	DPH3	Q96FX2	82 aa		11.27	□□□□□ -0.61
RTCA-204	ENST00000483474	IGHV3-64	A0A075B6Q5	118 aa		11.26	□□□□□ -0.61
RTCA-204	ENST00000483474	ZNF664	Q8N3J9	261 aa		11.26	□□□□□ -0.61
RTCA-204	ENST00000483474	ANAPC16	Q96DE5	110 aa		11.26	□□□□□ -0.61
RTCA-204	ENST00000483474	SRRM2	Q9UQ35	2752 aa	Known RBP	11.26	□□□□□ -0.61
RTCA-204	ENST00000483474	ABCA13	Q86UQ4	5058 aa		11.25	□□□□□ -0.61
RTCA-204	ENST00000483474	TRBV24-1	A0A075B6N3	115 aa		11.25	□□□□□ -0.61
RTCA-204	ENST00000483474	LINC00959	A0A1B0GUT2	108 aa		11.25	□□□□□ -0.61
RTCA-204	ENST00000483474	XCL1	P47992	114 aa		11.25	□□□□□ -0.61
RTCA-204	ENST00000483474	CDC42SE2	Q9NRR3	84 aa		11.25	□□□□□ -0.61
RTCA-204	ENST00000483474		D6R8Y8	96 aa		11.24	□□□□□ -0.61
RTCA-204	ENST00000483474	CCL25	O15444	150 aa		11.24	□□□□□ -0.61
RTCA-204	ENST00000483474	TNFRSF6B	O95407	300 aa		11.24	□□□□□ -0.61
RTCA-204	ENST00000483474	RPL32	P62910	135 aa	Known RBP	11.24	□□□□□ -0.61
RTCA-204	ENST00000483474	CSDC2	Q9Y534	153 aa	Known RBP	11.24	□□□□□ -0.61
RTCA-204	ENST00000483474	PHOX2A	O14813	284 aa		11.23	□□□□□ -0.61
RTCA-204	ENST00000483474	CLLU1	Q5K131	121 aa		11.23	□□□□□ -0.61
RTCA-204	ENST00000483474		A0A1B0GXF2	115 aa		11.22	□□□□□ -0.61
RTCA-204	ENST00000483474	C1orf196	B1AJZ1	125 aa		11.22	□□□□□ -0.61
RTCA-204	ENST00000483474	HIGD2B	Q4VC39	106 aa		11.22	□□□□□ -0.61
RTCA-204	ENST00000483474	SDIM1	Q6ZPB5	146 aa		11.22	□□□□□ -0.61
RTCA-204	ENST00000483474	ORMDL3	Q8N138	153 aa		11.22	□□□□□ -0.61
RTCA-204	ENST00000483474	C15orf56	Q8N910	161 aa		11.22	□□□□□ -0.61
RTCA-204	ENST00000483474	RAB5A	P20339	215 aa		11.21	□□□□□ -0.61
RTCA-204	ENST00000483474	FOXI1	Q12951	378 aa		11.21	□□□□□ -0.61
RTCA-204	ENST00000483474	CD164L2	Q6UWJ8	174 aa		11.21	□□□□□ -0.61
RTCA-204	ENST00000483474	SMIM2	Q9BVW6	85 aa		11.21	□□□□□ -0.61
RTCA-204	ENST00000483474	PKIG	Q9Y2B9	76 aa		11.21	□□□□□ -0.61
RTCA-204	ENST00000483474	FLG2	Q5D862	2391 aa	Predicted RBP	11.2	□□□□□ -0.62
RTCA-204	ENST00000483474	IGHV1-58	A0A0C4DH39	117 aa		11.2	□□□□□ -0.62
RTCA-204	ENST00000483474	TMEM136	Q6ZRR5	245 aa		11.2	□□□□□ -0.62
RTCA-204	ENST00000483474	TIMM21	Q9BVV7	248 aa		11.2	□□□□□ -0.62
RTCA-204	ENST00000483474	UBE2D4	Q9Y2X8	147 aa		11.2	□□□□□ -0.62
RTCA-204	ENST00000483474	GVQW2	A0A096LPI5	108 aa	Predicted RBP	11.19	□□□□□ -0.62
RTCA-204	ENST00000483474	ZNF561-AS1	K7EIQ3	104 aa		11.19	□□□□□ -0.62
RTCA-204	ENST00000483474	MAL	P21145	153 aa		11.19	□□□□□ -0.62
RTCA-204	ENST00000483474	UQCC3	Q6UW78	93 aa		11.19	□□□□□ -0.62
RTCA-204	ENST00000483474	PRELID3A	Q96N28	172 aa		11.19	□□□□□ -0.62
RTCA-204	ENST00000483474	NPY	P01303	97 aa		11.18	□□□□□ -0.62
RTCA-204	ENST00000483474	TRAV13-1	A0A0B4J241	112 aa		11.17	□□□□□ -0.62
RTCA-204	ENST00000483474	SLPI	P03973	132 aa		11.17	□□□□□ -0.62
RTCA-204	ENST00000483474	LAMTOR2	Q9Y2Q5	125 aa		11.17	□□□□□ -0.62
RTCA-204	ENST00000483474	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	11.17	□□□□□ -0.62
RTCA-204	ENST00000483474	DMBT1	Q9UGM3	2413 aa	Predicted RBP	11.16	□□□□□ -0.62
RTCA-204	ENST00000483474	COX7A2L	O14548	114 aa		11.16	□□□□□ -0.62
RTCA-204	ENST00000483474	RPL37A	P61513	92 aa	Known RBP	11.16	□□□□□ -0.62
RTCA-204	ENST00000483474	SPANXA1	Q9NS26	97 aa		11.16	□□□□□ -0.62
RTCA-204	ENST00000483474	APOM	O95445	188 aa		11.15	□□□□□ -0.62
RTCA-204	ENST00000483474	RNASE13	Q5GAN3	156 aa	Known RBP	11.15	□□□□□ -0.62
RTCA-204	ENST00000483474	MAP1LC3A	Q9H492	121 aa		11.15	□□□□□ -0.62
RTCA-204	ENST00000483474		J3QL48	77 aa		11.14	□□□□□ -0.63
RTCA-204	ENST00000483474	RPL39	P62891	51 aa	Known RBP	11.14	□□□□□ -0.63
RTCA-204	ENST00000483474	COX6A2	Q02221	97 aa		11.14	□□□□□ -0.63
RTCA-204	ENST00000483474	IMMP2L	Q96T52	175 aa		11.14	□□□□□ -0.63
RTCA-204	ENST00000483474	FAT1	Q14517	4588 aa		11.14	□□□□□ -0.63
RTCA-204	ENST00000483474	IFI27	P40305	119 aa	Predicted RBP	11.13	□□□□□ -0.63
RTCA-204	ENST00000483474	CIRBP	Q14011	172 aa	Known RBP	11.13	□□□□□ -0.63
RTCA-204	ENST00000483474		Q6ZUT4	128 aa		11.13	□□□□□ -0.63
RTCA-204	ENST00000483474	CTDSP1	Q9GZU7	261 aa		11.13	□□□□□ -0.63
RTCA-204	ENST00000483474	LINC00474	Q9P2X8	69 aa		11.13	□□□□□ -0.63
RTCA-204	ENST00000483474	LOC389332	A0A1B0GUA5	103 aa		11.12	□□□□□ -0.63
RTCA-204	ENST00000483474	TMEM218	A2RU14	115 aa		11.12	□□□□□ -0.63
RTCA-204	ENST00000483474	MRPS36	P82909	103 aa	Known RBP	11.12	□□□□□ -0.63
RTCA-204	ENST00000483474	CARD19	Q96LW7	228 aa		11.12	□□□□□ -0.63
RTCA-204	ENST00000483474		A0A087WYN8	130 aa		11.11	□□□□□ -0.63
RTCA-204	ENST00000483474	PANO1	I0J062	215 aa		11.11	□□□□□ -0.63
RTCA-204	ENST00000483474	SYCN	Q0VAF6	134 aa		11.11	□□□□□ -0.63
RTCA-204	ENST00000483474	MAJIN	Q3KP22	176 aa		11.11	□□□□□ -0.63
RTCA-204	ENST00000483474	SPACA4	Q8TDM5	124 aa		11.11	□□□□□ -0.63
RTCA-204	ENST00000483474	IGKV2-24	A0A0C4DH68	120 aa		11.1	□□□□□ -0.63
RTCA-204	ENST00000483474	IFITM10	A6NMD0	228 aa		11.1	□□□□□ -0.63
RTCA-204	ENST00000483474	PRSS47	A8MTI9	375 aa		11.1	□□□□□ -0.63
RTCA-204	ENST00000483474	CHTF8	P0CG12	524 aa		11.1	□□□□□ -0.63
RTCA-204	ENST00000483474	S100P	P25815	95 aa		11.1	□□□□□ -0.63
RTCA-204	ENST00000483474	PRSS3P2	Q8NHM4	247 aa		11.1	□□□□□ -0.63
RTCA-204	ENST00000483474	C7orf33	Q8WU49	177 aa		11.1	□□□□□ -0.63
RTCA-204	ENST00000483474	SEC11C	Q9BY50	192 aa		11.1	□□□□□ -0.63
RTCA-204	ENST00000483474	TRAV9-1	A0A075B6T8	112 aa		11.09	□□□□□ -0.63
RTCA-204	ENST00000483474	G0S2	P27469	103 aa		11.09	□□□□□ -0.63
RTCA-204	ENST00000483474	IFITM2	Q01629	132 aa		11.09	□□□□□ -0.63
RTCA-204	ENST00000483474	C5orf38	Q86SI9	138 aa		11.09	□□□□□ -0.63
RTCA-204	ENST00000483474		Q8N8P6	123 aa		11.09	□□□□□ -0.63
RTCA-204	ENST00000483474	LINC00526	Q96FQ7	95 aa		11.09	□□□□□ -0.63
RTCA-204	ENST00000483474		K7EMI3	77 aa		11.08	□□□□□ -0.64
RTCA-204	ENST00000483474	ORMDL2	Q53FV1	153 aa		11.08	□□□□□ -0.64
RTCA-204	ENST00000483474	CAMK2N2	Q96S95	79 aa		11.08	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms