RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 COX6A2Q02221 97 aa5.7□□□□□ -1.5
HLA-B-253ENST00000481849 C15orf56Q8N910 161 aa5.7□□□□□ -1.5
HLA-B-253ENST00000481849 OCC1Q8TAD7 63 aa5.7□□□□□ -1.5
HLA-B-253ENST00000481849 PHOX2AO14813 284 aa5.69□□□□□ -1.5
HLA-B-253ENST00000481849 APCSP02743 223 aa5.69□□□□□ -1.5
HLA-B-253ENST00000481849 CIRBPQ14011 172 aaKnown RBP5.69□□□□□ -1.5
HLA-B-253ENST00000481849 MAJINQ3KP22 176 aa5.69□□□□□ -1.5
HLA-B-253ENST00000481849 CFAP161Q6P656 301 aa5.69□□□□□ -1.5
HLA-B-253ENST00000481849 SMIM15Q7Z3B0 74 aa5.69□□□□□ -1.5
HLA-B-253ENST00000481849 SPACA4Q8TDM5 124 aa5.69□□□□□ -1.5
HLA-B-253ENST00000481849 GTSF1Q8WW33 167 aa5.69□□□□□ -1.5
HLA-B-253ENST00000481849 CHCHD10Q8WYQ3 142 aaPredicted RBP5.69□□□□□ -1.5
HLA-B-253ENST00000481849 MT1HL1P0DM35 61 aa5.68□□□□□ -1.5
HLA-B-253ENST00000481849 FGF6P10767 208 aa5.68□□□□□ -1.5
HLA-B-253ENST00000481849 CEBPGP53567 150 aa5.68□□□□□ -1.5
HLA-B-253ENST00000481849 CT83Q5H943 113 aa5.68□□□□□ -1.5
HLA-B-253ENST00000481849 PRSS3P2Q8NHM4 247 aa5.68□□□□□ -1.5
HLA-B-253ENST00000481849 LYPD6BQ8NI32 183 aa5.68□□□□□ -1.5
HLA-B-253ENST00000481849 CNFNQ9BYD5 112 aa5.68□□□□□ -1.5
HLA-B-253ENST00000481849 SDHAF1A6NFY7 115 aa5.67□□□□□ -1.5
HLA-B-253ENST00000481849 GATCO43716 136 aaKnown RBP5.67□□□□□ -1.5
HLA-B-253ENST00000481849 RPS10P46783 165 aaKnown RBP5.67□□□□□ -1.5
HLA-B-253ENST00000481849 XCL1P47992 114 aa5.67□□□□□ -1.5
HLA-B-253ENST00000481849 Q6ZRU5 148 aa5.67□□□□□ -1.5
HLA-B-253ENST00000481849 SLC51BQ86UW2 128 aa5.67□□□□□ -1.5
HLA-B-253ENST00000481849 C7orf33Q8WU49 177 aa5.67□□□□□ -1.5
HLA-B-253ENST00000481849 LINC00526Q96FQ7 95 aa5.67□□□□□ -1.5
HLA-B-253ENST00000481849 RNF185Q96GF1 192 aa5.67□□□□□ -1.5
HLA-B-253ENST00000481849 NDUFS6O75380 124 aaKnown RBP5.66□□□□□ -1.5
HLA-B-253ENST00000481849 GAS8-AS1O95177 125 aa5.66□□□□□ -1.5
HLA-B-253ENST00000481849 NCR2O95944 276 aa5.66□□□□□ -1.5
HLA-B-253ENST00000481849 PMCHP20382 165 aa5.66□□□□□ -1.5
HLA-B-253ENST00000481849 TAGLN2P37802 199 aaKnown RBP5.66□□□□□ -1.5
HLA-B-253ENST00000481849 TCTE3Q8IZS6 198 aa5.66□□□□□ -1.5
HLA-B-253ENST00000481849 STPG4Q8N801 248 aa5.66□□□□□ -1.5
HLA-B-253ENST00000481849 PLAC8Q9NZF1 115 aa5.66□□□□□ -1.5
HLA-B-253ENST00000481849 A0A096LNI7 61 aa5.65□□□□□ -1.5
HLA-B-253ENST00000481849 GVQW2A0A096LPI5 108 aaPredicted RBP5.65□□□□□ -1.5
HLA-B-253ENST00000481849 FAM231BA6NCW3 169 aa5.65□□□□□ -1.5
HLA-B-253ENST00000481849 I3L3M4 83 aa5.65□□□□□ -1.5
HLA-B-253ENST00000481849 CCL25O15444 150 aa5.65□□□□□ -1.5
HLA-B-253ENST00000481849 ALKAL2Q6UX46 152 aa5.65□□□□□ -1.5
HLA-B-253ENST00000481849 TMEM101Q96IK0 257 aa5.65□□□□□ -1.5
HLA-B-253ENST00000481849 BTF3L4Q96K17 158 aa5.65□□□□□ -1.5
HLA-B-253ENST00000481849 TMEM242Q9NWH2 141 aa5.65□□□□□ -1.5
HLA-B-253ENST00000481849 TNXBP22105 4242 aa5.64□□□□□ -1.51
HLA-B-253ENST00000481849 A8MWL6 223 aa5.64□□□□□ -1.51
HLA-B-253ENST00000481849 H7C423 109 aa5.64□□□□□ -1.51
HLA-B-253ENST00000481849 TSHBP01222 138 aa5.64□□□□□ -1.51
HLA-B-253ENST00000481849 ODF1Q14990 250 aa5.64□□□□□ -1.51
HLA-B-253ENST00000481849 TEX261Q6UWH6 196 aa5.64□□□□□ -1.51
HLA-B-253ENST00000481849 OR5A1Q8NGJ0 315 aa5.64□□□□□ -1.51
HLA-B-253ENST00000481849 BORCS7Q96B45 105 aa5.64□□□□□ -1.51
HLA-B-253ENST00000481849 ST20Q9HBF5 79 aa5.64□□□□□ -1.51
HLA-B-253ENST00000481849 LINC00959A0A1B0GUT2 108 aa5.63□□□□□ -1.51
HLA-B-253ENST00000481849 ZNF25P17030 456 aaPredicted RBP5.63□□□□□ -1.51
HLA-B-253ENST00000481849 PRR3P79522 188 aaKnown RBP5.63□□□□□ -1.51
HLA-B-253ENST00000481849 CARD19Q96LW7 228 aa5.63□□□□□ -1.51
HLA-B-253ENST00000481849 hCG_2014768A0A024R1R8 64 aa5.62□□□□□ -1.51
HLA-B-253ENST00000481849 IGHV1-58A0A0C4DH39 117 aa5.62□□□□□ -1.51
HLA-B-253ENST00000481849 TRBV6-5A0A0K0K1A5 114 aa5.62□□□□□ -1.51
HLA-B-253ENST00000481849 TMEM250H0YL14 139 aa5.62□□□□□ -1.51
HLA-B-253ENST00000481849 SMKR1H3BMG3 65 aa5.62□□□□□ -1.51
HLA-B-253ENST00000481849 ESDP10768 282 aa5.62□□□□□ -1.51
HLA-B-253ENST00000481849 SS18Q15532 418 aa5.62□□□□□ -1.51
HLA-B-253ENST00000481849 FAM231DQ6ZW35 169 aa5.62□□□□□ -1.51
HLA-B-253ENST00000481849 MRAP2Q96G30 205 aa5.62□□□□□ -1.51
HLA-B-253ENST00000481849 A0A1B0GUT8 65 aa5.61□□□□□ -1.51
HLA-B-253ENST00000481849 HIGD1CA8MV81 97 aa5.61□□□□□ -1.51
HLA-B-253ENST00000481849 RNASE13Q5GAN3 156 aaKnown RBP5.61□□□□□ -1.51
HLA-B-253ENST00000481849 AMN1Q8IY45 258 aa5.61□□□□□ -1.51
HLA-B-253ENST00000481849 SMIM7Q9BQ49 75 aa5.61□□□□□ -1.51
HLA-B-253ENST00000481849 EIF5A2Q9GZV4 153 aaKnown RBP5.61□□□□□ -1.51
HLA-B-253ENST00000481849 C7orf77A4D0Y5 90 aa5.6□□□□□ -1.51
HLA-B-253ENST00000481849 RAB4AP20338 218 aa5.6□□□□□ -1.51
HLA-B-253ENST00000481849 MALP21145 153 aa5.6□□□□□ -1.51
HLA-B-253ENST00000481849 FCER1GP30273 86 aa5.6□□□□□ -1.51
HLA-B-253ENST00000481849 SYCNQ0VAF6 134 aa5.6□□□□□ -1.51
HLA-B-253ENST00000481849 GAGE2BQ13066 116 aa5.6□□□□□ -1.51
HLA-B-253ENST00000481849 CD164L2Q6UWJ8 174 aa5.6□□□□□ -1.51
HLA-B-253ENST00000481849 LINC01551Q86U37 167 aa5.6□□□□□ -1.51
HLA-B-253ENST00000481849 AKAP14Q86UN6 197 aa5.6□□□□□ -1.51
HLA-B-253ENST00000481849 ZNF664Q8N3J9 261 aa5.6□□□□□ -1.51
HLA-B-253ENST00000481849 TSKUQ8WUA8 353 aa5.6□□□□□ -1.51
HLA-B-253ENST00000481849 TMEM191AQ9H0A3 160 aa5.6□□□□□ -1.51
HLA-B-253ENST00000481849 CDC42SE2Q9NRR3 84 aa5.6□□□□□ -1.51
HLA-B-253ENST00000481849 IGLV4-69A0A075B6H9 119 aa5.59□□□□□ -1.51
HLA-B-253ENST00000481849 TRBV27A0A0K0K1C4 114 aa5.59□□□□□ -1.51
HLA-B-253ENST00000481849 A0A1B0GVG6 124 aa5.59□□□□□ -1.51
HLA-B-253ENST00000481849 ZNF727A8MUV8 499 aa5.59□□□□□ -1.51
HLA-B-253ENST00000481849 CAMPP49913 170 aa5.59□□□□□ -1.51
HLA-B-253ENST00000481849 POLR2KP53803 58 aaKnown RBP5.59□□□□□ -1.51
HLA-B-253ENST00000481849 MRPL52Q86TS9 123 aaKnown RBP5.59□□□□□ -1.51
HLA-B-253ENST00000481849 LINC01600Q96MT4 127 aa5.59□□□□□ -1.51
HLA-B-253ENST00000481849 LINC00474Q9P2X8 69 aa5.59□□□□□ -1.51
HLA-B-253ENST00000481849 TRAV13-1A0A0B4J241 112 aa5.58□□□□□ -1.52
HLA-B-253ENST00000481849 COX7A2LO14548 114 aa5.58□□□□□ -1.52
HLA-B-253ENST00000481849 VCYO14598 125 aa5.58□□□□□ -1.52
HLA-B-253ENST00000481849 RIGQ13278 110 aa5.58□□□□□ -1.52
HLA-B-253ENST00000481849 NUP35Q8NFH5 326 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms