RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 A8MTW9 85 aa4.33□□□□□ -1.72
CLK1-212ENST00000482590 H3BRN7 92 aa4.33□□□□□ -1.72
CLK1-212ENST00000482590 SYNGR2O43760 224 aa4.33□□□□□ -1.72
CLK1-212ENST00000482590 SLC25A6P12236 298 aa4.33□□□□□ -1.72
CLK1-212ENST00000482590 S100A2P29034 98 aa4.33□□□□□ -1.72
CLK1-212ENST00000482590 OCIAD2Q56VL3 154 aa4.33□□□□□ -1.72
CLK1-212ENST00000482590 RNASE13Q5GAN3 156 aaKnown RBP4.33□□□□□ -1.72
CLK1-212ENST00000482590 SPANXN5Q5MJ07 72 aa4.33□□□□□ -1.72
CLK1-212ENST00000482590 DNLZQ5SXM8 178 aa4.33□□□□□ -1.72
CLK1-212ENST00000482590 LYRM7Q5U5X0 104 aa4.33□□□□□ -1.72
CLK1-212ENST00000482590 AMTNQ6UX39 209 aa4.33□□□□□ -1.72
CLK1-212ENST00000482590 PRR15Q8IV56 129 aa4.33□□□□□ -1.72
CLK1-212ENST00000482590 TMEM256Q8N2U0 113 aa4.33□□□□□ -1.72
CLK1-212ENST00000482590 TOMM5Q8N4H5 51 aa4.33□□□□□ -1.72
CLK1-212ENST00000482590 RNF182Q8N6D2 247 aa4.33□□□□□ -1.72
CLK1-212ENST00000482590 C16orf74Q96GX8 76 aa4.33□□□□□ -1.72
CLK1-212ENST00000482590 RPP21Q9H633 154 aaKnown RBP4.33□□□□□ -1.72
CLK1-212ENST00000482590 IGKV3D-20A0A0C4DH25 116 aa4.32□□□□□ -1.72
CLK1-212ENST00000482590 A8MWL6 223 aa4.32□□□□□ -1.72
CLK1-212ENST00000482590 PITX3O75364 302 aa4.32□□□□□ -1.72
CLK1-212ENST00000482590 IL5P05113 134 aa4.32□□□□□ -1.72
CLK1-212ENST00000482590 LINC00869P0C866 280 aa4.32□□□□□ -1.72
CLK1-212ENST00000482590 INAFM2P0DMQ5 153 aa4.32□□□□□ -1.72
CLK1-212ENST00000482590 HTN1P15515 57 aa4.32□□□□□ -1.72
CLK1-212ENST00000482590 UBE2AP49459 152 aa4.32□□□□□ -1.72
CLK1-212ENST00000482590 Q1RN00 199 aa4.32□□□□□ -1.72
CLK1-212ENST00000482590 Q5XG85 94 aa4.32□□□□□ -1.72
CLK1-212ENST00000482590 OPRPNQ99935 248 aaPredicted RBP4.32□□□□□ -1.72
CLK1-212ENST00000482590 SLC25A21Q9BQT8 299 aaPredicted RBP4.32□□□□□ -1.72
CLK1-212ENST00000482590 PRADC1Q9BSG0 188 aa4.32□□□□□ -1.72
CLK1-212ENST00000482590 C9JCJ5 164 aa4.31□□□□□ -1.72
CLK1-212ENST00000482590 F6UZH7 168 aa4.31□□□□□ -1.72
CLK1-212ENST00000482590 BPY2O14599 106 aa4.31□□□□□ -1.72
CLK1-212ENST00000482590 PLA2G10O15496 165 aa4.31□□□□□ -1.72
CLK1-212ENST00000482590 HYPMO75409 117 aa4.31□□□□□ -1.72
CLK1-212ENST00000482590 DPM2O94777 84 aa4.31□□□□□ -1.72
CLK1-212ENST00000482590 SFT2D2O95562 160 aa4.31□□□□□ -1.72
CLK1-212ENST00000482590 PRM2P04554 102 aa4.31□□□□□ -1.72
CLK1-212ENST00000482590 SRP19P09132 144 aaKnown RBP4.31□□□□□ -1.72
CLK1-212ENST00000482590 TMBIM6P55061 237 aa4.31□□□□□ -1.72
CLK1-212ENST00000482590 PYDC2Q56P42 97 aa4.31□□□□□ -1.72
CLK1-212ENST00000482590 SLC25A34Q6PIV7 304 aa4.31□□□□□ -1.72
CLK1-212ENST00000482590 LCN15Q6UWW0 184 aa4.31□□□□□ -1.72
CLK1-212ENST00000482590 CYP2G1PQ6ZSU1 146 aa4.31□□□□□ -1.72
CLK1-212ENST00000482590 SCXQ7RTU7 201 aa4.31□□□□□ -1.72
CLK1-212ENST00000482590 TMEM263Q8WUH6 116 aaKnown RBP4.31□□□□□ -1.72
CLK1-212ENST00000482590 SLC50A1Q9BRV3 221 aa4.31□□□□□ -1.72
CLK1-212ENST00000482590 SHANK2-AS3Q9BTD1 123 aa4.31□□□□□ -1.72
CLK1-212ENST00000482590 ZNF471Q9BX82 626 aaPredicted RBP4.31□□□□□ -1.72
CLK1-212ENST00000482590 MRPL16Q9NX20 251 aaKnown RBP4.31□□□□□ -1.72
CLK1-212ENST00000482590 OR5AC2Q9NZP5 309 aa4.31□□□□□ -1.72
CLK1-212ENST00000482590 TIMM8BQ9Y5J9 83 aaPredicted RBP4.31□□□□□ -1.72
CLK1-212ENST00000482590 A0A1B0GVX0 72 aa4.3□□□□□ -1.72
CLK1-212ENST00000482590 A0A1B0GW54 56 aa4.3□□□□□ -1.72
CLK1-212ENST00000482590 J3QQQ9 107 aa4.3□□□□□ -1.72
CLK1-212ENST00000482590 SSSCA1O60232 199 aa4.3□□□□□ -1.72
CLK1-212ENST00000482590 LCA10Q71F78 164 aa4.3□□□□□ -1.72
CLK1-212ENST00000482590 C14orf178Q8N769 122 aaPredicted RBP4.3□□□□□ -1.72
CLK1-212ENST00000482590 DEDD2Q8WXF8 326 aa4.3□□□□□ -1.72
CLK1-212ENST00000482590 RMI2Q96E14 147 aa4.3□□□□□ -1.72
CLK1-212ENST00000482590 CHCHD7Q9BUK0 85 aa4.3□□□□□ -1.72
CLK1-212ENST00000482590 NKX6-2Q9C056 277 aaPredicted RBP4.3□□□□□ -1.72
CLK1-212ENST00000482590 NOP10Q9NPE3 64 aaKnown RBP4.3□□□□□ -1.72
CLK1-212ENST00000482590 PSENENQ9NZ42 101 aa4.3□□□□□ -1.72
CLK1-212ENST00000482590 TP73-AS1Q9UF72 201 aa4.3□□□□□ -1.72
CLK1-212ENST00000482590 LINC00588Q9Y4M8 146 aa4.3□□□□□ -1.72
CLK1-212ENST00000482590 OBSCNQ5VST9 7968 aa4.3□□□□□ -1.72
CLK1-212ENST00000482590 UBE2L6O14933 153 aa4.29□□□□□ -1.72
CLK1-212ENST00000482590 BCL2L11O43521 198 aa4.29□□□□□ -1.72
CLK1-212ENST00000482590 ZNF73O43830 326 aaPredicted RBP4.29□□□□□ -1.72
CLK1-212ENST00000482590 TRGC2P03986 189 aa4.29□□□□□ -1.72
CLK1-212ENST00000482590 AZU1P20160 251 aa4.29□□□□□ -1.72
CLK1-212ENST00000482590 SPATA12Q7Z6I5 190 aa4.29□□□□□ -1.72
CLK1-212ENST00000482590 BPIFA4PQ86YQ2 179 aa4.29□□□□□ -1.72
CLK1-212ENST00000482590 CEND1Q8N111 149 aa4.29□□□□□ -1.72
CLK1-212ENST00000482590 C15orf56Q8N910 161 aa4.29□□□□□ -1.72
CLK1-212ENST00000482590 FER1L6-AS1Q8NA97 138 aa4.29□□□□□ -1.72
CLK1-212ENST00000482590 OR10P1Q8NGE3 313 aa4.29□□□□□ -1.72
CLK1-212ENST00000482590 PYGO2Q9BRQ0 406 aa4.29□□□□□ -1.72
CLK1-212ENST00000482590 NPVFQ9HCQ7 196 aa4.29□□□□□ -1.72
CLK1-212ENST00000482590 A0A0J9YY99 117 aa4.28□□□□□ -1.72
CLK1-212ENST00000482590 C20orf202A1L168 122 aa4.28□□□□□ -1.72
CLK1-212ENST00000482590 FNDC10F2Z333 226 aa4.28□□□□□ -1.72
CLK1-212ENST00000482590 APCSP02743 223 aa4.28□□□□□ -1.72
CLK1-212ENST00000482590 PRB4P10163 310 aaPredicted RBP4.28□□□□□ -1.72
CLK1-212ENST00000482590 TAS2R45P59539 299 aa4.28□□□□□ -1.72
CLK1-212ENST00000482590 LUZP6Q538Z0 58 aa4.28□□□□□ -1.72
CLK1-212ENST00000482590 LINC00305Q7Z4B0 112 aa4.28□□□□□ -1.72
CLK1-212ENST00000482590 TNFSF18Q9UNG2 199 aa4.28□□□□□ -1.72
CLK1-212ENST00000482590 V9GYH0 126 aa4.28□□□□□ -1.72
CLK1-212ENST00000482590 NAP1L6A6NFF2 107 aa4.27□□□□□ -1.73
CLK1-212ENST00000482590 HIST1H2BOP23527 126 aa4.27□□□□□ -1.73
CLK1-212ENST00000482590 HIST1H2BBP33778 126 aa4.27□□□□□ -1.73
CLK1-212ENST00000482590 ZNF80P51504 273 aaPredicted RBP4.27□□□□□ -1.73
CLK1-212ENST00000482590 HIST1H2BDP58876 126 aa4.27□□□□□ -1.73
CLK1-212ENST00000482590 HIST1H2BCP62807 126 aa4.27□□□□□ -1.73
CLK1-212ENST00000482590 CCL20P78556 96 aa4.27□□□□□ -1.73
CLK1-212ENST00000482590 HIST2H2BEQ16778 126 aa4.27□□□□□ -1.73
CLK1-212ENST00000482590 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.27□□□□□ -1.73
CLK1-212ENST00000482590 AMMECR1LQ6DCA0 310 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms