RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 UBE2L6O14933 153 aa8.85□□□□□ -0.99
CHD3-210ENST00000479080 SIVA1O15304 175 aa8.85□□□□□ -0.99
CHD3-210ENST00000479080 SPATA12Q7Z6I5 190 aa8.85□□□□□ -0.99
CHD3-210ENST00000479080 UBE2DNLQ8IWF7 75 aa8.85□□□□□ -0.99
CHD3-210ENST00000479080 TIMM17AQ99595 171 aa8.85□□□□□ -0.99
CHD3-210ENST00000479080 HIST1H2BLQ99880 126 aa8.85□□□□□ -0.99
CHD3-210ENST00000479080 Q9H8V8 135 aa8.85□□□□□ -0.99
CHD3-210ENST00000479080 CDC42SE2Q9NRR3 84 aa8.85□□□□□ -0.99
CHD3-210ENST00000479080 SPANXA1Q9NS26 97 aa8.85□□□□□ -0.99
CHD3-210ENST00000479080 CSDC2Q9Y534 153 aaKnown RBP8.85□□□□□ -0.99
CHD3-210ENST00000479080 DNAH17Q9UFH2 4485 aa8.84□□□□□ -0.99
CHD3-210ENST00000479080 TMEM262E9PQX1 116 aa8.84□□□□□ -0.99
CHD3-210ENST00000479080 S100A6P06703 90 aa8.84□□□□□ -0.99
CHD3-210ENST00000479080 FABP4P15090 132 aa8.84□□□□□ -0.99
CHD3-210ENST00000479080 MRPS36P82909 103 aaKnown RBP8.84□□□□□ -0.99
CHD3-210ENST00000479080 ERASQ7Z444 233 aa8.84□□□□□ -0.99
CHD3-210ENST00000479080 SCGB3A1Q96QR1 104 aa8.84□□□□□ -0.99
CHD3-210ENST00000479080 ZNF25P17030 456 aaPredicted RBP8.83□□□□□ -1
CHD3-210ENST00000479080 AMMECR1LQ6DCA0 310 aa8.83□□□□□ -1
CHD3-210ENST00000479080 BAALCQ8WXS3 180 aa8.83□□□□□ -1
CHD3-210ENST00000479080 TMEM18Q96B42 140 aa8.83□□□□□ -1
CHD3-210ENST00000479080 AMELXQ99217 191 aa8.83□□□□□ -1
CHD3-210ENST00000479080 LEPROTL1O95214 131 aa8.82□□□□□ -1
CHD3-210ENST00000479080 CLPSL2Q6UWE3 100 aa8.82□□□□□ -1
CHD3-210ENST00000479080 ENHOQ6UWT2 76 aa8.82□□□□□ -1
CHD3-210ENST00000479080 OR5A1Q8NGJ0 315 aa8.82□□□□□ -1
CHD3-210ENST00000479080 PACRGQ96M98 296 aaPredicted RBP8.82□□□□□ -1
CHD3-210ENST00000479080 PRR34Q9NV39 138 aa8.82□□□□□ -1
CHD3-210ENST00000479080 KLK12Q9UKR0 248 aa8.82□□□□□ -1
CHD3-210ENST00000479080 A0A087WX48 190 aa8.81□□□□□ -1
CHD3-210ENST00000479080 LINC00269Q8N2A0 174 aa8.81□□□□□ -1
CHD3-210ENST00000479080 ZNF664Q8N3J9 261 aa8.81□□□□□ -1
CHD3-210ENST00000479080 IFI27L1Q96BM0 104 aa8.81□□□□□ -1
CHD3-210ENST00000479080 TMEM141Q96I45 108 aa8.81□□□□□ -1
CHD3-210ENST00000479080 LY6G6CO95867 125 aa8.8□□□□□ -1
CHD3-210ENST00000479080 ANGP03950 147 aaKnown RBP8.8□□□□□ -1
CHD3-210ENST00000479080 NPSP0C0P6 89 aa8.8□□□□□ -1
CHD3-210ENST00000479080 G0S2P27469 103 aa8.8□□□□□ -1
CHD3-210ENST00000479080 PKIAP61925 76 aa8.8□□□□□ -1
CHD3-210ENST00000479080 NBDYA0A0U1RRE5 68 aa8.79□□□□□ -1
CHD3-210ENST00000479080 LINC01549A6NIU2 74 aa8.79□□□□□ -1
CHD3-210ENST00000479080 IBA57-AS1B1ANH7 110 aa8.79□□□□□ -1
CHD3-210ENST00000479080 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.79□□□□□ -1
CHD3-210ENST00000479080 ATP5LO75964 103 aa8.79□□□□□ -1
CHD3-210ENST00000479080 C3orf79P0CE67 100 aa8.79□□□□□ -1
CHD3-210ENST00000479080 KRTAP26-1Q6PEX3 210 aa8.79□□□□□ -1
CHD3-210ENST00000479080 Q6ZR54 194 aa8.79□□□□□ -1
CHD3-210ENST00000479080 TMEM101Q96IK0 257 aa8.79□□□□□ -1
CHD3-210ENST00000479080 LINC00959A0A1B0GUT2 108 aa8.78□□□□□ -1
CHD3-210ENST00000479080 PRSS29PA6NIE9 313 aa8.78□□□□□ -1
CHD3-210ENST00000479080 UBE2D1P51668 147 aa8.78□□□□□ -1
CHD3-210ENST00000479080 REG3AQ06141 175 aa8.78□□□□□ -1
CHD3-210ENST00000479080 DGAT2L7PQ6IED9 249 aa8.78□□□□□ -1
CHD3-210ENST00000479080 KRTAP17-1Q9BYP8 105 aa8.78□□□□□ -1
CHD3-210ENST00000479080 CST9LQ9H4G1 147 aa8.78□□□□□ -1
CHD3-210ENST00000479080 FRAS1Q86XX4 4008 aa8.77□□□□□ -1
CHD3-210ENST00000479080 IGLV4-69A0A075B6H9 119 aa8.77□□□□□ -1.01
CHD3-210ENST00000479080 IGKV3OR2-268A0A0C4DH90 116 aa8.77□□□□□ -1.01
CHD3-210ENST00000479080 LCE6AA0A183 80 aa8.77□□□□□ -1.01
CHD3-210ENST00000479080 ODF1Q14990 250 aa8.77□□□□□ -1.01
CHD3-210ENST00000479080 UBE2WQ96B02 151 aa8.77□□□□□ -1.01
CHD3-210ENST00000479080 HSPB8Q9UJY1 196 aa8.77□□□□□ -1.01
CHD3-210ENST00000479080 DNAH11Q96DT5 4516 aa8.77□□□□□ -1.01
CHD3-210ENST00000479080 FAT2Q9NYQ8 4349 aa8.76□□□□□ -1.01
CHD3-210ENST00000479080 TRAV12-1A0A0B4J245 112 aa8.76□□□□□ -1.01
CHD3-210ENST00000479080 SYS1-DBNDD2H3BUS1 97 aa8.76□□□□□ -1.01
CHD3-210ENST00000479080 S100A2P29034 98 aa8.76□□□□□ -1.01
CHD3-210ENST00000479080 SMAGPQ0VAQ4 97 aa8.76□□□□□ -1.01
CHD3-210ENST00000479080 PMVKQ15126 192 aa8.76□□□□□ -1.01
CHD3-210ENST00000479080 Q6ZN92 141 aa8.76□□□□□ -1.01
CHD3-210ENST00000479080 TEX43Q6ZNM6 134 aa8.76□□□□□ -1.01
CHD3-210ENST00000479080 FAM19A3Q7Z5A8 133 aa8.76□□□□□ -1.01
CHD3-210ENST00000479080 VCX2Q9H322 139 aa8.76□□□□□ -1.01
CHD3-210ENST00000479080 TRAV13-1A0A0B4J241 112 aa8.75□□□□□ -1.01
CHD3-210ENST00000479080 A0A0J9YXV3 536 aa8.75□□□□□ -1.01
CHD3-210ENST00000479080 M0R2N4 97 aa8.75□□□□□ -1.01
CHD3-210ENST00000479080 COX6A2Q02221 97 aa8.75□□□□□ -1.01
CHD3-210ENST00000479080 LINC00242Q5T6M2 205 aa8.75□□□□□ -1.01
CHD3-210ENST00000479080 OR10D4PQ8NGN7 298 aa8.75□□□□□ -1.01
CHD3-210ENST00000479080 PMCHL2Q9BQD1 86 aa8.75□□□□□ -1.01
CHD3-210ENST00000479080 IGLV10-54A0A075B6I4 117 aa8.74□□□□□ -1.01
CHD3-210ENST00000479080 H0Y8G0 127 aa8.74□□□□□ -1.01
CHD3-210ENST00000479080 PRSS1P07477 247 aa8.74□□□□□ -1.01
CHD3-210ENST00000479080 KRTDAPP60985 99 aa8.74□□□□□ -1.01
CHD3-210ENST00000479080 Q6ZRN7 208 aaPredicted RBP8.74□□□□□ -1.01
CHD3-210ENST00000479080 Q9HAA7 133 aa8.74□□□□□ -1.01
CHD3-210ENST00000479080 MRPL35Q9NZE8 188 aaKnown RBP8.74□□□□□ -1.01
CHD3-210ENST00000479080 LOC105371267A0A1B0GV96 52 aa8.73□□□□□ -1.01
CHD3-210ENST00000479080 CCL25O15444 150 aa8.73□□□□□ -1.01
CHD3-210ENST00000479080 IGLC3P0DOY3 106 aa8.73□□□□□ -1.01
CHD3-210ENST00000479080 LINC01545Q5VT33 79 aa8.73□□□□□ -1.01
CHD3-210ENST00000479080 C10orf126Q8N4M7 172 aa8.73□□□□□ -1.01
CHD3-210ENST00000479080 MAPKAPK5-AS1Q8N8E1 139 aa8.73□□□□□ -1.01
CHD3-210ENST00000479080 CHCHD10Q8WYQ3 142 aaPredicted RBP8.73□□□□□ -1.01
CHD3-210ENST00000479080 MAP1LC3CQ9BXW4 147 aa8.73□□□□□ -1.01
CHD3-210ENST00000479080 C11orf86A6NJI1 115 aa8.72□□□□□ -1.01
CHD3-210ENST00000479080 CRPP02741 224 aa8.72□□□□□ -1.01
CHD3-210ENST00000479080 FOXI1Q12951 378 aa8.72□□□□□ -1.01
CHD3-210ENST00000479080 MIAQ16674 131 aa8.72□□□□□ -1.01
CHD3-210ENST00000479080 TTC32Q5I0X7 151 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms