RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-222ENST00000477937 PPP1R2P9O14990 202 aa8.87□□□□□ -0.99
HDAC7-222ENST00000477937 MRPL51Q4U2R6 128 aaKnown RBP8.87□□□□□ -0.99
HDAC7-222ENST00000477937 MRPL52Q86TS9 123 aaKnown RBP8.87□□□□□ -0.99
HDAC7-222ENST00000477937 C15orf56Q8N910 161 aa8.87□□□□□ -0.99
HDAC7-222ENST00000477937 NRACQ8N912 160 aa8.87□□□□□ -0.99
HDAC7-222ENST00000477937 LINC00959A0A1B0GUT2 108 aa8.86□□□□□ -0.99
HDAC7-222ENST00000477937 SLPIP03973 132 aa8.86□□□□□ -0.99
HDAC7-222ENST00000477937 S100A8P05109 93 aa8.86□□□□□ -0.99
HDAC7-222ENST00000477937 SMAGPQ0VAQ4 97 aa8.86□□□□□ -0.99
HDAC7-222ENST00000477937 SS18Q15532 418 aa8.86□□□□□ -0.99
HDAC7-222ENST00000477937 CDC42SE2Q9NRR3 84 aa8.86□□□□□ -0.99
HDAC7-222ENST00000477937 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.86□□□□□ -0.99
HDAC7-222ENST00000477937 F8W036 122 aa8.85□□□□□ -0.99
HDAC7-222ENST00000477937 CKS2P33552 79 aa8.85□□□□□ -0.99
HDAC7-222ENST00000477937 XCL1P47992 114 aa8.85□□□□□ -0.99
HDAC7-222ENST00000477937 FOXI1Q12951 378 aa8.85□□□□□ -0.99
HDAC7-222ENST00000477937 HIGD2BQ4VC39 106 aa8.85□□□□□ -0.99
HDAC7-222ENST00000477937 ZNF664Q8N3J9 261 aa8.85□□□□□ -0.99
HDAC7-222ENST00000477937 DPH3Q96FX2 82 aa8.85□□□□□ -0.99
HDAC7-222ENST00000477937 CCL25O15444 150 aa8.84□□□□□ -0.99
HDAC7-222ENST00000477937 RAB14P61106 215 aa8.84□□□□□ -0.99
HDAC7-222ENST00000477937 HBBP68871 147 aa8.84□□□□□ -0.99
HDAC7-222ENST00000477937 MRPL54Q6P161 138 aaKnown RBP8.84□□□□□ -0.99
HDAC7-222ENST00000477937 C20orf78Q9BR46 151 aa8.84□□□□□ -0.99
HDAC7-222ENST00000477937 TRBV24-1A0A075B6N3 115 aa8.83□□□□□ -1
HDAC7-222ENST00000477937 PANO1I0J062 215 aa8.83□□□□□ -1
HDAC7-222ENST00000477937 KRTAP10-4P60372 401 aaPredicted RBP8.83□□□□□ -1
HDAC7-222ENST00000477937 CIRBPQ14011 172 aaKnown RBP8.83□□□□□ -1
HDAC7-222ENST00000477937 TMEM18Q96B42 140 aa8.83□□□□□ -1
HDAC7-222ENST00000477937 CSDC2Q9Y534 153 aaKnown RBP8.83□□□□□ -1
HDAC7-222ENST00000477937 GVQW2A0A096LPI5 108 aaPredicted RBP8.82□□□□□ -1
HDAC7-222ENST00000477937 J3QL48 77 aa8.82□□□□□ -1
HDAC7-222ENST00000477937 TCAPO15273 167 aa8.82□□□□□ -1
HDAC7-222ENST00000477937 TNFRSF6BO95407 300 aa8.82□□□□□ -1
HDAC7-222ENST00000477937 RPL37AP61513 92 aaKnown RBP8.82□□□□□ -1
HDAC7-222ENST00000477937 RPL32P62910 135 aaKnown RBP8.82□□□□□ -1
HDAC7-222ENST00000477937 UBE2D4Q9Y2X8 147 aa8.82□□□□□ -1
HDAC7-222ENST00000477937 IGHV1-58A0A0C4DH39 117 aa8.81□□□□□ -1
HDAC7-222ENST00000477937 A0A1B0GXF2 115 aa8.81□□□□□ -1
HDAC7-222ENST00000477937 C1orf196B1AJZ1 125 aa8.81□□□□□ -1
HDAC7-222ENST00000477937 D6R8Y8 96 aa8.81□□□□□ -1
HDAC7-222ENST00000477937 PPBPP02775 128 aa8.81□□□□□ -1
HDAC7-222ENST00000477937 CD164L2Q6UWJ8 174 aa8.81□□□□□ -1
HDAC7-222ENST00000477937 KRTAP29-1A8MX34 341 aaPredicted RBP8.8□□□□□ -1
HDAC7-222ENST00000477937 COX6A2Q02221 97 aa8.8□□□□□ -1
HDAC7-222ENST00000477937 PNRC1Q12796 327 aaPredicted RBP8.8□□□□□ -1
HDAC7-222ENST00000477937 ATP5L2Q7Z4Y8 100 aa8.8□□□□□ -1
HDAC7-222ENST00000477937 TIMM21Q9BVV7 248 aa8.8□□□□□ -1
HDAC7-222ENST00000477937 SMIM2Q9BVW6 85 aa8.8□□□□□ -1
HDAC7-222ENST00000477937 DMBT1Q9UGM3 2413 aaPredicted RBP8.8□□□□□ -1
HDAC7-222ENST00000477937 A0A087WYN8 130 aa8.79□□□□□ -1
HDAC7-222ENST00000477937 PHOX2AO14813 284 aa8.79□□□□□ -1
HDAC7-222ENST00000477937 CHTF8P0CG12 524 aa8.79□□□□□ -1
HDAC7-222ENST00000477937 SPACA4Q8TDM5 124 aa8.79□□□□□ -1
HDAC7-222ENST00000477937 ZNF561-AS1K7EIQ3 104 aa8.78□□□□□ -1
HDAC7-222ENST00000477937 MT-ND4LP03901 98 aa8.78□□□□□ -1
HDAC7-222ENST00000477937 RNASE13Q5GAN3 156 aaKnown RBP8.78□□□□□ -1
HDAC7-222ENST00000477937 ORMDL3Q8N138 153 aa8.78□□□□□ -1
HDAC7-222ENST00000477937 PRSS3P2Q8NHM4 247 aa8.78□□□□□ -1
HDAC7-222ENST00000477937 ANAPC16Q96DE5 110 aa8.78□□□□□ -1
HDAC7-222ENST00000477937 TRAV13-1A0A0B4J241 112 aa8.77□□□□□ -1.01
HDAC7-222ENST00000477937 NPYP01303 97 aa8.77□□□□□ -1.01
HDAC7-222ENST00000477937 MALP21145 153 aa8.77□□□□□ -1.01
HDAC7-222ENST00000477937 TMEM136Q6ZRR5 245 aa8.77□□□□□ -1.01
HDAC7-222ENST00000477937 Q6ZUT4 128 aa8.77□□□□□ -1.01
HDAC7-222ENST00000477937 PKIGQ9Y2B9 76 aa8.77□□□□□ -1.01
HDAC7-222ENST00000477937 IGKV2-24A0A0C4DH68 120 aa8.76□□□□□ -1.01
HDAC7-222ENST00000477937 COX7A2LO14548 114 aa8.76□□□□□ -1.01
HDAC7-222ENST00000477937 RPL39P62891 51 aaKnown RBP8.76□□□□□ -1.01
HDAC7-222ENST00000477937 MAJINQ3KP22 176 aa8.76□□□□□ -1.01
HDAC7-222ENST00000477937 LINC00526Q96FQ7 95 aa8.76□□□□□ -1.01
HDAC7-222ENST00000477937 PRELID3AQ96N28 172 aa8.76□□□□□ -1.01
HDAC7-222ENST00000477937 SPANXA1Q9NS26 97 aa8.76□□□□□ -1.01
HDAC7-222ENST00000477937 PLAC8Q9NZF1 115 aa8.76□□□□□ -1.01
HDAC7-222ENST00000477937 RAB5AP20339 215 aa8.75□□□□□ -1.01
HDAC7-222ENST00000477937 SYCNQ0VAF6 134 aa8.75□□□□□ -1.01
HDAC7-222ENST00000477937 CLLU1Q5K131 121 aa8.75□□□□□ -1.01
HDAC7-222ENST00000477937 CARD19Q96LW7 228 aa8.75□□□□□ -1.01
HDAC7-222ENST00000477937 MYCBP2O75592 4640 aa8.75□□□□□ -1.01
HDAC7-222ENST00000477937 OXTP01178 125 aa8.74□□□□□ -1.01
HDAC7-222ENST00000477937 LINC00474Q9P2X8 69 aa8.74□□□□□ -1.01
HDAC7-222ENST00000477937 LAMTOR2Q9Y2Q5 125 aa8.74□□□□□ -1.01
HDAC7-222ENST00000477937 A0A096LNI7 61 aa8.73□□□□□ -1.01
HDAC7-222ENST00000477937 APOMO95445 188 aa8.73□□□□□ -1.01
HDAC7-222ENST00000477937 MRPS36P82909 103 aaKnown RBP8.73□□□□□ -1.01
HDAC7-222ENST00000477937 C5orf38Q86SI9 138 aa8.73□□□□□ -1.01
HDAC7-222ENST00000477937 STPG4Q8N801 248 aa8.73□□□□□ -1.01
HDAC7-222ENST00000477937 C7orf33Q8WU49 177 aa8.73□□□□□ -1.01
HDAC7-222ENST00000477937 IGLV4-69A0A075B6H9 119 aa8.72□□□□□ -1.01
HDAC7-222ENST00000477937 PRSS47A8MTI9 375 aa8.72□□□□□ -1.01
HDAC7-222ENST00000477937 OPRPNQ99935 248 aaPredicted RBP8.72□□□□□ -1.01
HDAC7-222ENST00000477937 IFI27P40305 119 aaPredicted RBP8.71□□□□□ -1.02
HDAC7-222ENST00000477937 HNRNPA3P51991 378 aaKnown RBP8.71□□□□□ -1.02
HDAC7-222ENST00000477937 FAM104AQ969W3 186 aa8.71□□□□□ -1.02
HDAC7-222ENST00000477937 CAMK2N2Q96S95 79 aa8.71□□□□□ -1.02
HDAC7-222ENST00000477937 MAP1LC3AQ9H492 121 aa8.71□□□□□ -1.02
HDAC7-222ENST00000477937 LOC389332A0A1B0GUA5 103 aa8.7□□□□□ -1.02
HDAC7-222ENST00000477937 IFITM10A6NMD0 228 aa8.7□□□□□ -1.02
HDAC7-222ENST00000477937 UQCC3Q6UW78 93 aa8.7□□□□□ -1.02
HDAC7-222ENST00000477937 C2orf48Q96LS8 159 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms