RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 NUP35Q8NFH5 326 aa8.33□□□□□ -1.08
ABCF1-206ENST00000479542 PRSS3P2Q8NHM4 247 aa8.33□□□□□ -1.08
ABCF1-206ENST00000479542 TMEM191AQ9H0A3 160 aa8.33□□□□□ -1.08
ABCF1-206ENST00000479542 SMDT1Q9H4I9 107 aa8.33□□□□□ -1.08
ABCF1-206ENST00000479542 GAGE12HA6NDE8 117 aa8.32□□□□□ -1.08
ABCF1-206ENST00000479542 SDHAF1A6NFY7 115 aa8.32□□□□□ -1.08
ABCF1-206ENST00000479542 GAS8-AS1O95177 125 aa8.32□□□□□ -1.08
ABCF1-206ENST00000479542 SRSF9Q13242 221 aaKnown RBP eCLIP8.32□□□□□ -1.08
ABCF1-206ENST00000479542 TRBV6-5A0A0K0K1A5 114 aa8.31□□□□□ -1.08
ABCF1-206ENST00000479542 ZNF25P17030 456 aaPredicted RBP8.31□□□□□ -1.08
ABCF1-206ENST00000479542 RAB4AP20338 218 aa8.31□□□□□ -1.08
ABCF1-206ENST00000479542 RIGQ13278 110 aa8.31□□□□□ -1.08
ABCF1-206ENST00000479542 MAJINQ3KP22 176 aa8.31□□□□□ -1.08
ABCF1-206ENST00000479542 REG3GQ6UW15 175 aa8.31□□□□□ -1.08
ABCF1-206ENST00000479542 STPG4Q8N801 248 aa8.31□□□□□ -1.08
ABCF1-206ENST00000479542 CHCHD10Q8WYQ3 142 aaPredicted RBP8.31□□□□□ -1.08
ABCF1-206ENST00000479542 RNF213Q63HN8 5207 aa8.31□□□□□ -1.08
ABCF1-206ENST00000479542 AMN1Q8IY45 258 aa8.3□□□□□ -1.08
ABCF1-206ENST00000479542 NAT8BQ9UHF3 227 aa8.3□□□□□ -1.08
ABCF1-206ENST00000479542 SMIM27A0A1W2PRY6 76 aa8.29□□□□□ -1.08
ABCF1-206ENST00000479542 I3L3M4 83 aa8.29□□□□□ -1.08
ABCF1-206ENST00000479542 APCSP02743 223 aa8.29□□□□□ -1.08
ABCF1-206ENST00000479542 PMCHP20382 165 aa8.29□□□□□ -1.08
ABCF1-206ENST00000479542 FOXI1Q12951 378 aa8.29□□□□□ -1.08
ABCF1-206ENST00000479542 OR5A1Q8NGJ0 315 aa8.29□□□□□ -1.08
ABCF1-206ENST00000479542 MRAP2Q96G30 205 aa8.29□□□□□ -1.08
ABCF1-206ENST00000479542 ST20Q9HBF5 79 aa8.29□□□□□ -1.08
ABCF1-206ENST00000479542 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.28□□□□□ -1.08
ABCF1-206ENST00000479542 IGKV2-29A2NJV5 120 aaPredicted RBP8.28□□□□□ -1.08
ABCF1-206ENST00000479542 TSHBP01222 138 aa8.28□□□□□ -1.08
ABCF1-206ENST00000479542 AMMECR1LQ6DCA0 310 aa8.28□□□□□ -1.08
ABCF1-206ENST00000479542 A0A096LNI7 61 aa8.27□□□□□ -1.09
ABCF1-206ENST00000479542 IGHV1-58A0A0C4DH39 117 aa8.27□□□□□ -1.09
ABCF1-206ENST00000479542 IGKV2-24A0A0C4DH68 120 aa8.27□□□□□ -1.09
ABCF1-206ENST00000479542 SMKR1H3BMG3 65 aa8.27□□□□□ -1.09
ABCF1-206ENST00000479542 FGF6P10767 208 aa8.27□□□□□ -1.09
ABCF1-206ENST00000479542 POLR2KP53803 58 aaKnown RBP8.27□□□□□ -1.09
ABCF1-206ENST00000479542 HIGD2BQ4VC39 106 aa8.27□□□□□ -1.09
ABCF1-206ENST00000479542 Q6ZRP5 223 aa8.27□□□□□ -1.09
ABCF1-206ENST00000479542 TRBV27A0A0K0K1C4 114 aa8.26□□□□□ -1.09
ABCF1-206ENST00000479542 ESDP10768 282 aa8.26□□□□□ -1.09
ABCF1-206ENST00000479542 RNASEKQ6P5S7 137 aaKnown RBP8.26□□□□□ -1.09
ABCF1-206ENST00000479542 TMEM242Q9NWH2 141 aa8.26□□□□□ -1.09
ABCF1-206ENST00000479542 CCL25O15444 150 aa8.25□□□□□ -1.09
ABCF1-206ENST00000479542 CAMPP49913 170 aa8.25□□□□□ -1.09
ABCF1-206ENST00000479542 RAB14P61106 215 aa8.25□□□□□ -1.09
ABCF1-206ENST00000479542 FAM104BQ5XKR9 115 aa8.25□□□□□ -1.09
ABCF1-206ENST00000479542 NRACQ8N912 160 aa8.25□□□□□ -1.09
ABCF1-206ENST00000479542 IGKV3OR2-268A0A0C4DH90 116 aa8.24□□□□□ -1.09
ABCF1-206ENST00000479542 LINC00959A0A1B0GUT2 108 aa8.24□□□□□ -1.09
ABCF1-206ENST00000479542 A0A1B0GW15 77 aa8.24□□□□□ -1.09
ABCF1-206ENST00000479542 MRPL51Q4U2R6 128 aaKnown RBP8.24□□□□□ -1.09
ABCF1-206ENST00000479542 CD164L2Q6UWJ8 174 aa8.24□□□□□ -1.09
ABCF1-206ENST00000479542 MRPL52Q86TS9 123 aaKnown RBP8.24□□□□□ -1.09
ABCF1-206ENST00000479542 BTF3L4Q96K17 158 aa8.24□□□□□ -1.09
ABCF1-206ENST00000479542 VCYO14598 125 aa8.23□□□□□ -1.09
ABCF1-206ENST00000479542 PPP1R17O96001 155 aa8.23□□□□□ -1.09
ABCF1-206ENST00000479542 SUMO2P61956 95 aaKnown RBP8.23□□□□□ -1.09
ABCF1-206ENST00000479542 MRPL54Q6P161 138 aaKnown RBP8.23□□□□□ -1.09
ABCF1-206ENST00000479542 TMEM101Q96IK0 257 aa8.23□□□□□ -1.09
ABCF1-206ENST00000479542 CARD19Q96LW7 228 aa8.23□□□□□ -1.09
ABCF1-206ENST00000479542 A0A1B0GXF2 115 aa8.22□□□□□ -1.09
ABCF1-206ENST00000479542 HBBP68871 147 aa8.22□□□□□ -1.09
ABCF1-206ENST00000479542 SS18Q15532 418 aa8.22□□□□□ -1.09
ABCF1-206ENST00000479542 CDC42SE2Q9NRR3 84 aa8.22□□□□□ -1.09
ABCF1-206ENST00000479542 C7orf77A4D0Y5 90 aa8.21□□□□□ -1.1
ABCF1-206ENST00000479542 LINC00862A6NCI5 91 aa8.21□□□□□ -1.1
ABCF1-206ENST00000479542 ZNF561-AS1K7EIQ3 104 aa8.21□□□□□ -1.1
ABCF1-206ENST00000479542 PPP1R2P9O14990 202 aa8.21□□□□□ -1.1
ABCF1-206ENST00000479542 S100A8P05109 93 aa8.21□□□□□ -1.1
ABCF1-206ENST00000479542 FCER1GP30273 86 aa8.21□□□□□ -1.1
ABCF1-206ENST00000479542 CKS2P33552 79 aa8.21□□□□□ -1.1
ABCF1-206ENST00000479542 PTTG1IPP53801 180 aa8.21□□□□□ -1.1
ABCF1-206ENST00000479542 SYCNQ0VAF6 134 aa8.21□□□□□ -1.1
ABCF1-206ENST00000479542 CLLU1Q5K131 121 aa8.21□□□□□ -1.1
ABCF1-206ENST00000479542 CSDC2Q9Y534 153 aaKnown RBP8.21□□□□□ -1.1
ABCF1-206ENST00000479542 TRBV24-1A0A075B6N3 115 aa8.2□□□□□ -1.1
ABCF1-206ENST00000479542 LOC107984640A0A0U1RRK4 108 aa8.2□□□□□ -1.1
ABCF1-206ENST00000479542 F8W036 122 aa8.2□□□□□ -1.1
ABCF1-206ENST00000479542 XCL1P47992 114 aa8.2□□□□□ -1.1
ABCF1-206ENST00000479542 PNRC1Q12796 327 aaPredicted RBP8.2□□□□□ -1.1
ABCF1-206ENST00000479542 C20orf78Q9BR46 151 aa8.2□□□□□ -1.1
ABCF1-206ENST00000479542 C1orf196B1AJZ1 125 aa8.19□□□□□ -1.1
ABCF1-206ENST00000479542 TNFRSF6BO95407 300 aa8.19□□□□□ -1.1
ABCF1-206ENST00000479542 IFITM2Q01629 132 aa8.19□□□□□ -1.1
ABCF1-206ENST00000479542 ATP5L2Q7Z4Y8 100 aa8.19□□□□□ -1.1
ABCF1-206ENST00000479542 KIR2DL4Q99706 377 aa8.19□□□□□ -1.1
ABCF1-206ENST00000479542 IGLV4-69A0A075B6H9 119 aa8.18□□□□□ -1.1
ABCF1-206ENST00000479542 D6R8Y8 96 aa8.18□□□□□ -1.1
ABCF1-206ENST00000479542 MT-ND4LP03901 98 aa8.18□□□□□ -1.1
ABCF1-206ENST00000479542 RPL32P62910 135 aaKnown RBP8.18□□□□□ -1.1
ABCF1-206ENST00000479542 SMAGPQ0VAQ4 97 aa8.18□□□□□ -1.1
ABCF1-206ENST00000479542 ZNF664Q8N3J9 261 aa8.18□□□□□ -1.1
ABCF1-206ENST00000479542 C2orf48Q96LS8 159 aa8.18□□□□□ -1.1
ABCF1-206ENST00000479542 NPYP01303 97 aa8.17□□□□□ -1.1
ABCF1-206ENST00000479542 RNF151Q2KHN1 245 aa8.17□□□□□ -1.1
ABCF1-206ENST00000479542 ANAPC16Q96DE5 110 aa8.17□□□□□ -1.1
ABCF1-206ENST00000479542 KRTAP3-3Q9BYR6 98 aa8.17□□□□□ -1.1
ABCF1-206ENST00000479542 KRTAP3-2Q9BYR7 98 aa8.17□□□□□ -1.1
ABCF1-206ENST00000479542 UBE2D4Q9Y2X8 147 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms