RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 I3L3M4 83 aa13.22□□□□□ -0.29
VPS36-204ENST00000480923 KIAA1644Q3SXP7 199 aa13.22□□□□□ -0.29
VPS36-204ENST00000480923 AMMECR1LQ6DCA0 310 aa13.22□□□□□ -0.29
VPS36-204ENST00000480923 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.21□□□□□ -0.29
VPS36-204ENST00000480923 IGKV2-29A2NJV5 120 aaPredicted RBP13.21□□□□□ -0.29
VPS36-204ENST00000480923 USP17L23D6RBM5 183 aa13.21□□□□□ -0.29
VPS36-204ENST00000480923 HAMPP81172 84 aa13.21□□□□□ -0.29
VPS36-204ENST00000480923 PRELID3AQ96N28 172 aa13.21□□□□□ -0.29
VPS36-204ENST00000480923 LAMTOR2Q9Y2Q5 125 aa13.21□□□□□ -0.29
VPS36-204ENST00000480923 PHOX2AO14813 284 aa13.2□□□□□ -0.3
VPS36-204ENST00000480923 TRGC2P03986 189 aa13.2□□□□□ -0.3
VPS36-204ENST00000480923 TRAV8-4A0A0B4J246 113 aa13.19□□□□□ -0.3
VPS36-204ENST00000480923 LINC01620Q4KN68 170 aa13.19□□□□□ -0.3
VPS36-204ENST00000480923 RNASEKQ6P5S7 137 aaKnown RBP13.19□□□□□ -0.3
VPS36-204ENST00000480923 NRACQ8N912 160 aa13.19□□□□□ -0.3
VPS36-204ENST00000480923 FAM30AQ9NZY2 134 aa13.19□□□□□ -0.3
VPS36-204ENST00000480923 TNFRSF6BO95407 300 aa13.18□□□□□ -0.3
VPS36-204ENST00000480923 KRTAP26-1Q6PEX3 210 aa13.18□□□□□ -0.3
VPS36-204ENST00000480923 ALKBH7Q9BT30 221 aaPredicted RBP13.18□□□□□ -0.3
VPS36-204ENST00000480923 IGKV3OR2-268A0A0C4DH90 116 aa13.17□□□□□ -0.3
VPS36-204ENST00000480923 EPM2AB3EWF7 344 aa13.17□□□□□ -0.3
VPS36-204ENST00000480923 H7C423 109 aa13.17□□□□□ -0.3
VPS36-204ENST00000480923 TSHBP01222 138 aa13.17□□□□□ -0.3
VPS36-204ENST00000480923 FGF6P10767 208 aa13.17□□□□□ -0.3
VPS36-204ENST00000480923 POLR2KP53803 58 aaKnown RBP13.17□□□□□ -0.3
VPS36-204ENST00000480923 C20orf78Q9BR46 151 aa13.17□□□□□ -0.3
VPS36-204ENST00000480923 NPYP01303 97 aa13.16□□□□□ -0.3
VPS36-204ENST00000480923 TRBV27A0A0K0K1C4 114 aa13.15□□□□□ -0.3
VPS36-204ENST00000480923 SMR3BP02814 79 aaPredicted RBP13.15□□□□□ -0.3
VPS36-204ENST00000480923 SUMO2P61956 95 aaKnown RBP13.15□□□□□ -0.3
VPS36-204ENST00000480923 VCYO14598 125 aa13.14□□□□□ -0.31
VPS36-204ENST00000480923 PRSS1P07477 247 aa13.14□□□□□ -0.31
VPS36-204ENST00000480923 TMEM101Q96IK0 257 aa13.14□□□□□ -0.31
VPS36-204ENST00000480923 MAP1LC3AQ9H492 121 aa13.14□□□□□ -0.31
VPS36-204ENST00000480923 ESDP10768 282 aa13.13□□□□□ -0.31
VPS36-204ENST00000480923 ZNF25P17030 456 aaPredicted RBP13.13□□□□□ -0.31
VPS36-204ENST00000480923 FCER1GP30273 86 aa13.13□□□□□ -0.31
VPS36-204ENST00000480923 PRSS47A8MTI9 375 aa13.12□□□□□ -0.31
VPS36-204ENST00000480923 C1orf196B1AJZ1 125 aa13.12□□□□□ -0.31
VPS36-204ENST00000480923 RPL32P62910 135 aaKnown RBP13.12□□□□□ -0.31
VPS36-204ENST00000480923 Q5VSD8 79 aa13.12□□□□□ -0.31
VPS36-204ENST00000480923 FAT1Q14517 4588 aa13.12□□□□□ -0.31
VPS36-204ENST00000480923 DNAH8Q96JB1 4490 aa13.11□□□□□ -0.31
VPS36-204ENST00000480923 LOC389332A0A1B0GUA5 103 aa13.11□□□□□ -0.31
VPS36-204ENST00000480923 GAGE12HA6NDE8 117 aa13.11□□□□□ -0.31
VPS36-204ENST00000480923 Q6ZSA8 131 aa13.11□□□□□ -0.31
VPS36-204ENST00000480923 OR5A1Q8NGJ0 315 aa13.11□□□□□ -0.31
VPS36-204ENST00000480923 KIR2DL4Q99706 377 aa13.1□□□□□ -0.31
VPS36-204ENST00000480923 SMIM2Q9BVW6 85 aa13.1□□□□□ -0.31
VPS36-204ENST00000480923 DGAT2L7PQ6IED9 249 aa13.09□□□□□ -0.31
VPS36-204ENST00000480923 C18orf32Q8TCD1 76 aa13.09□□□□□ -0.31
VPS36-204ENST00000480923 CHCHD10Q8WYQ3 142 aaPredicted RBP13.09□□□□□ -0.31
VPS36-204ENST00000480923 NXT2Q9NPJ8 142 aaKnown RBP13.09□□□□□ -0.31
VPS36-204ENST00000480923 hDV102S1A0JD36 115 aa13.08□□□□□ -0.32
VPS36-204ENST00000480923 FAM229AH3BQW9 127 aa13.08□□□□□ -0.32
VPS36-204ENST00000480923 Q8N8P6 123 aa13.08□□□□□ -0.32
VPS36-204ENST00000480923 PRSS3P2Q8NHM4 247 aa13.08□□□□□ -0.32
VPS36-204ENST00000480923 TCAPO15273 167 aa13.07□□□□□ -0.32
VPS36-204ENST00000480923 MRPL52Q86TS9 123 aaKnown RBP13.07□□□□□ -0.32
VPS36-204ENST00000480923 IFI27P40305 119 aaPredicted RBP13.06□□□□□ -0.32
VPS36-204ENST00000480923 RAB5BP61020 215 aa13.06□□□□□ -0.32
VPS36-204ENST00000480923 AP5S1Q9NUS5 200 aa13.06□□□□□ -0.32
VPS36-204ENST00000480923 HIST1H2BKO60814 126 aa13.05□□□□□ -0.32
VPS36-204ENST00000480923 HIST1H2BJP06899 126 aa13.05□□□□□ -0.32
VPS36-204ENST00000480923 HIST1H2BOP23527 126 aa13.05□□□□□ -0.32
VPS36-204ENST00000480923 HIST1H2BBP33778 126 aa13.05□□□□□ -0.32
VPS36-204ENST00000480923 HIST1H2BDP58876 126 aa13.05□□□□□ -0.32
VPS36-204ENST00000480923 HIST1H2BCP62807 126 aa13.05□□□□□ -0.32
VPS36-204ENST00000480923 HIST2H2BEQ16778 126 aa13.05□□□□□ -0.32
VPS36-204ENST00000480923 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.05□□□□□ -0.32
VPS36-204ENST00000480923 CFAP161Q6P656 301 aa13.05□□□□□ -0.32
VPS36-204ENST00000480923 FA2HQ7L5A8 372 aa13.05□□□□□ -0.32
VPS36-204ENST00000480923 BAGE3Q86Y29 109 aa13.05□□□□□ -0.32
VPS36-204ENST00000480923 HIST1H2BHQ93079 126 aa13.05□□□□□ -0.32
VPS36-204ENST00000480923 HIST1H2BNQ99877 126 aa13.05□□□□□ -0.32
VPS36-204ENST00000480923 HIST1H2BMQ99879 126 aa13.05□□□□□ -0.32
VPS36-204ENST00000480923 LINC00959A0A1B0GUT2 108 aa13.04□□□□□ -0.32
VPS36-204ENST00000480923 K7EMI3 77 aa13.04□□□□□ -0.32
VPS36-204ENST00000480923 SMAGPQ0VAQ4 97 aa13.04□□□□□ -0.32
VPS36-204ENST00000480923 SCXQ7RTU7 201 aa13.04□□□□□ -0.32
VPS36-204ENST00000480923 ZNF664Q8N3J9 261 aa13.04□□□□□ -0.32
VPS36-204ENST00000480923 C9orf163Q8N9P6 203 aa13.04□□□□□ -0.32
VPS36-204ENST00000480923 CDC42SE2Q9NRR3 84 aa13.04□□□□□ -0.32
VPS36-204ENST00000480923 XCL1P47992 114 aa13.03□□□□□ -0.32
VPS36-204ENST00000480923 TMEM18Q96B42 140 aa13.03□□□□□ -0.32
VPS36-204ENST00000480923 CHAC1Q9BUX1 264 aa13.03□□□□□ -0.32
VPS36-204ENST00000480923 CCL25O15444 150 aa13.02□□□□□ -0.33
VPS36-204ENST00000480923 LINC00614P0C842 121 aa13.02□□□□□ -0.33
VPS36-204ENST00000480923 INAFM2P0DMQ5 153 aa13.02□□□□□ -0.33
VPS36-204ENST00000480923 CNBPP62633 177 aaKnown RBP13.02□□□□□ -0.33
VPS36-204ENST00000480923 SS18Q15532 418 aa13.02□□□□□ -0.33
VPS36-204ENST00000480923 C15orf56Q8N910 161 aa13.02□□□□□ -0.33
VPS36-204ENST00000480923 UBE2D4Q9Y2X8 147 aa13.02□□□□□ -0.33
VPS36-204ENST00000480923 FOXI1Q12951 378 aa13.01□□□□□ -0.33
VPS36-204ENST00000480923 HIGD2BQ4VC39 106 aa13.01□□□□□ -0.33
VPS36-204ENST00000480923 ORMDL2Q53FV1 153 aa13.01□□□□□ -0.33
VPS36-204ENST00000480923 TRAV16A0A0A6YYK6 109 aaPredicted RBP13□□□□□ -0.33
VPS36-204ENST00000480923 LINC01546A6NGU7 62 aa13□□□□□ -0.33
VPS36-204ENST00000480923 LINC00528Q8N1L1 170 aa13□□□□□ -0.33
VPS36-204ENST00000480923 CIRBP-AS1Q8TBR5 109 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms