RNA–Protein interactions for RNA: ENST00000483002.1

RAB11FIP3-209, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 4

Gene RAB11FIP3, Length 585 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-209ENST00000483002 HIGD1CA8MV81 97 aa10.4□□□□□ -0.74
RAB11FIP3-209ENST00000483002 SS18Q15532 418 aa10.4□□□□□ -0.74
RAB11FIP3-209ENST00000483002 EIF5A2Q9GZV4 153 aaKnown RBP10.4□□□□□ -0.74
RAB11FIP3-209ENST00000483002 TMEM191AQ9H0A3 160 aa10.4□□□□□ -0.74
RAB11FIP3-209ENST00000483002 UBR4Q5T4S7 5183 aa10.39□□□□□ -0.75
RAB11FIP3-209ENST00000483002 RAB4AP20338 218 aa10.39□□□□□ -0.75
RAB11FIP3-209ENST00000483002 POLR2KP53803 58 aaKnown RBP10.39□□□□□ -0.75
RAB11FIP3-209ENST00000483002 TSKUQ8WUA8 353 aa10.39□□□□□ -0.75
RAB11FIP3-209ENST00000483002 SMIM7Q9BQ49 75 aa10.39□□□□□ -0.75
RAB11FIP3-209ENST00000483002 CDC42SE2Q9NRR3 84 aa10.39□□□□□ -0.75
RAB11FIP3-209ENST00000483002 PRR3P79522 188 aaKnown RBP10.38□□□□□ -0.75
RAB11FIP3-209ENST00000483002 LINC01551Q86U37 167 aa10.38□□□□□ -0.75
RAB11FIP3-209ENST00000483002 AKAP14Q86UN6 197 aa10.38□□□□□ -0.75
RAB11FIP3-209ENST00000483002 AMN1Q8IY45 258 aa10.38□□□□□ -0.75
RAB11FIP3-209ENST00000483002 CARD19Q96LW7 228 aa10.38□□□□□ -0.75
RAB11FIP3-209ENST00000483002 TRBV27A0A0K0K1C4 114 aa10.37□□□□□ -0.75
RAB11FIP3-209ENST00000483002 ZNF561-AS1K7EIQ3 104 aa10.37□□□□□ -0.75
RAB11FIP3-209ENST00000483002 CD164L2Q6UWJ8 174 aa10.37□□□□□ -0.75
RAB11FIP3-209ENST00000483002 MRPL52Q86TS9 123 aaKnown RBP10.37□□□□□ -0.75
RAB11FIP3-209ENST00000483002 ZNF664Q8N3J9 261 aa10.37□□□□□ -0.75
RAB11FIP3-209ENST00000483002 FAM210AQ96ND0 272 aa10.37□□□□□ -0.75
RAB11FIP3-209ENST00000483002 LINC00474Q9P2X8 69 aa10.37□□□□□ -0.75
RAB11FIP3-209ENST00000483002 C7orf77A4D0Y5 90 aa10.36□□□□□ -0.75
RAB11FIP3-209ENST00000483002 ZNF727A8MUV8 499 aa10.36□□□□□ -0.75
RAB11FIP3-209ENST00000483002 SMKR1H3BMG3 65 aa10.36□□□□□ -0.75
RAB11FIP3-209ENST00000483002 SYCNQ0VAF6 134 aa10.36□□□□□ -0.75
RAB11FIP3-209ENST00000483002 OSTCQ9NRP0 149 aa10.36□□□□□ -0.75
RAB11FIP3-209ENST00000483002 PKIGQ9Y2B9 76 aa10.36□□□□□ -0.75
RAB11FIP3-209ENST00000483002 hCG_2014768A0A024R1R8 64 aa10.35□□□□□ -0.75
RAB11FIP3-209ENST00000483002 VCYO14598 125 aa10.35□□□□□ -0.75
RAB11FIP3-209ENST00000483002 FCER1GP30273 86 aa10.35□□□□□ -0.75
RAB11FIP3-209ENST00000483002 LINC01600Q96MT4 127 aa10.34□□□□□ -0.75
RAB11FIP3-209ENST00000483002 SRP19P09132 144 aaKnown RBP10.33□□□□□ -0.76
RAB11FIP3-209ENST00000483002 MALP21145 153 aa10.33□□□□□ -0.76
RAB11FIP3-209ENST00000483002 RIGQ13278 110 aa10.33□□□□□ -0.76
RAB11FIP3-209ENST00000483002 NUP35Q8NFH5 326 aa10.33□□□□□ -0.76
RAB11FIP3-209ENST00000483002 IGLV4-69A0A075B6H9 119 aa10.32□□□□□ -0.76
RAB11FIP3-209ENST00000483002 C1orf196B1AJZ1 125 aa10.32□□□□□ -0.76
RAB11FIP3-209ENST00000483002 CAMPP49913 170 aa10.32□□□□□ -0.76
RAB11FIP3-209ENST00000483002 GAGE2BQ13066 116 aa10.32□□□□□ -0.76
RAB11FIP3-209ENST00000483002 RNASE13Q5GAN3 156 aaKnown RBP10.32□□□□□ -0.76
RAB11FIP3-209ENST00000483002 V9GYV3 84 aa10.32□□□□□ -0.76
RAB11FIP3-209ENST00000483002 COX7A2LO14548 114 aa10.31□□□□□ -0.76
RAB11FIP3-209ENST00000483002 SUMO2P61956 95 aaKnown RBP10.31□□□□□ -0.76
RAB11FIP3-209ENST00000483002 ODF1Q14990 250 aa10.31□□□□□ -0.76
RAB11FIP3-209ENST00000483002 ISOC2Q96AB3 205 aa10.31□□□□□ -0.76
RAB11FIP3-209ENST00000483002 TRAV13-1A0A0B4J241 112 aa10.3□□□□□ -0.76
RAB11FIP3-209ENST00000483002 PPP1R17O96001 155 aa10.3□□□□□ -0.76
RAB11FIP3-209ENST00000483002 PTTG1IPP53801 180 aa10.3□□□□□ -0.76
RAB11FIP3-209ENST00000483002 SPINK6Q6UWN8 80 aa10.3□□□□□ -0.76
RAB11FIP3-209ENST00000483002 Q6ZRP5 223 aa10.3□□□□□ -0.76
RAB11FIP3-209ENST00000483002 NRACQ8N912 160 aa10.3□□□□□ -0.76
RAB11FIP3-209ENST00000483002 KIR2DL4Q99706 377 aa10.3□□□□□ -0.76
RAB11FIP3-209ENST00000483002 UBE2D4Q9Y2X8 147 aa10.3□□□□□ -0.76
RAB11FIP3-209ENST00000483002 CSDC2Q9Y534 153 aaKnown RBP10.3□□□□□ -0.76
RAB11FIP3-209ENST00000483002 LOC107984640A0A0U1RRK4 108 aa10.29□□□□□ -0.76
RAB11FIP3-209ENST00000483002 SMAGPQ0VAQ4 97 aa10.29□□□□□ -0.76
RAB11FIP3-209ENST00000483002 TMEM241Q24JQ0 296 aa10.29□□□□□ -0.76
RAB11FIP3-209ENST00000483002 C5orf38Q86SI9 138 aa10.29□□□□□ -0.76
RAB11FIP3-209ENST00000483002 CAMK2N2Q96S95 79 aa10.29□□□□□ -0.76
RAB11FIP3-209ENST00000483002 NAT8BQ9UHF3 227 aa10.29□□□□□ -0.76
RAB11FIP3-209ENST00000483002 A0A0J9YXV3 536 aa10.28□□□□□ -0.76
RAB11FIP3-209ENST00000483002 SRSF9Q13242 221 aaKnown RBP eCLIP10.28□□□□□ -0.762e-10■□□□□ 8.3
RAB11FIP3-209ENST00000483002 REG3GQ6UW15 175 aa10.28□□□□□ -0.76
RAB11FIP3-209ENST00000483002 TNXBP22105 4242 aa10.27□□□□□ -0.76
RAB11FIP3-209ENST00000483002 RPL23P62829 140 aaKnown RBP10.27□□□□□ -0.77
RAB11FIP3-209ENST00000483002 MRPL51Q4U2R6 128 aaKnown RBP10.27□□□□□ -0.77
RAB11FIP3-209ENST00000483002 FAM104BQ5XKR9 115 aa10.27□□□□□ -0.77
RAB11FIP3-209ENST00000483002 A0A1W2PNN7 141 aa10.26□□□□□ -0.77
RAB11FIP3-209ENST00000483002 PPP1R2P9O14990 202 aa10.26□□□□□ -0.77
RAB11FIP3-209ENST00000483002 KRTAP10-8P60410 259 aa10.26□□□□□ -0.77
RAB11FIP3-209ENST00000483002 ADIRFQ15847 76 aa10.26□□□□□ -0.77
RAB11FIP3-209ENST00000483002 Q6ZUT4 128 aa10.26□□□□□ -0.77
RAB11FIP3-209ENST00000483002 TMEM18Q96B42 140 aa10.26□□□□□ -0.77
RAB11FIP3-209ENST00000483002 APOMO95445 188 aa10.25□□□□□ -0.77
RAB11FIP3-209ENST00000483002 FAM74A3Q4VXF1 159 aa10.25□□□□□ -0.77
RAB11FIP3-209ENST00000483002 LINC00862A6NCI5 91 aa10.24□□□□□ -0.77
RAB11FIP3-209ENST00000483002 CKS2P33552 79 aa10.24□□□□□ -0.77
RAB11FIP3-209ENST00000483002 C2orf48Q96LS8 159 aa10.24□□□□□ -0.77
RAB11FIP3-209ENST00000483002 OPRPNQ99935 248 aaPredicted RBP10.24□□□□□ -0.77
RAB11FIP3-209ENST00000483002 C20orf78Q9BR46 151 aa10.24□□□□□ -0.77
RAB11FIP3-209ENST00000483002 TIMM21Q9BVV7 248 aa10.24□□□□□ -0.77
RAB11FIP3-209ENST00000483002 SMIM27A0A1W2PRY6 76 aa10.23□□□□□ -0.77
RAB11FIP3-209ENST00000483002 C9JQL5 133 aa10.23□□□□□ -0.77
RAB11FIP3-209ENST00000483002 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.23□□□□□ -0.77
RAB11FIP3-209ENST00000483002 RPL39P62891 51 aaKnown RBP10.23□□□□□ -0.77
RAB11FIP3-209ENST00000483002 RPL18AQ02543 176 aaKnown RBP10.23□□□□□ -0.77
RAB11FIP3-209ENST00000483002 C9orf116Q5BN46 136 aaPredicted RBP10.23□□□□□ -0.77
RAB11FIP3-209ENST00000483002 NAT8Q9UHE5 227 aa10.23□□□□□ -0.77
RAB11FIP3-209ENST00000483002 TRBV24-1A0A075B6N3 115 aa10.22□□□□□ -0.77
RAB11FIP3-209ENST00000483002 SPAG11BQ08648 103 aa10.22□□□□□ -0.77
RAB11FIP3-209ENST00000483002 TNFRSF6BO95407 300 aa10.21□□□□□ -0.77
RAB11FIP3-209ENST00000483002 A0A1B0GW15 77 aa10.2□□□□□ -0.78
RAB11FIP3-209ENST00000483002 TCAPO15273 167 aa10.2□□□□□ -0.78
RAB11FIP3-209ENST00000483002 MT-ND6P03923 174 aa10.2□□□□□ -0.78
RAB11FIP3-209ENST00000483002 RPL32P62910 135 aaKnown RBP10.2□□□□□ -0.78
RAB11FIP3-209ENST00000483002 PSORS1C2Q9UIG4 136 aa10.2□□□□□ -0.78
RAB11FIP3-209ENST00000483002 LRP2P98164 4655 aa10.19□□□□□ -0.78
RAB11FIP3-209ENST00000483002 D6R8Y8 96 aa10.19□□□□□ -0.78
RAB11FIP3-209ENST00000483002 SRSF3P84103 164 aaKnown RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 174.7 ms