RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 C9JQL5 133 aa10.99□□□□□ -0.65
ECHDC1-216ENST00000479525 CFAP161Q6P656 301 aa10.99□□□□□ -0.65
ECHDC1-216ENST00000479525 TEX261Q6UWH6 196 aa10.99□□□□□ -0.65
ECHDC1-216ENST00000479525 OR5A1Q8NGJ0 315 aa10.99□□□□□ -0.65
ECHDC1-216ENST00000479525 BTF3L4Q96K17 158 aa10.99□□□□□ -0.65
ECHDC1-216ENST00000479525 TMEM191AQ9H0A3 160 aa10.99□□□□□ -0.65
ECHDC1-216ENST00000479525 OSTCQ9NRP0 149 aa10.99□□□□□ -0.65
ECHDC1-216ENST00000479525 NUP35Q8NFH5 326 aa10.98□□□□□ -0.65
ECHDC1-216ENST00000479525 MRAP2Q96G30 205 aa10.98□□□□□ -0.65
ECHDC1-216ENST00000479525 TMEM101Q96IK0 257 aa10.98□□□□□ -0.65
ECHDC1-216ENST00000479525 A0A096LNI7 61 aa10.97□□□□□ -0.65
ECHDC1-216ENST00000479525 POLR2KP53803 58 aaKnown RBP10.97□□□□□ -0.65
ECHDC1-216ENST00000479525 SRSF3P84103 164 aaKnown RBP10.97□□□□□ -0.65
ECHDC1-216ENST00000479525 ADIRFQ15847 76 aa10.97□□□□□ -0.65
ECHDC1-216ENST00000479525 ISOC2Q96AB3 205 aa10.97□□□□□ -0.65
ECHDC1-216ENST00000479525 GVQW2A0A096LPI5 108 aaPredicted RBP10.96□□□□□ -0.65
ECHDC1-216ENST00000479525 H7C423 109 aa10.96□□□□□ -0.65
ECHDC1-216ENST00000479525 NDUFS6O75380 124 aaKnown RBP10.96□□□□□ -0.65
ECHDC1-216ENST00000479525 RPL23P62829 140 aaKnown RBP10.96□□□□□ -0.65
ECHDC1-216ENST00000479525 MT1HL1P0DM35 61 aa10.95□□□□□ -0.66
ECHDC1-216ENST00000479525 ZNF25P17030 456 aaPredicted RBP10.95□□□□□ -0.66
ECHDC1-216ENST00000479525 STPG4Q8N801 248 aa10.95□□□□□ -0.66
ECHDC1-216ENST00000479525 PLAC8Q9NZF1 115 aa10.95□□□□□ -0.66
ECHDC1-216ENST00000479525 C7orf77A4D0Y5 90 aa10.94□□□□□ -0.66
ECHDC1-216ENST00000479525 ODF1Q14990 250 aa10.94□□□□□ -0.66
ECHDC1-216ENST00000479525 NRACQ8N912 160 aa10.94□□□□□ -0.66
ECHDC1-216ENST00000479525 CDC42SE2Q9NRR3 84 aa10.94□□□□□ -0.66
ECHDC1-216ENST00000479525 RIGQ13278 110 aa10.93□□□□□ -0.66
ECHDC1-216ENST00000479525 TRBV27A0A0K0K1C4 114 aa10.92□□□□□ -0.66
ECHDC1-216ENST00000479525 FCER1GP30273 86 aa10.92□□□□□ -0.66
ECHDC1-216ENST00000479525 CAMPP49913 170 aa10.92□□□□□ -0.66
ECHDC1-216ENST00000479525 SS18Q15532 418 aa10.92□□□□□ -0.66
ECHDC1-216ENST00000479525 TMEM241Q24JQ0 296 aa10.92□□□□□ -0.66
ECHDC1-216ENST00000479525 MRPL51Q4U2R6 128 aaKnown RBP10.92□□□□□ -0.66
ECHDC1-216ENST00000479525 SERTAD4-AS1Q5TG53 156 aa10.92□□□□□ -0.66
ECHDC1-216ENST00000479525 ZNF664Q8N3J9 261 aa10.92□□□□□ -0.66
ECHDC1-216ENST00000479525 PLA2G2DQ9UNK4 145 aa10.92□□□□□ -0.66
ECHDC1-216ENST00000479525 IGHV1-58A0A0C4DH39 117 aa10.91□□□□□ -0.66
ECHDC1-216ENST00000479525 Q6ZUT4 128 aa10.91□□□□□ -0.66
ECHDC1-216ENST00000479525 CARD19Q96LW7 228 aa10.91□□□□□ -0.66
ECHDC1-216ENST00000479525 MRPL52Q86TS9 123 aaKnown RBP10.9□□□□□ -0.66
ECHDC1-216ENST00000479525 C7orf33Q8WU49 177 aa10.9□□□□□ -0.66
ECHDC1-216ENST00000479525 TRAV13-1A0A0B4J241 112 aa10.9□□□□□ -0.67
ECHDC1-216ENST00000479525 SUMO2P61956 95 aaKnown RBP10.9□□□□□ -0.67
ECHDC1-216ENST00000479525 MRPL54Q6P161 138 aaKnown RBP10.9□□□□□ -0.67
ECHDC1-216ENST00000479525 NAT8BQ9UHF3 227 aa10.9□□□□□ -0.67
ECHDC1-216ENST00000479525 UBE2D4Q9Y2X8 147 aa10.9□□□□□ -0.67
ECHDC1-216ENST00000479525 TNXBP22105 4242 aa10.89□□□□□ -0.67
ECHDC1-216ENST00000479525 UBR4Q5T4S7 5183 aa10.89□□□□□ -0.67
ECHDC1-216ENST00000479525 VCYO14598 125 aa10.89□□□□□ -0.67
ECHDC1-216ENST00000479525 RPL39P62891 51 aaKnown RBP10.89□□□□□ -0.67
ECHDC1-216ENST00000479525 CD164L2Q6UWJ8 174 aa10.89□□□□□ -0.67
ECHDC1-216ENST00000479525 NAT8Q9UHE5 227 aa10.89□□□□□ -0.67
ECHDC1-216ENST00000479525 IGLV4-69A0A075B6H9 119 aa10.88□□□□□ -0.67
ECHDC1-216ENST00000479525 ZNF561-AS1K7EIQ3 104 aa10.88□□□□□ -0.67
ECHDC1-216ENST00000479525 FAM74A3Q4VXF1 159 aa10.88□□□□□ -0.67
ECHDC1-216ENST00000479525 FAM104BQ5XKR9 115 aa10.88□□□□□ -0.67
ECHDC1-216ENST00000479525 Q6ZRU5 148 aa10.88□□□□□ -0.67
ECHDC1-216ENST00000479525 C5orf38Q86SI9 138 aa10.88□□□□□ -0.67
ECHDC1-216ENST00000479525 PRR3P79522 188 aaKnown RBP10.87□□□□□ -0.67
ECHDC1-216ENST00000479525 SYCNQ0VAF6 134 aa10.87□□□□□ -0.67
ECHDC1-216ENST00000479525 GAGE2BQ13066 116 aa10.87□□□□□ -0.67
ECHDC1-216ENST00000479525 OPRPNQ99935 248 aaPredicted RBP10.87□□□□□ -0.67
ECHDC1-216ENST00000479525 SMIM27A0A1W2PRY6 76 aa10.86□□□□□ -0.67
ECHDC1-216ENST00000479525 MALP21145 153 aa10.86□□□□□ -0.67
ECHDC1-216ENST00000479525 A0A0J9YXV3 536 aa10.85□□□□□ -0.67
ECHDC1-216ENST00000479525 CKS2P33552 79 aa10.85□□□□□ -0.67
ECHDC1-216ENST00000479525 KIR2DL4Q99706 377 aa10.85□□□□□ -0.67
ECHDC1-216ENST00000479525 D6R8Y8 96 aa10.84□□□□□ -0.67
ECHDC1-216ENST00000479525 COX7A2LO14548 114 aa10.84□□□□□ -0.67
ECHDC1-216ENST00000479525 NPYP01303 97 aa10.84□□□□□ -0.67
ECHDC1-216ENST00000479525 TCAPO15273 167 aa10.83□□□□□ -0.68
ECHDC1-216ENST00000479525 TNFRSF6BO95407 300 aa10.83□□□□□ -0.68
ECHDC1-216ENST00000479525 PEA15Q15121 130 aa10.83□□□□□ -0.68
ECHDC1-216ENST00000479525 C1orf196B1AJZ1 125 aa10.82□□□□□ -0.68
ECHDC1-216ENST00000479525 FAM104AQ969W3 186 aa10.82□□□□□ -0.68
ECHDC1-216ENST00000479525 CAMK2N2Q96S95 79 aa10.82□□□□□ -0.68
ECHDC1-216ENST00000479525 A0A1W2PNN7 141 aa10.81□□□□□ -0.68
ECHDC1-216ENST00000479525 PPP1R2P9O14990 202 aa10.81□□□□□ -0.68
ECHDC1-216ENST00000479525 PTTG1IPP53801 180 aa10.81□□□□□ -0.68
ECHDC1-216ENST00000479525 RPL18AQ02543 176 aaKnown RBP10.8□□□□□ -0.68
ECHDC1-216ENST00000479525 SMIM2Q9BVW6 85 aa10.8□□□□□ -0.68
ECHDC1-216ENST00000479525 LOC107984640A0A0U1RRK4 108 aa10.79□□□□□ -0.68
ECHDC1-216ENST00000479525 A0A1B0GXF2 115 aa10.79□□□□□ -0.68
ECHDC1-216ENST00000479525 PPP1R17O96001 155 aa10.79□□□□□ -0.68
ECHDC1-216ENST00000479525 HBBP68871 147 aa10.79□□□□□ -0.68
ECHDC1-216ENST00000479525 SPAG11BQ08648 103 aa10.79□□□□□ -0.68
ECHDC1-216ENST00000479525 CSDC2Q9Y534 153 aaKnown RBP10.79□□□□□ -0.68
ECHDC1-216ENST00000479525 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.78□□□□□ -0.68
ECHDC1-216ENST00000479525 TRBV24-1A0A075B6N3 115 aa10.77□□□□□ -0.68
ECHDC1-216ENST00000479525 LINC00862A6NCI5 91 aa10.77□□□□□ -0.68
ECHDC1-216ENST00000479525 TMEM18Q96B42 140 aa10.77□□□□□ -0.68
ECHDC1-216ENST00000479525 C20orf78Q9BR46 151 aa10.77□□□□□ -0.68
ECHDC1-216ENST00000479525 ORAOV1Q8WV07 137 aa10.77□□□□□ -0.69
ECHDC1-216ENST00000479525 TIMM21Q9BVV7 248 aa10.77□□□□□ -0.69
ECHDC1-216ENST00000479525 LINC00474Q9P2X8 69 aa10.77□□□□□ -0.69
ECHDC1-216ENST00000479525 LOC389332A0A1B0GUA5 103 aa10.76□□□□□ -0.69
ECHDC1-216ENST00000479525 SMAGPQ0VAQ4 97 aa10.76□□□□□ -0.69
ECHDC1-216ENST00000479525 C9orf116Q5BN46 136 aaPredicted RBP10.76□□□□□ -0.69
ECHDC1-216ENST00000479525 C10orf25Q5T742 122 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms