RNA–Protein interactions for RNA: ENST00000476642.5

HLA-DPA1-246, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-246ENST00000476642 HECTD4Q9Y4D8 3996 aa8.9□□□□□ -0.99
HLA-DPA1-246ENST00000476642 PSCAO43653 123 aa8.89□□□□□ -0.99
HLA-DPA1-246ENST00000476642 ESDP10768 282 aa8.89□□□□□ -0.99
HLA-DPA1-246ENST00000476642 C14orf144Q96I85 54 aa8.89□□□□□ -0.99
HLA-DPA1-246ENST00000476642 TGIF2-C20orf24A0A0A6YYL0 155 aa8.88□□□□□ -0.99
HLA-DPA1-246ENST00000476642 EREGO14944 169 aa8.88□□□□□ -0.99
HLA-DPA1-246ENST00000476642 G0S2P27469 103 aa8.88□□□□□ -0.99
HLA-DPA1-246ENST00000476642 MIAQ16674 131 aa8.88□□□□□ -0.99
HLA-DPA1-246ENST00000476642 RNASEKQ6P5S7 137 aaKnown RBP8.88□□□□□ -0.99
HLA-DPA1-246ENST00000476642 Q8N976 141 aa8.88□□□□□ -0.99
HLA-DPA1-246ENST00000476642 DEFB104AQ8WTQ1 72 aa8.88□□□□□ -0.99
HLA-DPA1-246ENST00000476642 UBE2WQ96B02 151 aa8.88□□□□□ -0.99
HLA-DPA1-246ENST00000476642 PACRGQ96M98 296 aaPredicted RBP8.88□□□□□ -0.99
HLA-DPA1-246ENST00000476642 MRPL18Q9H0U6 180 aaKnown RBP8.88□□□□□ -0.99
HLA-DPA1-246ENST00000476642 Q9HAA7 133 aa8.88□□□□□ -0.99
HLA-DPA1-246ENST00000476642 NXT2Q9NPJ8 142 aaKnown RBP8.88□□□□□ -0.99
HLA-DPA1-246ENST00000476642 TRAPPC1Q9Y5R8 145 aa8.88□□□□□ -0.99
HLA-DPA1-246ENST00000476642 A0A1B0GVY2 172 aa8.87□□□□□ -0.99
HLA-DPA1-246ENST00000476642 IFITM10A6NMD0 228 aa8.87□□□□□ -0.99
HLA-DPA1-246ENST00000476642 TRGC2P03986 189 aa8.87□□□□□ -0.99
HLA-DPA1-246ENST00000476642 FGF6P10767 208 aa8.87□□□□□ -0.99
HLA-DPA1-246ENST00000476642 JOSD1Q15040 202 aaPredicted RBP8.87□□□□□ -0.99
HLA-DPA1-246ENST00000476642 DGAT2L7PQ6IED9 249 aa8.87□□□□□ -0.99
HLA-DPA1-246ENST00000476642 MRPL52Q86TS9 123 aaKnown RBP8.87□□□□□ -0.99
HLA-DPA1-246ENST00000476642 Q8N3U1 123 aa8.87□□□□□ -0.99
HLA-DPA1-246ENST00000476642 C1orf43Q9BWL3 253 aa8.87□□□□□ -0.99
HLA-DPA1-246ENST00000476642 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.86□□□□□ -0.99
HLA-DPA1-246ENST00000476642 TRAV8-4A0A0B4J246 113 aa8.86□□□□□ -0.99
HLA-DPA1-246ENST00000476642 IGKV2-29A2NJV5 120 aaPredicted RBP8.86□□□□□ -0.99
HLA-DPA1-246ENST00000476642 ORMDL2Q53FV1 153 aa8.86□□□□□ -0.99
HLA-DPA1-246ENST00000476642 COA6Q5JTJ3 125 aaKnown RBP8.86□□□□□ -0.99
HLA-DPA1-246ENST00000476642 Q6ZRN7 208 aaPredicted RBP8.86□□□□□ -0.99
HLA-DPA1-246ENST00000476642 Q8N8P6 123 aa8.86□□□□□ -0.99
HLA-DPA1-246ENST00000476642 OR5A1Q8NGJ0 315 aa8.86□□□□□ -0.99
HLA-DPA1-246ENST00000476642 PRR34Q9NV39 138 aa8.86□□□□□ -0.99
HLA-DPA1-246ENST00000476642 LOC389332A0A1B0GUA5 103 aa8.85□□□□□ -0.99
HLA-DPA1-246ENST00000476642 FABP4P15090 132 aa8.85□□□□□ -0.99
HLA-DPA1-246ENST00000476642 REG3AQ06141 175 aa8.85□□□□□ -0.99
HLA-DPA1-246ENST00000476642 KIAA1644Q3SXP7 199 aa8.85□□□□□ -0.99
HLA-DPA1-246ENST00000476642 LINC00269Q8N2A0 174 aa8.85□□□□□ -0.99
HLA-DPA1-246ENST00000476642 C20orf203Q8NBC4 194 aa8.85□□□□□ -0.99
HLA-DPA1-246ENST00000476642 TIMM21Q9BVV7 248 aa8.85□□□□□ -0.99
HLA-DPA1-246ENST00000476642 CSDC2Q9Y534 153 aaKnown RBP8.85□□□□□ -0.99
HLA-DPA1-246ENST00000476642 KIAA1109Q2LD37 5005 aa8.84□□□□□ -0.99
HLA-DPA1-246ENST00000476642 IGKV2D-24A0A075B6R9 120 aa8.84□□□□□ -0.99
HLA-DPA1-246ENST00000476642 PRSS3P2Q8NHM4 247 aa8.84□□□□□ -0.99
HLA-DPA1-246ENST00000476642 HIST1H2BLQ99880 126 aa8.84□□□□□ -0.99
HLA-DPA1-246ENST00000476642 ALKBH7Q9BT30 221 aaPredicted RBP8.84□□□□□ -0.99
HLA-DPA1-246ENST00000476642 IGLV4-60A0A075B6I1 120 aa8.83□□□□□ -1
HLA-DPA1-246ENST00000476642 LINC01549A6NIU2 74 aa8.83□□□□□ -1
HLA-DPA1-246ENST00000476642 TNP2Q05952 138 aa8.83□□□□□ -1
HLA-DPA1-246ENST00000476642 ENHOQ6UWT2 76 aa8.83□□□□□ -1
HLA-DPA1-246ENST00000476642 SPANXA1Q9NS26 97 aa8.83□□□□□ -1
HLA-DPA1-246ENST00000476642 PCLOQ9Y6V0 5065 aa8.82□□□□□ -1
HLA-DPA1-246ENST00000476642 UBE2D4Q9Y2X8 147 aa8.82□□□□□ -1
HLA-DPA1-246ENST00000476642 A0A1B0GV90 55 aa8.81□□□□□ -1
HLA-DPA1-246ENST00000476642 CCL25O15444 150 aa8.81□□□□□ -1
HLA-DPA1-246ENST00000476642 IFI27P40305 119 aaPredicted RBP8.81□□□□□ -1
HLA-DPA1-246ENST00000476642 ZNF664Q8N3J9 261 aa8.81□□□□□ -1
HLA-DPA1-246ENST00000476642 CDC42SE2Q9NRR3 84 aa8.81□□□□□ -1
HLA-DPA1-246ENST00000476642 CYSLTR1Q9Y271 337 aa8.81□□□□□ -1
HLA-DPA1-246ENST00000476642 DNAH2Q9P225 4427 aa8.81□□□□□ -1
HLA-DPA1-246ENST00000476642 CLPSL2Q6UWE3 100 aa8.8□□□□□ -1
HLA-DPA1-246ENST00000476642 FA2HQ7L5A8 372 aa8.8□□□□□ -1
HLA-DPA1-246ENST00000476642 PYGO1Q9Y3Y4 419 aa8.8□□□□□ -1
HLA-DPA1-246ENST00000476642 A0A087WTM6 91 aa8.79□□□□□ -1
HLA-DPA1-246ENST00000476642 NPSP0C0P6 89 aa8.79□□□□□ -1
HLA-DPA1-246ENST00000476642 SS18Q15532 418 aa8.79□□□□□ -1
HLA-DPA1-246ENST00000476642 C14orf177Q52M58 125 aa8.79□□□□□ -1
HLA-DPA1-246ENST00000476642 RPL39P62891 51 aaKnown RBP8.78□□□□□ -1
HLA-DPA1-246ENST00000476642 MRPS36P82909 103 aaKnown RBP8.78□□□□□ -1
HLA-DPA1-246ENST00000476642 PDZD11Q5EBL8 140 aa8.78□□□□□ -1
HLA-DPA1-246ENST00000476642 PAPPA-AS1Q5QFB9 102 aa8.78□□□□□ -1
HLA-DPA1-246ENST00000476642 C2orf66Q6UXQ4 117 aa8.78□□□□□ -1
HLA-DPA1-246ENST00000476642 PRO1933Q9H354 126 aa8.78□□□□□ -1
HLA-DPA1-246ENST00000476642 IGKV3OR2-268A0A0C4DH90 116 aa8.77□□□□□ -1.01
HLA-DPA1-246ENST00000476642 LINC01546A6NGU7 62 aa8.77□□□□□ -1.01
HLA-DPA1-246ENST00000476642 M0R143 59 aa8.77□□□□□ -1.01
HLA-DPA1-246ENST00000476642 CDPF1Q6NVV7 123 aa8.77□□□□□ -1.01
HLA-DPA1-246ENST00000476642 Q6ZN92 141 aa8.77□□□□□ -1.01
HLA-DPA1-246ENST00000476642 C18orf32Q8TCD1 76 aa8.77□□□□□ -1.01
HLA-DPA1-246ENST00000476642 AP5S1Q9NUS5 200 aa8.77□□□□□ -1.01
HLA-DPA1-246ENST00000476642 PGPEP1Q9NXJ5 209 aa8.77□□□□□ -1.01
HLA-DPA1-246ENST00000476642 IGLV10-54A0A075B6I4 117 aa8.76□□□□□ -1.01
HLA-DPA1-246ENST00000476642 LINC00959A0A1B0GUT2 108 aa8.76□□□□□ -1.01
HLA-DPA1-246ENST00000476642 LRCOL1A6NCL2 159 aa8.76□□□□□ -1.01
HLA-DPA1-246ENST00000476642 NTN5Q8WTR8 489 aaPredicted RBP8.76□□□□□ -1.01
HLA-DPA1-246ENST00000476642 C16orf90A8MZG2 172 aa8.75□□□□□ -1.01
HLA-DPA1-246ENST00000476642 LINC00614P0C842 121 aa8.75□□□□□ -1.01
HLA-DPA1-246ENST00000476642 CFAP161Q6P656 301 aa8.75□□□□□ -1.01
HLA-DPA1-246ENST00000476642 Q8N814 137 aa8.75□□□□□ -1.01
HLA-DPA1-246ENST00000476642 CHCHD10Q8WYQ3 142 aaPredicted RBP8.75□□□□□ -1.01
HLA-DPA1-246ENST00000476642 TMEM141Q96I45 108 aa8.75□□□□□ -1.01
HLA-DPA1-246ENST00000476642 DNAH17Q9UFH2 4485 aa8.75□□□□□ -1.01
HLA-DPA1-246ENST00000476642 FAT2Q9NYQ8 4349 aa8.74□□□□□ -1.01
HLA-DPA1-246ENST00000476642 TEX43Q6ZNM6 134 aa8.74□□□□□ -1.01
HLA-DPA1-246ENST00000476642 Q6ZUT4 128 aa8.74□□□□□ -1.01
HLA-DPA1-246ENST00000476642 SPATA12Q7Z6I5 190 aa8.74□□□□□ -1.01
HLA-DPA1-246ENST00000476642 BAALCQ8WXS3 180 aa8.74□□□□□ -1.01
HLA-DPA1-246ENST00000476642 TOMM6Q96B49 74 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms