RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 SLPIP03973 132 aa10.06□□□□□ -0.8
CLDN11-204ENST00000477531 ESDP10768 282 aa10.06□□□□□ -0.8
CLDN11-204ENST00000477531 SMAGPQ0VAQ4 97 aa10.06□□□□□ -0.8
CLDN11-204ENST00000477531 NDUFA5Q16718 116 aa10.06□□□□□ -0.8
CLDN11-204ENST00000477531 HIGD2BQ4VC39 106 aa10.06□□□□□ -0.8
CLDN11-204ENST00000477531 AMN1Q8IY45 258 aa10.06□□□□□ -0.8
CLDN11-204ENST00000477531 C15orf56Q8N910 161 aa10.06□□□□□ -0.8
CLDN11-204ENST00000477531 NUP35Q8NFH5 326 aa10.06□□□□□ -0.8
CLDN11-204ENST00000477531 ISOC2Q96AB3 205 aa10.06□□□□□ -0.8
CLDN11-204ENST00000477531 SEC11CQ9BY50 192 aa10.06□□□□□ -0.8
CLDN11-204ENST00000477531 NAT8BQ9UHF3 227 aa10.06□□□□□ -0.8
CLDN11-204ENST00000477531 TRBV27A0A0K0K1C4 114 aa10.05□□□□□ -0.8
CLDN11-204ENST00000477531 C7orf77A4D0Y5 90 aa10.05□□□□□ -0.8
CLDN11-204ENST00000477531 PANO1I0J062 215 aa10.05□□□□□ -0.8
CLDN11-204ENST00000477531 VCYO14598 125 aa10.05□□□□□ -0.8
CLDN11-204ENST00000477531 GAS8-AS1O95177 125 aa10.05□□□□□ -0.8
CLDN11-204ENST00000477531 FCER1GP30273 86 aa10.05□□□□□ -0.8
CLDN11-204ENST00000477531 POLR2KP53803 58 aaKnown RBP10.05□□□□□ -0.8
CLDN11-204ENST00000477531 SS18Q15532 418 aa10.05□□□□□ -0.8
CLDN11-204ENST00000477531 XCL1P47992 114 aa10.04□□□□□ -0.8
CLDN11-204ENST00000477531 CIRBPQ14011 172 aaKnown RBP10.04□□□□□ -0.8
CLDN11-204ENST00000477531 GVQW2A0A096LPI5 108 aaPredicted RBP10.03□□□□□ -0.8
CLDN11-204ENST00000477531 LINC00959A0A1B0GUT2 108 aa10.03□□□□□ -0.8
CLDN11-204ENST00000477531 CCL25O15444 150 aa10.03□□□□□ -0.8
CLDN11-204ENST00000477531 ADCYAP1P18509 176 aa10.03□□□□□ -0.8
CLDN11-204ENST00000477531 FOXI1Q12951 378 aa10.03□□□□□ -0.8
CLDN11-204ENST00000477531 MRPL52Q86TS9 123 aaKnown RBP10.03□□□□□ -0.8
CLDN11-204ENST00000477531 KIR2DL4Q99706 377 aa10.03□□□□□ -0.8
CLDN11-204ENST00000477531 A0A087WYN8 130 aa10.02□□□□□ -0.81
CLDN11-204ENST00000477531 SMKR1H3BMG3 65 aa10.02□□□□□ -0.81
CLDN11-204ENST00000477531 PPP1R2P9O14990 202 aa10.02□□□□□ -0.81
CLDN11-204ENST00000477531 CHTF8P0CG12 524 aa10.02□□□□□ -0.81
CLDN11-204ENST00000477531 SUMO2P61956 95 aaKnown RBP10.02□□□□□ -0.81
CLDN11-204ENST00000477531 COX6A2Q02221 97 aa10.02□□□□□ -0.81
CLDN11-204ENST00000477531 ZNF664Q8N3J9 261 aa10.02□□□□□ -0.81
CLDN11-204ENST00000477531 SPACA4Q8TDM5 124 aa10.02□□□□□ -0.81
CLDN11-204ENST00000477531 CDC42SE2Q9NRR3 84 aa10.02□□□□□ -0.81
CLDN11-204ENST00000477531 PKIGQ9Y2B9 76 aa10.02□□□□□ -0.81
CLDN11-204ENST00000477531 LRP1Q07954 4544 aaKnown RBP10.02□□□□□ -0.81
CLDN11-204ENST00000477531 FAT3Q8TDW7 4589 aa10.01□□□□□ -0.81
CLDN11-204ENST00000477531 IGHV1-58A0A0C4DH39 117 aa10.01□□□□□ -0.81
CLDN11-204ENST00000477531 A0A1B0GW15 77 aa10.01□□□□□ -0.81
CLDN11-204ENST00000477531 C10orf91Q5T1B1 145 aa10.01□□□□□ -0.81
CLDN11-204ENST00000477531 CARHSP1Q9Y2V2 147 aaKnown RBP10.01□□□□□ -0.81
CLDN11-204ENST00000477531 PKHD1L1Q86WI1 4243 aa10□□□□□ -0.81
CLDN11-204ENST00000477531 CAMPP49913 170 aa10□□□□□ -0.81
CLDN11-204ENST00000477531 FAM104BQ5XKR9 115 aa10□□□□□ -0.81
CLDN11-204ENST00000477531 C7orf33Q8WU49 177 aa10□□□□□ -0.81
CLDN11-204ENST00000477531 TMEM18Q96B42 140 aa10□□□□□ -0.81
CLDN11-204ENST00000477531 IGKV2-24A0A0C4DH68 120 aa9.99□□□□□ -0.81
CLDN11-204ENST00000477531 SMIM27A0A1W2PRY6 76 aa9.99□□□□□ -0.81
CLDN11-204ENST00000477531 ZNF561-AS1K7EIQ3 104 aa9.99□□□□□ -0.81
CLDN11-204ENST00000477531 MT-ND4LP03901 98 aa9.99□□□□□ -0.81
CLDN11-204ENST00000477531 S100A8P05109 93 aa9.99□□□□□ -0.81
CLDN11-204ENST00000477531 MAJINQ3KP22 176 aa9.99□□□□□ -0.81
CLDN11-204ENST00000477531 CD164L2Q6UWJ8 174 aa9.99□□□□□ -0.81
CLDN11-204ENST00000477531 NRACQ8N912 160 aa9.99□□□□□ -0.81
CLDN11-204ENST00000477531 PRSS3P2Q8NHM4 247 aa9.99□□□□□ -0.81
CLDN11-204ENST00000477531 ANAPC16Q96DE5 110 aa9.99□□□□□ -0.81
CLDN11-204ENST00000477531 PLAC8Q9NZF1 115 aa9.99□□□□□ -0.81
CLDN11-204ENST00000477531 C1orf196B1AJZ1 125 aa9.98□□□□□ -0.81
CLDN11-204ENST00000477531 TCAPO15273 167 aa9.98□□□□□ -0.81
CLDN11-204ENST00000477531 CKS2P33552 79 aa9.98□□□□□ -0.81
CLDN11-204ENST00000477531 MRPL51Q4U2R6 128 aaKnown RBP9.98□□□□□ -0.81
CLDN11-204ENST00000477531 SERTAD4-AS1Q5TG53 156 aa9.98□□□□□ -0.81
CLDN11-204ENST00000477531 LINC00474Q9P2X8 69 aa9.98□□□□□ -0.81
CLDN11-204ENST00000477531 CSDC2Q9Y534 153 aaKnown RBP9.98□□□□□ -0.81
CLDN11-204ENST00000477531 MALP21145 153 aa9.97□□□□□ -0.81
CLDN11-204ENST00000477531 C20orf78Q9BR46 151 aa9.97□□□□□ -0.81
CLDN11-204ENST00000477531 HNRNPA3P51991 378 aaKnown RBP9.96□□□□□ -0.82
CLDN11-204ENST00000477531 SLC7A5P1Q8MH63 180 aa9.96□□□□□ -0.82
CLDN11-204ENST00000477531 CARD19Q96LW7 228 aa9.96□□□□□ -0.82
CLDN11-204ENST00000477531 COX7A2LO14548 114 aa9.95□□□□□ -0.82
CLDN11-204ENST00000477531 HBBP68871 147 aa9.95□□□□□ -0.82
CLDN11-204ENST00000477531 RHEBQ15382 184 aa9.95□□□□□ -0.82
CLDN11-204ENST00000477531 Q6ZRU5 148 aa9.95□□□□□ -0.82
CLDN11-204ENST00000477531 SVBPQ8N300 66 aa9.95□□□□□ -0.82
CLDN11-204ENST00000477531 STPG4Q8N801 248 aa9.95□□□□□ -0.82
CLDN11-204ENST00000477531 CTDSP1Q9GZU7 261 aa9.95□□□□□ -0.82
CLDN11-204ENST00000477531 UBE2D4Q9Y2X8 147 aa9.95□□□□□ -0.82
CLDN11-204ENST00000477531 TRBV24-1A0A075B6N3 115 aa9.94□□□□□ -0.82
CLDN11-204ENST00000477531 TRAV13-1A0A0B4J241 112 aa9.94□□□□□ -0.82
CLDN11-204ENST00000477531 SNAPINO95295 136 aa9.94□□□□□ -0.82
CLDN11-204ENST00000477531 APOC3P02656 99 aa9.94□□□□□ -0.82
CLDN11-204ENST00000477531 RPL32P62910 135 aaKnown RBP9.94□□□□□ -0.82
CLDN11-204ENST00000477531 SYCNQ0VAF6 134 aa9.94□□□□□ -0.82
CLDN11-204ENST00000477531 MRPL54Q6P161 138 aaKnown RBP9.94□□□□□ -0.82
CLDN11-204ENST00000477531 LINC00526Q96FQ7 95 aa9.94□□□□□ -0.82
CLDN11-204ENST00000477531 TIMM21Q9BVV7 248 aa9.94□□□□□ -0.82
CLDN11-204ENST00000477531 PHOX2AO14813 284 aa9.93□□□□□ -0.82
CLDN11-204ENST00000477531 TNFRSF6BO95407 300 aa9.93□□□□□ -0.82
CLDN11-204ENST00000477531 A0A096LNI7 61 aa9.92□□□□□ -0.82
CLDN11-204ENST00000477531 D6R8Y8 96 aa9.92□□□□□ -0.82
CLDN11-204ENST00000477531 APOMO95445 188 aa9.92□□□□□ -0.82
CLDN11-204ENST00000477531 PPBPP02775 128 aa9.92□□□□□ -0.82
CLDN11-204ENST00000477531 RNASE13Q5GAN3 156 aaKnown RBP9.92□□□□□ -0.82
CLDN11-204ENST00000477531 Q6ZUT4 128 aa9.91□□□□□ -0.82
CLDN11-204ENST00000477531 IMMP2LQ96T52 175 aa9.91□□□□□ -0.82
CLDN11-204ENST00000477531 SMIM2Q9BVW6 85 aa9.91□□□□□ -0.82
CLDN11-204ENST00000477531 IGLV4-69A0A075B6H9 119 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms