RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 RBMY1EA6NEQ0 496 aaKnown RBP14.96□□□□□ -0.01
COL13A1-208ENST00000479733 RBMY1DP0C7P1 496 aaKnown RBP14.96□□□□□ -0.01
COL13A1-208ENST00000479733 DEFB136Q30KP8 78 aa14.96□□□□□ -0.01
COL13A1-208ENST00000479733 MSMBP08118 114 aa14.96□□□□□ -0.01
COL13A1-208ENST00000479733 BAALC-AS2P0C853 105 aa14.96□□□□□ -0.02
COL13A1-208ENST00000479733 MYO9AB2RTY4 2548 aa14.95□□□□□ -0.02
COL13A1-208ENST00000479733 PRIMA1Q86XR5 153 aa14.95□□□□□ -0.02
COL13A1-208ENST00000479733 C10orf105Q8TEF2 133 aa14.95□□□□□ -0.02
COL13A1-208ENST00000479733 ATP5J2P56134 94 aa14.94□□□□□ -0.02
COL13A1-208ENST00000479733 DEFB112Q30KQ8 113 aa14.94□□□□□ -0.02
COL13A1-208ENST00000479733 PIK3CD-AS1Q5SR53 167 aa14.94□□□□□ -0.02
COL13A1-208ENST00000479733 Q9HAA7 133 aa14.94□□□□□ -0.02
COL13A1-208ENST00000479733 LINC00694P0DN24 101 aa14.94□□□□□ -0.02
COL13A1-208ENST00000479733 LINC00242Q5T6M2 205 aa14.94□□□□□ -0.02
COL13A1-208ENST00000479733 ZNF415Q09FC8 603 aa14.93□□□□□ -0.02
COL13A1-208ENST00000479733 CCL19Q99731 98 aa14.93□□□□□ -0.02
COL13A1-208ENST00000479733 EDA2RQ9HAV5 297 aa14.93□□□□□ -0.02
COL13A1-208ENST00000479733 PIEZO1Q92508 2521 aa14.93□□□□□ -0.02
COL13A1-208ENST00000479733 FAM218AQ96MZ4 157 aa14.93□□□□□ -0.02
COL13A1-208ENST00000479733 TIRAPP58753 221 aa14.92□□□□□ -0.02
COL13A1-208ENST00000479733 HIST2H2BDQ6DRA6 164 aa14.92□□□□□ -0.02
COL13A1-208ENST00000479733 SLURP1P55000 103 aa14.92□□□□□ -0.02
COL13A1-208ENST00000479733 C9orf153Q5TBE3 101 aa14.92□□□□□ -0.02
COL13A1-208ENST00000479733 POLQO75417 2590 aa14.92□□□□□ -0.02
COL13A1-208ENST00000479733 GAGE2AQ6NT46 116 aa14.91□□□□□ -0.02
COL13A1-208ENST00000479733 C18orf65Q6ZTR6 163 aa14.91□□□□□ -0.02
COL13A1-208ENST00000479733 IGHV3-53P01767 116 aa14.91□□□□□ -0.02
COL13A1-208ENST00000479733 ACYP1P07311 99 aa14.91□□□□□ -0.02
COL13A1-208ENST00000479733 USP9XQ93008 2570 aaPredicted RBP14.91□□□□□ -0.02
COL13A1-208ENST00000479733 RS1O15537 224 aa14.9□□□□□ -0.02
COL13A1-208ENST00000479733 CENPEQ02224 2701 aa14.9□□□□□ -0.02
COL13A1-208ENST00000479733 UTP20O75691 2785 aaKnown RBP14.9□□□□□ -0.02
COL13A1-208ENST00000479733 LINC00643Q86TS7 51 aa14.89□□□□□ -0.03
COL13A1-208ENST00000479733 PPDPFQ9H3Y8 114 aa14.89□□□□□ -0.03
COL13A1-208ENST00000479733 IGLV5-45A0A087WSX0 123 aa14.89□□□□□ -0.03
COL13A1-208ENST00000479733 SMIM1B2RUZ4 78 aa14.89□□□□□ -0.03
COL13A1-208ENST00000479733 HERVK_113P63121 156 aa14.89□□□□□ -0.03
COL13A1-208ENST00000479733 MXRA5Q9NR99 2828 aa14.88□□□□□ -0.03
COL13A1-208ENST00000479733 WNK1Q9H4A3 2382 aa14.88□□□□□ -0.03
COL13A1-208ENST00000479733 IGLV5-39A0A0G2JS06 123 aa14.88□□□□□ -0.03
COL13A1-208ENST00000479733 KLK5Q9Y337 293 aaPredicted RBP14.87□□□□□ -0.03
COL13A1-208ENST00000479733 GNLYP22749 145 aa14.87□□□□□ -0.03
COL13A1-208ENST00000479733 MAPK1IP1LQ8NDC0 245 aa14.87□□□□□ -0.03
COL13A1-208ENST00000479733 TMEM126AQ9H061 195 aa14.87□□□□□ -0.03
COL13A1-208ENST00000479733 UCNP55089 124 aa14.86□□□□□ -0.03
COL13A1-208ENST00000479733 C22orf24Q9Y442 160 aa14.86□□□□□ -0.03
COL13A1-208ENST00000479733 C11orf72Q8NBR9 251 aa14.86□□□□□ -0.03
COL13A1-208ENST00000479733 IMUPQ9GZP8 106 aa14.86□□□□□ -0.03
COL13A1-208ENST00000479733 XCL2Q9UBD3 114 aa14.86□□□□□ -0.03
COL13A1-208ENST00000479733 FLNCQ14315 2725 aa14.86□□□□□ -0.03
COL13A1-208ENST00000479733 BEAN1Q3B7T3 259 aa14.86□□□□□ -0.03
COL13A1-208ENST00000479733 RNF152Q8N8N0 203 aa14.85□□□□□ -0.03
COL13A1-208ENST00000479733 TMEM89A2RUT3 159 aa14.84□□□□□ -0.03
COL13A1-208ENST00000479733 C3orf22Q8N5N4 141 aa14.84□□□□□ -0.03
COL13A1-208ENST00000479733 NRGNQ92686 78 aa14.84□□□□□ -0.03
COL13A1-208ENST00000479733 DNAJC30Q96LL9 226 aa14.84□□□□□ -0.03
COL13A1-208ENST00000479733 UBE2E2Q96LR5 201 aa14.84□□□□□ -0.03
COL13A1-208ENST00000479733 VPREB3Q9UKI3 123 aa14.84□□□□□ -0.03
COL13A1-208ENST00000479733 TRGV1A0A0A0MS02 117 aa14.83□□□□□ -0.03
COL13A1-208ENST00000479733 TRACP01848 142 aa14.83□□□□□ -0.03
COL13A1-208ENST00000479733 IGKV3OR2-268A0A0C4DH90 116 aa14.82□□□□□ -0.04
COL13A1-208ENST00000479733 B4DSR2 109 aa14.82□□□□□ -0.04
COL13A1-208ENST00000479733 KHDC1LQ5JSQ8 128 aa14.82□□□□□ -0.04
COL13A1-208ENST00000479733 TOMM7Q9P0U1 55 aa14.82□□□□□ -0.04
COL13A1-208ENST00000479733 LOC107984640A0A0U1RRK4 108 aa14.81□□□□□ -0.04
COL13A1-208ENST00000479733 COPS9Q8WXC6 57 aa14.81□□□□□ -0.04
COL13A1-208ENST00000479733 PKD1L2Q7Z442 2459 aa14.8□□□□□ -0.04
COL13A1-208ENST00000479733 NTM-AS1Q6ZSK4 140 aa14.8□□□□□ -0.04
COL13A1-208ENST00000479733 Q96MF0 132 aa14.8□□□□□ -0.04
COL13A1-208ENST00000479733 CHD6Q8TD26 2715 aa14.8□□□□□ -0.04
COL13A1-208ENST00000479733 C9orf129Q5T035 196 aaKnown RBP14.8□□□□□ -0.04
COL13A1-208ENST00000479733 JMJD1CQ15652 2540 aa14.8□□□□□ -0.04
COL13A1-208ENST00000479733 SDIM1Q6ZPB5 146 aa14.79□□□□□ -0.04
COL13A1-208ENST00000479733 UQCRQO14949 82 aa14.79□□□□□ -0.04
COL13A1-208ENST00000479733 MALP21145 153 aa14.79□□□□□ -0.04
COL13A1-208ENST00000479733 HIST2H2BCQ6DN03 193 aa14.79□□□□□ -0.04
COL13A1-208ENST00000479733 MAP6D1Q9H9H5 199 aa14.79□□□□□ -0.04
COL13A1-208ENST00000479733 PEMTQ9UBM1 199 aa14.79□□□□□ -0.04
COL13A1-208ENST00000479733 SETD2Q9BYW2 2564 aaPredicted RBP14.79□□□□□ -0.04
COL13A1-208ENST00000479733 INSP01308 110 aa14.78□□□□□ -0.04
COL13A1-208ENST00000479733 MIR7-3HGQ8N6C7 128 aa14.78□□□□□ -0.04
COL13A1-208ENST00000479733 LINC00337Q8N6G1 96 aa14.78□□□□□ -0.04
COL13A1-208ENST00000479733 F5H768 121 aa14.77□□□□□ -0.04
COL13A1-208ENST00000479733 CRPP02741 224 aa14.77□□□□□ -0.04
COL13A1-208ENST00000479733 C14orf132Q9NPU4 83 aa14.77□□□□□ -0.04
COL13A1-208ENST00000479733 TLN2Q9Y4G6 2542 aa14.77□□□□□ -0.05
COL13A1-208ENST00000479733 ATP5G1P05496 136 aa14.77□□□□□ -0.05
COL13A1-208ENST00000479733 A0A087WYN8 130 aa14.76□□□□□ -0.05
COL13A1-208ENST00000479733 INAFM2P0DMQ5 153 aa14.76□□□□□ -0.05
COL13A1-208ENST00000479733 DYNLRB2Q8TF09 96 aa14.76□□□□□ -0.05
COL13A1-208ENST00000479733 FBN2P35556 2912 aa14.76□□□□□ -0.05
COL13A1-208ENST00000479733 IGKV3D-7A0A0C4DH55 119 aa14.76□□□□□ -0.05
COL13A1-208ENST00000479733 RPL36AP83881 106 aaKnown RBP14.76□□□□□ -0.05
COL13A1-208ENST00000479733 RPL36ALQ969Q0 106 aaKnown RBP14.76□□□□□ -0.05
COL13A1-208ENST00000479733 PRORYQ9H606 182 aa14.76□□□□□ -0.05
COL13A1-208ENST00000479733 DNAL4O96015 105 aa14.76□□□□□ -0.05
COL13A1-208ENST00000479733 CDC42SE2Q9NRR3 84 aa14.76□□□□□ -0.05
COL13A1-208ENST00000479733 CACNA1AO00555 2505 aa14.75□□□□□ -0.05
COL13A1-208ENST00000479733 Q6ZTI0 123 aa14.75□□□□□ -0.05
COL13A1-208ENST00000479733 C5orf38Q86SI9 138 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms