RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 TRAV1-1A0A0B4J248 108 aa12.13□□□□□ -0.47
PDLIM1-202ENST00000477757 MALP21145 153 aa12.12□□□□□ -0.47
PDLIM1-202ENST00000477757 TWIST1Q15672 202 aa12.12□□□□□ -0.47
PDLIM1-202ENST00000477757 KRTAP11-1Q8IUC1 163 aa12.12□□□□□ -0.47
PDLIM1-202ENST00000477757 TSKUQ8WUA8 353 aa12.12□□□□□ -0.47
PDLIM1-202ENST00000477757 SMIM12Q96EX1 92 aa12.12□□□□□ -0.47
PDLIM1-202ENST00000477757 C2orf48Q96LS8 159 aa12.12□□□□□ -0.47
PDLIM1-202ENST00000477757 A0A087WZ39 114 aa12.11□□□□□ -0.47
PDLIM1-202ENST00000477757 BCL2L11O43521 198 aa12.11□□□□□ -0.47
PDLIM1-202ENST00000477757 ESDP10768 282 aa12.11□□□□□ -0.47
PDLIM1-202ENST00000477757 MRPL52Q86TS9 123 aaKnown RBP12.11□□□□□ -0.47
PDLIM1-202ENST00000477757 CDC42SE2Q9NRR3 84 aa12.11□□□□□ -0.47
PDLIM1-202ENST00000477757 UMAD1C9J7I0 102 aa12.1□□□□□ -0.47
PDLIM1-202ENST00000477757 I3L3M4 83 aa12.1□□□□□ -0.47
PDLIM1-202ENST00000477757 COX7A2LO14548 114 aa12.1□□□□□ -0.47
PDLIM1-202ENST00000477757 MRAP2Q96G30 205 aa12.1□□□□□ -0.47
PDLIM1-202ENST00000477757 G3V3Q6 166 aa12.09□□□□□ -0.47
PDLIM1-202ENST00000477757 GNG4P50150 75 aa12.09□□□□□ -0.47
PDLIM1-202ENST00000477757 TEX261Q6UWH6 196 aa12.09□□□□□ -0.47
PDLIM1-202ENST00000477757 ARPC5O15511 151 aa12.08□□□□□ -0.48
PDLIM1-202ENST00000477757 TSHBP01222 138 aa12.08□□□□□ -0.48
PDLIM1-202ENST00000477757 PMCHP20382 165 aa12.08□□□□□ -0.48
PDLIM1-202ENST00000477757 OPRPNQ99935 248 aaPredicted RBP12.08□□□□□ -0.48
PDLIM1-202ENST00000477757 CCL20P78556 96 aa12.07□□□□□ -0.48
PDLIM1-202ENST00000477757 RNF151Q2KHN1 245 aa12.07□□□□□ -0.48
PDLIM1-202ENST00000477757 MANBALQ9NQG1 85 aa12.07□□□□□ -0.48
PDLIM1-202ENST00000477757 TRBV6-5A0A0K0K1A5 114 aa12.06□□□□□ -0.48
PDLIM1-202ENST00000477757 RAB19A4D1S5 217 aa12.06□□□□□ -0.48
PDLIM1-202ENST00000477757 C1orf196B1AJZ1 125 aa12.06□□□□□ -0.48
PDLIM1-202ENST00000477757 H2AFB1P0C5Y9 115 aa12.06□□□□□ -0.48
PDLIM1-202ENST00000477757 FAM210AQ96ND0 272 aa12.06□□□□□ -0.48
PDLIM1-202ENST00000477757 TMEM242Q9NWH2 141 aa12.06□□□□□ -0.48
PDLIM1-202ENST00000477757 TRBV20OR9-2A0A075B6H5 130 aa12.05□□□□□ -0.48
PDLIM1-202ENST00000477757 FAM168BA1KXE4 195 aa12.05□□□□□ -0.48
PDLIM1-202ENST00000477757 BIN3Q9NQY0 253 aa12.05□□□□□ -0.48
PDLIM1-202ENST00000477757 CARHSP1Q9Y2V2 147 aaKnown RBP12.05□□□□□ -0.48
PDLIM1-202ENST00000477757 FOXA3P55318 350 aaPredicted RBP12.04□□□□□ -0.48
PDLIM1-202ENST00000477757 SPAG11BQ08648 103 aa12.04□□□□□ -0.48
PDLIM1-202ENST00000477757 SMIM15Q7Z3B0 74 aa12.04□□□□□ -0.48
PDLIM1-202ENST00000477757 GNG13Q9P2W3 67 aa12.04□□□□□ -0.48
PDLIM1-202ENST00000477757 FAM19A5Q7Z5A7 132 aaPredicted RBP12.02□□□□□ -0.49
PDLIM1-202ENST00000477757 NUDT10Q8NFP7 164 aa12.02□□□□□ -0.49
PDLIM1-202ENST00000477757 NUDT11Q96G61 164 aa12.02□□□□□ -0.49
PDLIM1-202ENST00000477757 MRPL35Q9NZE8 188 aaKnown RBP12.02□□□□□ -0.49
PDLIM1-202ENST00000477757 MUC17Q685J3 4493 aa12.01□□□□□ -0.49
PDLIM1-202ENST00000477757 C7orf77A4D0Y5 90 aa12.01□□□□□ -0.49
PDLIM1-202ENST00000477757 RNASE7Q9H1E1 156 aaKnown RBP12.01□□□□□ -0.49
PDLIM1-202ENST00000477757 RPP21Q9H633 154 aaKnown RBP12.01□□□□□ -0.49
PDLIM1-202ENST00000477757 TSPAN13O95857 204 aa12□□□□□ -0.49
PDLIM1-202ENST00000477757 C5orf38Q86SI9 138 aa12□□□□□ -0.49
PDLIM1-202ENST00000477757 OR10D4PQ8NGN7 298 aa12□□□□□ -0.49
PDLIM1-202ENST00000477757 IMMP2LQ96T52 175 aa12□□□□□ -0.49
PDLIM1-202ENST00000477757 ST20Q9HBF5 79 aa12□□□□□ -0.49
PDLIM1-202ENST00000477757 TRBV27A0A0K0K1C4 114 aa11.98□□□□□ -0.49
PDLIM1-202ENST00000477757 TLX1NBP0CAT3 122 aa11.98□□□□□ -0.49
PDLIM1-202ENST00000477757 ZNF345Q14585 488 aa11.98□□□□□ -0.49
PDLIM1-202ENST00000477757 KRTAP7-1Q8IUC3 87 aa11.98□□□□□ -0.49
PDLIM1-202ENST00000477757 CSDC2Q9Y534 153 aaKnown RBP11.98□□□□□ -0.49
PDLIM1-202ENST00000477757 TRAV13-1A0A0B4J241 112 aa11.97□□□□□ -0.49
PDLIM1-202ENST00000477757 F8WDY8 70 aa11.97□□□□□ -0.49
PDLIM1-202ENST00000477757 M0QXV9 152 aa11.97□□□□□ -0.49
PDLIM1-202ENST00000477757 PDE6DO43924 150 aa11.97□□□□□ -0.49
PDLIM1-202ENST00000477757 UBE2BP63146 152 aa11.97□□□□□ -0.49
PDLIM1-202ENST00000477757 RNASE13Q5GAN3 156 aaKnown RBP11.97□□□□□ -0.49
PDLIM1-202ENST00000477757 POLR2KP53803 58 aaKnown RBP11.96□□□□□ -0.49
PDLIM1-202ENST00000477757 NDUFA1O15239 70 aa11.95□□□□□ -0.5
PDLIM1-202ENST00000477757 MED9Q9NWA0 146 aa11.95□□□□□ -0.5
PDLIM1-202ENST00000477757 UBE2D4Q9Y2X8 147 aa11.95□□□□□ -0.5
PDLIM1-202ENST00000477757 FSIP2Q5CZC0 6907 aa11.95□□□□□ -0.5
PDLIM1-202ENST00000477757 C10orf25Q5T742 122 aa11.94□□□□□ -0.5
PDLIM1-202ENST00000477757 ORAOV1Q8WV07 137 aa11.94□□□□□ -0.5
PDLIM1-202ENST00000477757 SMDT1Q9H4I9 107 aa11.94□□□□□ -0.5
PDLIM1-202ENST00000477757 SMAGPQ0VAQ4 97 aa11.93□□□□□ -0.5
PDLIM1-202ENST00000477757 K7EN84 100 aa11.92□□□□□ -0.5
PDLIM1-202ENST00000477757 Q6ZUT4 128 aa11.92□□□□□ -0.5
PDLIM1-202ENST00000477757 C6orf48Q9UBA6 75 aa11.92□□□□□ -0.5
PDLIM1-202ENST00000477757 ZNF861PO60384 105 aa11.91□□□□□ -0.5
PDLIM1-202ENST00000477757 TMEM241Q24JQ0 296 aa11.91□□□□□ -0.5
PDLIM1-202ENST00000477757 GAGE2EQ4V326 116 aa11.91□□□□□ -0.5
PDLIM1-202ENST00000477757 GAGE2DQ9UEU5 116 aa11.91□□□□□ -0.5
PDLIM1-202ENST00000477757 SMLR1H3BR10 107 aa11.9□□□□□ -0.5
PDLIM1-202ENST00000477757 FCER1GP30273 86 aa11.9□□□□□ -0.5
PDLIM1-202ENST00000477757 UNQ6190/PRO20217Q6UXQ8 127 aa11.9□□□□□ -0.5
PDLIM1-202ENST00000477757 KANTRA0A1W2PQU2 76 aa11.89□□□□□ -0.51
PDLIM1-202ENST00000477757 A0A087X002 238 aa11.88□□□□□ -0.51
PDLIM1-202ENST00000477757 TIMM21Q9BVV7 248 aa11.88□□□□□ -0.51
PDLIM1-202ENST00000477757 IGHV3OR16-9A0A0B4J2B5 98 aa11.87□□□□□ -0.51
PDLIM1-202ENST00000477757 TEX46H3BTG2 121 aa11.87□□□□□ -0.51
PDLIM1-202ENST00000477757 LCE2DQ5TA82 110 aaPredicted RBP11.87□□□□□ -0.51
PDLIM1-202ENST00000477757 VCYO14598 125 aa11.86□□□□□ -0.51
PDLIM1-202ENST00000477757 TPRXLQ17RH7 258 aa11.86□□□□□ -0.51
PDLIM1-202ENST00000477757 OCC1Q8TAD7 63 aa11.86□□□□□ -0.51
PDLIM1-202ENST00000477757 TMEM191AQ9H0A3 160 aa11.86□□□□□ -0.51
PDLIM1-202ENST00000477757 CDIP1Q9H305 208 aa11.85□□□□□ -0.51
PDLIM1-202ENST00000477757 A8MWL6 223 aa11.84□□□□□ -0.51
PDLIM1-202ENST00000477757 RAB4AP20338 218 aa11.84□□□□□ -0.51
PDLIM1-202ENST00000477757 C9orf129Q5T035 196 aaKnown RBP11.84□□□□□ -0.51
PDLIM1-202ENST00000477757 TYMSOSQ8TAI1 123 aa11.84□□□□□ -0.51
PDLIM1-202ENST00000477757 BORCS7Q96B45 105 aa11.84□□□□□ -0.51
PDLIM1-202ENST00000477757 CRCT1Q9UGL9 99 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms