RNA–Protein interactions for RNA: ENST00000477002.1

CNTNAP3-209, Transcript of contactin associated protein like 3, humanhuman

TSL 5

Gene CNTNAP3, Length 291 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-209ENST00000477002 SMIM27A0A1W2PRY6 76 aa11.58□□□□□ -0.56
CNTNAP3-209ENST00000477002 J3QL48 77 aa11.58□□□□□ -0.56
CNTNAP3-209ENST00000477002 MRPL52Q86TS9 123 aaKnown RBP11.58□□□□□ -0.56
CNTNAP3-209ENST00000477002 A0A1B0GW15 77 aa11.57□□□□□ -0.56
CNTNAP3-209ENST00000477002 C7orf77A4D0Y5 90 aa11.57□□□□□ -0.56
CNTNAP3-209ENST00000477002 KRTAP29-1A8MX34 341 aaPredicted RBP11.57□□□□□ -0.56
CNTNAP3-209ENST00000477002 SMKR1H3BMG3 65 aa11.57□□□□□ -0.56
CNTNAP3-209ENST00000477002 PANO1I0J062 215 aa11.57□□□□□ -0.56
CNTNAP3-209ENST00000477002 CIRBPQ14011 172 aaKnown RBP11.57□□□□□ -0.56
CNTNAP3-209ENST00000477002 LINC00959A0A1B0GUT2 108 aa11.56□□□□□ -0.56
CNTNAP3-209ENST00000477002 FCER1GP30273 86 aa11.56□□□□□ -0.56
CNTNAP3-209ENST00000477002 RPL37AP61513 92 aaKnown RBP11.56□□□□□ -0.56
CNTNAP3-209ENST00000477002 SUMO2P61956 95 aaKnown RBP11.56□□□□□ -0.56
CNTNAP3-209ENST00000477002 FOXI1Q12951 378 aa11.56□□□□□ -0.56
CNTNAP3-209ENST00000477002 FAM104BQ5XKR9 115 aa11.56□□□□□ -0.56
CNTNAP3-209ENST00000477002 NRACQ8N912 160 aa11.56□□□□□ -0.56
CNTNAP3-209ENST00000477002 CDC42SE2Q9NRR3 84 aa11.56□□□□□ -0.56
CNTNAP3-209ENST00000477002 PPP1R2P9O14990 202 aa11.55□□□□□ -0.56
CNTNAP3-209ENST00000477002 CAMPP49913 170 aa11.55□□□□□ -0.56
CNTNAP3-209ENST00000477002 HIGD2BQ4VC39 106 aa11.55□□□□□ -0.56
CNTNAP3-209ENST00000477002 KIR2DL4Q99706 377 aa11.55□□□□□ -0.56
CNTNAP3-209ENST00000477002 GVQW2A0A096LPI5 108 aaPredicted RBP11.54□□□□□ -0.56
CNTNAP3-209ENST00000477002 LINC00862A6NCI5 91 aa11.54□□□□□ -0.56
CNTNAP3-209ENST00000477002 XCL1P47992 114 aa11.54□□□□□ -0.56
CNTNAP3-209ENST00000477002 SS18Q15532 418 aa11.54□□□□□ -0.56
CNTNAP3-209ENST00000477002 MRPL51Q4U2R6 128 aaKnown RBP11.54□□□□□ -0.56
CNTNAP3-209ENST00000477002 ZNF664Q8N3J9 261 aa11.54□□□□□ -0.56
CNTNAP3-209ENST00000477002 DPH3Q96FX2 82 aa11.54□□□□□ -0.56
CNTNAP3-209ENST00000477002 CCL25O15444 150 aa11.53□□□□□ -0.56
CNTNAP3-209ENST00000477002 SMAGPQ0VAQ4 97 aa11.53□□□□□ -0.56
CNTNAP3-209ENST00000477002 S100A8P05109 93 aa11.52□□□□□ -0.57
CNTNAP3-209ENST00000477002 SPACA4Q8TDM5 124 aa11.52□□□□□ -0.57
CNTNAP3-209ENST00000477002 C20orf78Q9BR46 151 aa11.52□□□□□ -0.57
CNTNAP3-209ENST00000477002 CSDC2Q9Y534 153 aaKnown RBP11.52□□□□□ -0.57
CNTNAP3-209ENST00000477002 TRBV24-1A0A075B6N3 115 aa11.51□□□□□ -0.57
CNTNAP3-209ENST00000477002 CKS2P33552 79 aa11.51□□□□□ -0.57
CNTNAP3-209ENST00000477002 A0A087WYN8 130 aa11.5□□□□□ -0.57
CNTNAP3-209ENST00000477002 IGHV1-58A0A0C4DH39 117 aa11.5□□□□□ -0.57
CNTNAP3-209ENST00000477002 F8W036 122 aa11.5□□□□□ -0.57
CNTNAP3-209ENST00000477002 CHTF8P0CG12 524 aa11.5□□□□□ -0.57
CNTNAP3-209ENST00000477002 HBBP68871 147 aa11.5□□□□□ -0.57
CNTNAP3-209ENST00000477002 COX6A2Q02221 97 aa11.5□□□□□ -0.57
CNTNAP3-209ENST00000477002 CD164L2Q6UWJ8 174 aa11.5□□□□□ -0.57
CNTNAP3-209ENST00000477002 TMEM18Q96B42 140 aa11.5□□□□□ -0.57
CNTNAP3-209ENST00000477002 UBE2D4Q9Y2X8 147 aa11.5□□□□□ -0.57
CNTNAP3-209ENST00000477002 TCAPO15273 167 aa11.49□□□□□ -0.57
CNTNAP3-209ENST00000477002 RPL32P62910 135 aaKnown RBP11.49□□□□□ -0.57
CNTNAP3-209ENST00000477002 MRPL54Q6P161 138 aaKnown RBP11.49□□□□□ -0.57
CNTNAP3-209ENST00000477002 A0A1B0GXF2 115 aa11.48□□□□□ -0.57
CNTNAP3-209ENST00000477002 C1orf196B1AJZ1 125 aa11.48□□□□□ -0.57
CNTNAP3-209ENST00000477002 TNFRSF6BO95407 300 aa11.48□□□□□ -0.57
CNTNAP3-209ENST00000477002 OXTP01178 125 aa11.48□□□□□ -0.57
CNTNAP3-209ENST00000477002 PRSS3P2Q8NHM4 247 aa11.47□□□□□ -0.57
CNTNAP3-209ENST00000477002 TIMM21Q9BVV7 248 aa11.47□□□□□ -0.57
CNTNAP3-209ENST00000477002 PLAC8Q9NZF1 115 aa11.47□□□□□ -0.57
CNTNAP3-209ENST00000477002 D6R8Y8 96 aa11.46□□□□□ -0.57
CNTNAP3-209ENST00000477002 PPBPP02775 128 aa11.46□□□□□ -0.57
CNTNAP3-209ENST00000477002 PKIGQ9Y2B9 76 aa11.46□□□□□ -0.57
CNTNAP3-209ENST00000477002 ZNF561-AS1K7EIQ3 104 aa11.45□□□□□ -0.58
CNTNAP3-209ENST00000477002 RAB14P61106 215 aa11.45□□□□□ -0.58
CNTNAP3-209ENST00000477002 ATP5L2Q7Z4Y8 100 aa11.45□□□□□ -0.58
CNTNAP3-209ENST00000477002 SMIM2Q9BVW6 85 aa11.45□□□□□ -0.58
CNTNAP3-209ENST00000477002 IGKV2-24A0A0C4DH68 120 aa11.44□□□□□ -0.58
CNTNAP3-209ENST00000477002 PHOX2AO14813 284 aa11.44□□□□□ -0.58
CNTNAP3-209ENST00000477002 MALP21145 153 aa11.44□□□□□ -0.58
CNTNAP3-209ENST00000477002 MAJINQ3KP22 176 aa11.44□□□□□ -0.58
CNTNAP3-209ENST00000477002 RNASE13Q5GAN3 156 aaKnown RBP11.44□□□□□ -0.58
CNTNAP3-209ENST00000477002 TRAV13-1A0A0B4J241 112 aa11.43□□□□□ -0.58
CNTNAP3-209ENST00000477002 COX7A2LO14548 114 aa11.43□□□□□ -0.58
CNTNAP3-209ENST00000477002 HNRNPA3P51991 378 aaKnown RBP11.43□□□□□ -0.58
CNTNAP3-209ENST00000477002 PNRC1Q12796 327 aaPredicted RBP11.43□□□□□ -0.58
CNTNAP3-209ENST00000477002 Q6ZUT4 128 aa11.43□□□□□ -0.58
CNTNAP3-209ENST00000477002 LINC00526Q96FQ7 95 aa11.43□□□□□ -0.58
CNTNAP3-209ENST00000477002 CARD19Q96LW7 228 aa11.43□□□□□ -0.58
CNTNAP3-209ENST00000477002 LINC00474Q9P2X8 69 aa11.43□□□□□ -0.58
CNTNAP3-209ENST00000477002 NPYP01303 97 aa11.42□□□□□ -0.58
CNTNAP3-209ENST00000477002 SYCNQ0VAF6 134 aa11.42□□□□□ -0.58
CNTNAP3-209ENST00000477002 ORMDL3Q8N138 153 aa11.42□□□□□ -0.58
CNTNAP3-209ENST00000477002 C7orf33Q8WU49 177 aa11.42□□□□□ -0.58
CNTNAP3-209ENST00000477002 A0A096LNI7 61 aa11.41□□□□□ -0.58
CNTNAP3-209ENST00000477002 RPL39P62891 51 aaKnown RBP11.41□□□□□ -0.58
CNTNAP3-209ENST00000477002 TMEM136Q6ZRR5 245 aa11.41□□□□□ -0.58
CNTNAP3-209ENST00000477002 STPG4Q8N801 248 aa11.41□□□□□ -0.58
CNTNAP3-209ENST00000477002 SPANXA1Q9NS26 97 aa11.41□□□□□ -0.58
CNTNAP3-209ENST00000477002 LRP1Q07954 4544 aaKnown RBP11.4□□□□□ -0.58
CNTNAP3-209ENST00000477002 MT-ND4LP03901 98 aa11.4□□□□□ -0.58
CNTNAP3-209ENST00000477002 ANAPC16Q96DE5 110 aa11.4□□□□□ -0.58
CNTNAP3-209ENST00000477002 IGLV4-69A0A075B6H9 119 aa11.39□□□□□ -0.59
CNTNAP3-209ENST00000477002 PRELID3AQ96N28 172 aa11.39□□□□□ -0.59
CNTNAP3-209ENST00000477002 APOMO95445 188 aa11.38□□□□□ -0.59
CNTNAP3-209ENST00000477002 RAB5AP20339 215 aa11.38□□□□□ -0.59
CNTNAP3-209ENST00000477002 MRPS36P82909 103 aaKnown RBP11.38□□□□□ -0.59
CNTNAP3-209ENST00000477002 Q6ZRU5 148 aa11.38□□□□□ -0.59
CNTNAP3-209ENST00000477002 C5orf38Q86SI9 138 aa11.37□□□□□ -0.59
CNTNAP3-209ENST00000477002 FAM104AQ969W3 186 aa11.37□□□□□ -0.59
CNTNAP3-209ENST00000477002 C2orf48Q96LS8 159 aa11.36□□□□□ -0.59
CNTNAP3-209ENST00000477002 CAMK2N2Q96S95 79 aa11.36□□□□□ -0.59
CNTNAP3-209ENST00000477002 LAMTOR2Q9Y2Q5 125 aa11.36□□□□□ -0.59
CNTNAP3-209ENST00000477002 PRSS47A8MTI9 375 aa11.35□□□□□ -0.59
CNTNAP3-209ENST00000477002 CLLU1Q5K131 121 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms