RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 WFDC2Q14508 124 aa11.77□□□□□ -0.52
PTPN7-209ENST00000477554 COA6Q5JTJ3 125 aaKnown RBP11.77□□□□□ -0.52
PTPN7-209ENST00000477554 NTM-AS1Q6ZSK4 140 aa11.77□□□□□ -0.52
PTPN7-209ENST00000477554 DEFB104AQ8WTQ1 72 aa11.77□□□□□ -0.52
PTPN7-209ENST00000477554 URB1-AS1Q96HZ7 61 aa11.77□□□□□ -0.52
PTPN7-209ENST00000477554 SERF1AO75920 110 aa11.77□□□□□ -0.53
PTPN7-209ENST00000477554 C10orf126Q8N4M7 172 aa11.77□□□□□ -0.53
PTPN7-209ENST00000477554 DNAH8Q96JB1 4490 aa11.76□□□□□ -0.53
PTPN7-209ENST00000477554 HSBP1O75506 76 aa11.76□□□□□ -0.53
PTPN7-209ENST00000477554 NFE4Q86UQ8 179 aa11.76□□□□□ -0.53
PTPN7-209ENST00000477554 MAPKAPK5-AS1Q8N8E1 139 aa11.76□□□□□ -0.53
PTPN7-209ENST00000477554 TMEM18Q96B42 140 aa11.76□□□□□ -0.53
PTPN7-209ENST00000477554 K7EP13 123 aa11.75□□□□□ -0.53
PTPN7-209ENST00000477554 TMEM243Q9BU79 118 aa11.75□□□□□ -0.53
PTPN7-209ENST00000477554 CHCHD7Q9BUK0 85 aa11.75□□□□□ -0.53
PTPN7-209ENST00000477554 LINC01549A6NIU2 74 aa11.74□□□□□ -0.53
PTPN7-209ENST00000477554 ESDP10768 282 aa11.74□□□□□ -0.53
PTPN7-209ENST00000477554 LINC00310P59036 64 aa11.74□□□□□ -0.53
PTPN7-209ENST00000477554 H7C423 109 aa11.73□□□□□ -0.53
PTPN7-209ENST00000477554 UBE2L6O14933 153 aa11.73□□□□□ -0.53
PTPN7-209ENST00000477554 SMAGPQ0VAQ4 97 aa11.73□□□□□ -0.53
PTPN7-209ENST00000477554 C20orf203Q8NBC4 194 aa11.73□□□□□ -0.53
PTPN7-209ENST00000477554 KRTAP10-1P60331 282 aa11.72□□□□□ -0.53
PTPN7-209ENST00000477554 PKIAP61925 76 aa11.72□□□□□ -0.53
PTPN7-209ENST00000477554 CHCHD5Q9BSY4 110 aa11.72□□□□□ -0.53
PTPN7-209ENST00000477554 KLK12Q9UKR0 248 aa11.72□□□□□ -0.53
PTPN7-209ENST00000477554 CYSLTR1Q9Y271 337 aa11.72□□□□□ -0.53
PTPN7-209ENST00000477554 TMA7Q9Y2S6 64 aaKnown RBP11.72□□□□□ -0.53
PTPN7-209ENST00000477554 LECT2O14960 151 aa11.71□□□□□ -0.53
PTPN7-209ENST00000477554 NUPR1O60356 82 aa11.71□□□□□ -0.53
PTPN7-209ENST00000477554 HBDP02042 147 aa11.71□□□□□ -0.53
PTPN7-209ENST00000477554 C2orf66Q6UXQ4 117 aa11.71□□□□□ -0.53
PTPN7-209ENST00000477554 FAT1Q14517 4588 aa11.71□□□□□ -0.53
PTPN7-209ENST00000477554 MPV17L2Q567V2 206 aa11.7□□□□□ -0.54
PTPN7-209ENST00000477554 TOMM6Q96B49 74 aa11.7□□□□□ -0.54
PTPN7-209ENST00000477554 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.69□□□□□ -0.54
PTPN7-209ENST00000477554 IGKV2-29A2NJV5 120 aaPredicted RBP11.69□□□□□ -0.54
PTPN7-209ENST00000477554 PSCAO43653 123 aa11.69□□□□□ -0.54
PTPN7-209ENST00000477554 PMCHL1Q16048 86 aa11.69□□□□□ -0.54
PTPN7-209ENST00000477554 FAM19A2Q8N3H0 131 aa11.69□□□□□ -0.54
PTPN7-209ENST00000477554 TMEM262E9PQX1 116 aa11.69□□□□□ -0.54
PTPN7-209ENST00000477554 RPL39P62891 51 aaKnown RBP11.69□□□□□ -0.54
PTPN7-209ENST00000477554 Q8N976 141 aa11.69□□□□□ -0.54
PTPN7-209ENST00000477554 A0A096LNJ9 63 aa11.68□□□□□ -0.54
PTPN7-209ENST00000477554 CDK2AP2O75956 126 aa11.68□□□□□ -0.54
PTPN7-209ENST00000477554 ZNF25P17030 456 aaPredicted RBP11.68□□□□□ -0.54
PTPN7-209ENST00000477554 SNRPEP62304 92 aaKnown RBP11.68□□□□□ -0.54
PTPN7-209ENST00000477554 HAMPP81172 84 aa11.68□□□□□ -0.54
PTPN7-209ENST00000477554 GAGE6Q13070 117 aa11.68□□□□□ -0.54
PTPN7-209ENST00000477554 AMMECR1LQ6DCA0 310 aa11.68□□□□□ -0.54
PTPN7-209ENST00000477554 MRPL52Q86TS9 123 aaKnown RBP11.68□□□□□ -0.54
PTPN7-209ENST00000477554 TIMM21Q9BVV7 248 aa11.68□□□□□ -0.54
PTPN7-209ENST00000477554 C5orf52A6NGY3 159 aa11.67□□□□□ -0.54
PTPN7-209ENST00000477554 FGF6P10767 208 aa11.67□□□□□ -0.54
PTPN7-209ENST00000477554 ENHOQ6UWT2 76 aa11.67□□□□□ -0.54
PTPN7-209ENST00000477554 UBE2WQ96B02 151 aa11.67□□□□□ -0.54
PTPN7-209ENST00000477554 SPANXA1Q9NS26 97 aa11.67□□□□□ -0.54
PTPN7-209ENST00000477554 UBE2D4Q9Y2X8 147 aa11.67□□□□□ -0.54
PTPN7-209ENST00000477554 PYGO1Q9Y3Y4 419 aa11.67□□□□□ -0.54
PTPN7-209ENST00000477554 CSDC2Q9Y534 153 aaKnown RBP11.67□□□□□ -0.54
PTPN7-209ENST00000477554 A0A087WX48 190 aa11.66□□□□□ -0.54
PTPN7-209ENST00000477554 A0A1B0GUV1 79 aa11.66□□□□□ -0.54
PTPN7-209ENST00000477554 EREGO14944 169 aa11.66□□□□□ -0.54
PTPN7-209ENST00000477554 S100A2P29034 98 aa11.66□□□□□ -0.54
PTPN7-209ENST00000477554 DGAT2L7PQ6IED9 249 aa11.66□□□□□ -0.54
PTPN7-209ENST00000477554 ERASQ7Z444 233 aa11.66□□□□□ -0.54
PTPN7-209ENST00000477554 Q8N814 137 aa11.66□□□□□ -0.54
PTPN7-209ENST00000477554 BAALCQ8WXS3 180 aa11.66□□□□□ -0.54
PTPN7-209ENST00000477554 TMEM101Q96IK0 257 aa11.66□□□□□ -0.54
PTPN7-209ENST00000477554 SCGB3A1Q96QR1 104 aa11.66□□□□□ -0.54
PTPN7-209ENST00000477554 PGPEP1Q9NXJ5 209 aa11.66□□□□□ -0.54
PTPN7-209ENST00000477554 LEPROTL1O95214 131 aa11.65□□□□□ -0.54
PTPN7-209ENST00000477554 NPSP0C0P6 89 aa11.65□□□□□ -0.54
PTPN7-209ENST00000477554 XGP55808 180 aa11.65□□□□□ -0.54
PTPN7-209ENST00000477554 PDZD11Q5EBL8 140 aa11.65□□□□□ -0.54
PTPN7-209ENST00000477554 CLPSL2Q6UWE3 100 aa11.65□□□□□ -0.54
PTPN7-209ENST00000477554 HIST3H2BBQ8N257 126 aa11.65□□□□□ -0.54
PTPN7-209ENST00000477554 PACRGQ96M98 296 aaPredicted RBP11.65□□□□□ -0.54
PTPN7-209ENST00000477554 TIMM17AQ99595 171 aa11.65□□□□□ -0.54
PTPN7-209ENST00000477554 ATP5LO75964 103 aa11.64□□□□□ -0.55
PTPN7-209ENST00000477554 TMEM141Q96I45 108 aa11.64□□□□□ -0.55
PTPN7-209ENST00000477554 HSPB8Q9UJY1 196 aa11.64□□□□□ -0.55
PTPN7-209ENST00000477554 IGKV2D-24A0A075B6R9 120 aa11.63□□□□□ -0.55
PTPN7-209ENST00000477554 TRAV8-3A0A0A6YYJ7 113 aa11.63□□□□□ -0.55
PTPN7-209ENST00000477554 IGIPA6NJ69 53 aa11.63□□□□□ -0.55
PTPN7-209ENST00000477554 OR5A1Q8NGJ0 315 aa11.63□□□□□ -0.55
PTPN7-209ENST00000477554 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.62□□□□□ -0.55
PTPN7-209ENST00000477554 RBX1P62877 108 aa11.62□□□□□ -0.55
PTPN7-209ENST00000477554 PAPPA-AS1Q5QFB9 102 aa11.62□□□□□ -0.55
PTPN7-209ENST00000477554 IGLV5-52A0A0A0MRZ9 124 aa11.61□□□□□ -0.55
PTPN7-209ENST00000477554 ANGP03950 147 aaKnown RBP11.61□□□□□ -0.55
PTPN7-209ENST00000477554 FABP4P15090 132 aa11.61□□□□□ -0.55
PTPN7-209ENST00000477554 MRPS36P82909 103 aaKnown RBP11.61□□□□□ -0.55
PTPN7-209ENST00000477554 LINC01620Q4KN68 170 aa11.61□□□□□ -0.55
PTPN7-209ENST00000477554 CDPF1Q6NVV7 123 aa11.61□□□□□ -0.55
PTPN7-209ENST00000477554 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.6□□□□□ -0.55
PTPN7-209ENST00000477554 Q6ZN92 141 aa11.6□□□□□ -0.55
PTPN7-209ENST00000477554 IFI27L1Q96BM0 104 aa11.6□□□□□ -0.55
PTPN7-209ENST00000477554 FAM30AQ9NZY2 134 aa11.6□□□□□ -0.55
PTPN7-209ENST00000477554 IGLV4-60A0A075B6I1 120 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms