RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 IGLV1-40P01703 118 aa7.66□□□□□ -1.18
SIK3-210ENST00000480468 DGAT2L7PQ6IED9 249 aa7.66□□□□□ -1.18
SIK3-210ENST00000480468 IGHV3-53P01767 116 aa7.66□□□□□ -1.18
SIK3-210ENST00000480468 UCNP55089 124 aa7.65□□□□□ -1.18
SIK3-210ENST00000480468 FHL2Q14192 279 aa7.65□□□□□ -1.18
SIK3-210ENST00000480468 C9orf129Q5T035 196 aaKnown RBP7.65□□□□□ -1.18
SIK3-210ENST00000480468 A0A087WYN8 130 aa7.64□□□□□ -1.19
SIK3-210ENST00000480468 EDN2P20800 178 aa7.64□□□□□ -1.19
SIK3-210ENST00000480468 GRNP28799 593 aaKnown RBP7.64□□□□□ -1.19
SIK3-210ENST00000480468 HOXD3P31249 432 aaPredicted RBP7.64□□□□□ -1.19
SIK3-210ENST00000480468 Q6ZSN1 163 aa7.64□□□□□ -1.19
SIK3-210ENST00000480468 LINC00337Q8N6G1 96 aa7.64□□□□□ -1.19
SIK3-210ENST00000480468 RS1O15537 224 aa7.64□□□□□ -1.19
SIK3-210ENST00000480468 Q9UF83 564 aa7.64□□□□□ -1.19
SIK3-210ENST00000480468 DOPEY2Q9Y3R5 2298 aa7.64□□□□□ -1.19
SIK3-210ENST00000480468 LRBAP50851 2863 aa7.64□□□□□ -1.19
SIK3-210ENST00000480468 PSMB8P28062 276 aa7.63□□□□□ -1.19
SIK3-210ENST00000480468 MGAQ8IWI9 3026 aa7.63□□□□□ -1.19
SIK3-210ENST00000480468 ANKRD11Q6UB99 2663 aaPredicted RBP7.63□□□□□ -1.19
SIK3-210ENST00000480468 IGKV2-28A0A075B6P5 120 aa7.63□□□□□ -1.19
SIK3-210ENST00000480468 IGKV2D-28P01615 120 aa7.63□□□□□ -1.19
SIK3-210ENST00000480468 CCKP06307 115 aa7.63□□□□□ -1.19
SIK3-210ENST00000480468 RBMY1A1P0DJD3 496 aaKnown RBP7.63□□□□□ -1.19
SIK3-210ENST00000480468 RBMY1CP0DJD4 496 aa7.63□□□□□ -1.19
SIK3-210ENST00000480468 LMO4P61968 165 aa7.63□□□□□ -1.19
SIK3-210ENST00000480468 RBMY1FQ15415 496 aaKnown RBP7.63□□□□□ -1.19
SIK3-210ENST00000480468 SMIM11BQ8TCY0 68 aa7.63□□□□□ -1.19
SIK3-210ENST00000480468 TRBV10-3A0A0K0K1G6 114 aa7.62□□□□□ -1.19
SIK3-210ENST00000480468 BCE1O60756 84 aa7.62□□□□□ -1.19
SIK3-210ENST00000480468 CFHR3Q02985 330 aa7.62□□□□□ -1.19
SIK3-210ENST00000480468 LYPD5Q6UWN5 251 aa7.62□□□□□ -1.19
SIK3-210ENST00000480468 PRO0628Q9UI54 55 aa7.62□□□□□ -1.19
SIK3-210ENST00000480468 KNCNA6PVL3 124 aa7.62□□□□□ -1.19
SIK3-210ENST00000480468 A8MTW9 85 aa7.62□□□□□ -1.19
SIK3-210ENST00000480468 GHRHP01286 108 aa7.62□□□□□ -1.19
SIK3-210ENST00000480468 SND1-IT1Q9HBX3 110 aa7.62□□□□□ -1.19
SIK3-210ENST00000480468 SERP1Q9Y6X1 66 aa7.62□□□□□ -1.19
SIK3-210ENST00000480468 ACACAQ13085 2346 aa7.61□□□□□ -1.19
SIK3-210ENST00000480468 IGHV3-38A0A0C4DH36 116 aa7.61□□□□□ -1.19
SIK3-210ENST00000480468 FAM236DA0A1B0GTK5 79 aa7.61□□□□□ -1.19
SIK3-210ENST00000480468 RBMY1BA6NDE4 496 aaKnown RBP7.61□□□□□ -1.19
SIK3-210ENST00000480468 RBMY1EA6NEQ0 496 aaKnown RBP7.61□□□□□ -1.19
SIK3-210ENST00000480468 RBMY1DP0C7P1 496 aaKnown RBP7.61□□□□□ -1.19
SIK3-210ENST00000480468 FAM236CP0DP71 79 aa7.61□□□□□ -1.19
SIK3-210ENST00000480468 C10orf105Q8TEF2 133 aa7.61□□□□□ -1.19
SIK3-210ENST00000480468 A6NDX4 124 aa7.6□□□□□ -1.19
SIK3-210ENST00000480468 PFN2P35080 140 aa7.6□□□□□ -1.19
SIK3-210ENST00000480468 TMEM243Q9BU79 118 aa7.6□□□□□ -1.19
SIK3-210ENST00000480468 MUC3AQ02505 3323 aa7.6□□□□□ -1.19
SIK3-210ENST00000480468 SPTBN1Q01082 2364 aaKnown RBP7.6□□□□□ -1.19
SIK3-210ENST00000480468 DMXL1Q9Y485 3027 aa7.6□□□□□ -1.19
SIK3-210ENST00000480468 NCR3O14931 201 aa7.59□□□□□ -1.19
SIK3-210ENST00000480468 LECT2O14960 151 aa7.59□□□□□ -1.19
SIK3-210ENST00000480468 MIR7-3HGQ8N6C7 128 aa7.59□□□□□ -1.19
SIK3-210ENST00000480468 ORMDL1Q9P0S3 153 aa7.59□□□□□ -1.19
SIK3-210ENST00000480468 BSNQ9UPA5 3926 aa7.59□□□□□ -1.19
SIK3-210ENST00000480468 JMJD7-PLA2G4BH0Y9G9 81 aa7.59□□□□□ -1.19
SIK3-210ENST00000480468 SS18Q15532 418 aa7.59□□□□□ -1.19
SIK3-210ENST00000480468 XCL1P47992 114 aa7.58□□□□□ -1.2
SIK3-210ENST00000480468 LINC00167Q96N53 147 aa7.58□□□□□ -1.2
SIK3-210ENST00000480468 XCL2Q9UBD3 114 aa7.58□□□□□ -1.2
SIK3-210ENST00000480468 HRNRQ86YZ3 2850 aaPredicted RBP7.58□□□□□ -1.2
SIK3-210ENST00000480468 OTOGLQ3ZCN5 2332 aa7.58□□□□□ -1.2
SIK3-210ENST00000480468 CDC42SE2Q9NRR3 84 aa7.58□□□□□ -1.2
SIK3-210ENST00000480468 HILS1P60008 231 aa7.57□□□□□ -1.2
SIK3-210ENST00000480468 C11orf72Q8NBR9 251 aa7.57□□□□□ -1.2
SIK3-210ENST00000480468 LY6G6DO95868 133 aa7.56□□□□□ -1.2
SIK3-210ENST00000480468 HTN1P15515 57 aa7.56□□□□□ -1.2
SIK3-210ENST00000480468 CCL18P55774 89 aa7.56□□□□□ -1.2
SIK3-210ENST00000480468 BLCAPP62952 87 aa7.56□□□□□ -1.2
SIK3-210ENST00000480468 LY6EQ16553 131 aa7.56□□□□□ -1.2
SIK3-210ENST00000480468 C20orf197Q8N268 126 aa7.56□□□□□ -1.2
SIK3-210ENST00000480468 COX7B2Q8TF08 81 aa7.56□□□□□ -1.2
SIK3-210ENST00000480468 Q96MF0 132 aa7.56□□□□□ -1.2
SIK3-210ENST00000480468 TMEM89A2RUT3 159 aa7.56□□□□□ -1.2
SIK3-210ENST00000480468 H7BZZ5 65 aa7.56□□□□□ -1.2
SIK3-210ENST00000480468 RPL36AP83881 106 aaKnown RBP7.56□□□□□ -1.2
SIK3-210ENST00000480468 RPL36ALQ969Q0 106 aaKnown RBP7.56□□□□□ -1.2
SIK3-210ENST00000480468 BPESC1Q9GZL8 116 aa7.56□□□□□ -1.2
SIK3-210ENST00000480468 TRAV7A0A075B6U4 112 aa7.55□□□□□ -1.2
SIK3-210ENST00000480468 TRAV23DV6A0A075B6W5 121 aa7.55□□□□□ -1.2
SIK3-210ENST00000480468 IBA57-AS1B1ANH7 110 aa7.55□□□□□ -1.2
SIK3-210ENST00000480468 H3BUX3 64 aa7.55□□□□□ -1.2
SIK3-210ENST00000480468 BRD3OSQ6XYD6 125 aa7.55□□□□□ -1.2
SIK3-210ENST00000480468 BDP1A6H8Y1 2624 aa7.55□□□□□ -1.2
SIK3-210ENST00000480468 TRBV10-1A0A0K0K1A3 114 aa7.55□□□□□ -1.2
SIK3-210ENST00000480468 COL6A6A6NMZ7 2263 aa7.54□□□□□ -1.2
SIK3-210ENST00000480468 EP300Q09472 2414 aaPredicted RBP7.54□□□□□ -1.2
SIK3-210ENST00000480468 CCL21O00585 134 aa7.54□□□□□ -1.2
SIK3-210ENST00000480468 KLKP1Q107X0 134 aa7.54□□□□□ -1.2
SIK3-210ENST00000480468 LINC00336Q6ZUF6 198 aa7.54□□□□□ -1.2
SIK3-210ENST00000480468 ENHOQ6UWT2 76 aa7.54□□□□□ -1.2
SIK3-210ENST00000480468 FAM19A1Q7Z5A9 133 aa7.54□□□□□ -1.2
SIK3-210ENST00000480468 UBL5Q9BZL1 73 aa7.54□□□□□ -1.2
SIK3-210ENST00000480468 SMIM26A0A096LP01 95 aa7.53□□□□□ -1.2
SIK3-210ENST00000480468 TRBV6-4A0A1B0GX49 114 aa7.53□□□□□ -1.2
SIK3-210ENST00000480468 LINC00158P58513 81 aa7.53□□□□□ -1.2
SIK3-210ENST00000480468 CDSNQ15517 529 aa7.53□□□□□ -1.2
SIK3-210ENST00000480468 GVINP1Q7Z2Y8 2422 aa7.53□□□□□ -1.2
SIK3-210ENST00000480468 TMEM256-PLSCR3K7ERE1 68 aa7.52□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 131.7 ms