RNA–Protein interactions for RNA: ENST00000476259.1

RAPGEF3-208, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene RAPGEF3, Length 824 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-208ENST00000476259 MRPL52Q86TS9 123 aaKnown RBP11.49□□□□□ -0.57
RAPGEF3-208ENST00000476259 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.49□□□□□ -0.57
RAPGEF3-208ENST00000476259 FLG2Q5D862 2391 aaPredicted RBP11.48□□□□□ -0.57
RAPGEF3-208ENST00000476259 PPP1R2P9O14990 202 aa11.48□□□□□ -0.57
RAPGEF3-208ENST00000476259 MRPL54Q6P161 138 aaKnown RBP11.48□□□□□ -0.57
RAPGEF3-208ENST00000476259 IGHV3-64A0A075B6Q5 118 aa11.47□□□□□ -0.57
RAPGEF3-208ENST00000476259 LINC00959A0A1B0GUT2 108 aa11.47□□□□□ -0.57
RAPGEF3-208ENST00000476259 LINC00862A6NCI5 91 aa11.47□□□□□ -0.57
RAPGEF3-208ENST00000476259 PANO1I0J062 215 aa11.47□□□□□ -0.57
RAPGEF3-208ENST00000476259 FOXI1Q12951 378 aa11.47□□□□□ -0.57
RAPGEF3-208ENST00000476259 HIGD2BQ4VC39 106 aa11.47□□□□□ -0.57
RAPGEF3-208ENST00000476259 KIR2DL4Q99706 377 aa11.47□□□□□ -0.57
RAPGEF3-208ENST00000476259 CDC42SE2Q9NRR3 84 aa11.47□□□□□ -0.57
RAPGEF3-208ENST00000476259 MYCBP2O75592 4640 aa11.46□□□□□ -0.57
RAPGEF3-208ENST00000476259 CCL25O15444 150 aa11.46□□□□□ -0.57
RAPGEF3-208ENST00000476259 S100A8P05109 93 aa11.46□□□□□ -0.57
RAPGEF3-208ENST00000476259 CKS2P33552 79 aa11.46□□□□□ -0.57
RAPGEF3-208ENST00000476259 XCL1P47992 114 aa11.46□□□□□ -0.57
RAPGEF3-208ENST00000476259 HBBP68871 147 aa11.46□□□□□ -0.57
RAPGEF3-208ENST00000476259 KRTAP10-4P60372 401 aaPredicted RBP11.45□□□□□ -0.58
RAPGEF3-208ENST00000476259 SS18Q15532 418 aa11.45□□□□□ -0.58
RAPGEF3-208ENST00000476259 ZNF664Q8N3J9 261 aa11.45□□□□□ -0.58
RAPGEF3-208ENST00000476259 A0A1B0GXF2 115 aa11.44□□□□□ -0.58
RAPGEF3-208ENST00000476259 F8W036 122 aa11.44□□□□□ -0.58
RAPGEF3-208ENST00000476259 RAB14P61106 215 aa11.44□□□□□ -0.58
RAPGEF3-208ENST00000476259 C20orf78Q9BR46 151 aa11.44□□□□□ -0.58
RAPGEF3-208ENST00000476259 TRBV24-1A0A075B6N3 115 aa11.43□□□□□ -0.58
RAPGEF3-208ENST00000476259 GVQW2A0A096LPI5 108 aaPredicted RBP11.43□□□□□ -0.58
RAPGEF3-208ENST00000476259 D6R8Y8 96 aa11.43□□□□□ -0.58
RAPGEF3-208ENST00000476259 TNFRSF6BO95407 300 aa11.43□□□□□ -0.58
RAPGEF3-208ENST00000476259 SMAGPQ0VAQ4 97 aa11.43□□□□□ -0.58
RAPGEF3-208ENST00000476259 CIRBPQ14011 172 aaKnown RBP11.43□□□□□ -0.58
RAPGEF3-208ENST00000476259 UBE2D4Q9Y2X8 147 aa11.43□□□□□ -0.58
RAPGEF3-208ENST00000476259 RPL37AP61513 92 aaKnown RBP11.42□□□□□ -0.58
RAPGEF3-208ENST00000476259 CSDC2Q9Y534 153 aaKnown RBP11.42□□□□□ -0.58
RAPGEF3-208ENST00000476259 DMBT1Q9UGM3 2413 aaPredicted RBP11.41□□□□□ -0.58
RAPGEF3-208ENST00000476259 CHTF8P0CG12 524 aa11.41□□□□□ -0.58
RAPGEF3-208ENST00000476259 RPL32P62910 135 aaKnown RBP11.41□□□□□ -0.58
RAPGEF3-208ENST00000476259 ATP5L2Q7Z4Y8 100 aa11.41□□□□□ -0.58
RAPGEF3-208ENST00000476259 TMEM18Q96B42 140 aa11.41□□□□□ -0.58
RAPGEF3-208ENST00000476259 DPH3Q96FX2 82 aa11.41□□□□□ -0.58
RAPGEF3-208ENST00000476259 IGHV1-58A0A0C4DH39 117 aa11.4□□□□□ -0.58
RAPGEF3-208ENST00000476259 J3QL48 77 aa11.4□□□□□ -0.58
RAPGEF3-208ENST00000476259 NPYP01303 97 aa11.4□□□□□ -0.58
RAPGEF3-208ENST00000476259 PNRC1Q12796 327 aaPredicted RBP11.4□□□□□ -0.58
RAPGEF3-208ENST00000476259 RNASE13Q5GAN3 156 aaKnown RBP11.4□□□□□ -0.58
RAPGEF3-208ENST00000476259 CD164L2Q6UWJ8 174 aa11.4□□□□□ -0.58
RAPGEF3-208ENST00000476259 SMIM2Q9BVW6 85 aa11.4□□□□□ -0.58
RAPGEF3-208ENST00000476259 TCAPO15273 167 aa11.39□□□□□ -0.59
RAPGEF3-208ENST00000476259 COX6A2Q02221 97 aa11.39□□□□□ -0.59
RAPGEF3-208ENST00000476259 SPACA4Q8TDM5 124 aa11.39□□□□□ -0.59
RAPGEF3-208ENST00000476259 A0A087WYN8 130 aa11.38□□□□□ -0.59
RAPGEF3-208ENST00000476259 C1orf196B1AJZ1 125 aa11.38□□□□□ -0.59
RAPGEF3-208ENST00000476259 PPBPP02775 128 aa11.38□□□□□ -0.59
RAPGEF3-208ENST00000476259 Q6ZUT4 128 aa11.38□□□□□ -0.59
RAPGEF3-208ENST00000476259 TIMM21Q9BVV7 248 aa11.38□□□□□ -0.59
RAPGEF3-208ENST00000476259 PHOX2AO14813 284 aa11.37□□□□□ -0.59
RAPGEF3-208ENST00000476259 MT-ND4LP03901 98 aa11.37□□□□□ -0.59
RAPGEF3-208ENST00000476259 RPL39P62891 51 aaKnown RBP11.37□□□□□ -0.59
RAPGEF3-208ENST00000476259 ORMDL3Q8N138 153 aa11.37□□□□□ -0.59
RAPGEF3-208ENST00000476259 PRSS3P2Q8NHM4 247 aa11.37□□□□□ -0.59
RAPGEF3-208ENST00000476259 ANAPC16Q96DE5 110 aa11.37□□□□□ -0.59
RAPGEF3-208ENST00000476259 LINC00526Q96FQ7 95 aa11.37□□□□□ -0.59
RAPGEF3-208ENST00000476259 HERC1Q15751 4861 aa11.37□□□□□ -0.59
RAPGEF3-208ENST00000476259 TRAV13-1A0A0B4J241 112 aa11.36□□□□□ -0.59
RAPGEF3-208ENST00000476259 KRTAP29-1A8MX34 341 aaPredicted RBP11.36□□□□□ -0.59
RAPGEF3-208ENST00000476259 CLLU1Q5K131 121 aa11.36□□□□□ -0.59
RAPGEF3-208ENST00000476259 IGKV2-24A0A0C4DH68 120 aa11.35□□□□□ -0.59
RAPGEF3-208ENST00000476259 ZNF561-AS1K7EIQ3 104 aa11.35□□□□□ -0.59
RAPGEF3-208ENST00000476259 TMEM136Q6ZRR5 245 aa11.35□□□□□ -0.59
RAPGEF3-208ENST00000476259 PRELID3AQ96N28 172 aa11.35□□□□□ -0.59
RAPGEF3-208ENST00000476259 COX7A2LO14548 114 aa11.34□□□□□ -0.59
RAPGEF3-208ENST00000476259 MALP21145 153 aa11.34□□□□□ -0.59
RAPGEF3-208ENST00000476259 CARD19Q96LW7 228 aa11.34□□□□□ -0.59
RAPGEF3-208ENST00000476259 PLAC8Q9NZF1 115 aa11.34□□□□□ -0.59
RAPGEF3-208ENST00000476259 MAJINQ3KP22 176 aa11.33□□□□□ -0.6
RAPGEF3-208ENST00000476259 SPANXA1Q9NS26 97 aa11.33□□□□□ -0.6
RAPGEF3-208ENST00000476259 A0A096LNI7 61 aa11.32□□□□□ -0.6
RAPGEF3-208ENST00000476259 HNRNPA3P51991 378 aaKnown RBP11.32□□□□□ -0.6
RAPGEF3-208ENST00000476259 SYCNQ0VAF6 134 aa11.32□□□□□ -0.6
RAPGEF3-208ENST00000476259 PKIGQ9Y2B9 76 aa11.32□□□□□ -0.6
RAPGEF3-208ENST00000476259 IGLV4-69A0A075B6H9 119 aa11.31□□□□□ -0.6
RAPGEF3-208ENST00000476259 RAB5AP20339 215 aa11.31□□□□□ -0.6
RAPGEF3-208ENST00000476259 C5orf38Q86SI9 138 aa11.31□□□□□ -0.6
RAPGEF3-208ENST00000476259 FAM104AQ969W3 186 aa11.31□□□□□ -0.6
RAPGEF3-208ENST00000476259 OPRPNQ99935 248 aaPredicted RBP11.31□□□□□ -0.6
RAPGEF3-208ENST00000476259 PKHD1L1Q86WI1 4243 aa11.3□□□□□ -0.6
RAPGEF3-208ENST00000476259 MRPS36P82909 103 aaKnown RBP11.3□□□□□ -0.6
RAPGEF3-208ENST00000476259 STPG4Q8N801 248 aa11.3□□□□□ -0.6
RAPGEF3-208ENST00000476259 LAMTOR2Q9Y2Q5 125 aa11.3□□□□□ -0.6
RAPGEF3-208ENST00000476259 IFITM2Q01629 132 aa11.29□□□□□ -0.6
RAPGEF3-208ENST00000476259 LOC389332A0A1B0GUA5 103 aa11.28□□□□□ -0.6
RAPGEF3-208ENST00000476259 PRSS47A8MTI9 375 aa11.28□□□□□ -0.6
RAPGEF3-208ENST00000476259 APOMO95445 188 aa11.28□□□□□ -0.6
RAPGEF3-208ENST00000476259 OXTP01178 125 aa11.28□□□□□ -0.6
RAPGEF3-208ENST00000476259 ADCYAP1P18509 176 aa11.28□□□□□ -0.6
RAPGEF3-208ENST00000476259 UQCC3Q6UW78 93 aa11.28□□□□□ -0.6
RAPGEF3-208ENST00000476259 C7orf33Q8WU49 177 aa11.28□□□□□ -0.6
RAPGEF3-208ENST00000476259 MAP1LC3AQ9H492 121 aa11.28□□□□□ -0.6
RAPGEF3-208ENST00000476259 LINC00474Q9P2X8 69 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms