RNA–Protein interactions for RNA: ENST00000475795.5

UBE4B-208, Transcript of ubiquitination factor E4B, humanhuman

TSL 5

Gene UBE4B, Length 871 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-208ENST00000475795 CHCHD10Q8WYQ3 142 aaPredicted RBP4.53□□□□□ -1.68
UBE4B-208ENST00000475795 MED9Q9NWA0 146 aa4.53□□□□□ -1.68
UBE4B-208ENST00000475795 GVQW2A0A096LPI5 108 aaPredicted RBP4.52□□□□□ -1.69
UBE4B-208ENST00000475795 IGKV2-24A0A0C4DH68 120 aa4.52□□□□□ -1.69
UBE4B-208ENST00000475795 H0Y8G0 127 aa4.52□□□□□ -1.69
UBE4B-208ENST00000475795 H7C423 109 aa4.52□□□□□ -1.69
UBE4B-208ENST00000475795 NCR2O95944 276 aa4.52□□□□□ -1.69
UBE4B-208ENST00000475795 APCSP02743 223 aa4.52□□□□□ -1.69
UBE4B-208ENST00000475795 BCL2P10415 239 aa4.52□□□□□ -1.69
UBE4B-208ENST00000475795 PRR3P79522 188 aaKnown RBP4.52□□□□□ -1.69
UBE4B-208ENST00000475795 AMMECR1LQ6DCA0 310 aa4.52□□□□□ -1.69
UBE4B-208ENST00000475795 EIF5AL1Q6IS14 154 aaKnown RBP4.52□□□□□ -1.69
UBE4B-208ENST00000475795 Q6ZNX1 250 aa4.52□□□□□ -1.69
UBE4B-208ENST00000475795 PRSS3P2Q8NHM4 247 aa4.52□□□□□ -1.69
UBE4B-208ENST00000475795 KRTAP3-1Q9BYR8 98 aa4.52□□□□□ -1.69
UBE4B-208ENST00000475795 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.51□□□□□ -1.69
UBE4B-208ENST00000475795 IGKV2-29A2NJV5 120 aaPredicted RBP4.51□□□□□ -1.69
UBE4B-208ENST00000475795 K7EN84 100 aa4.51□□□□□ -1.69
UBE4B-208ENST00000475795 FOXI1Q12951 378 aa4.51□□□□□ -1.69
UBE4B-208ENST00000475795 RNASEKQ6P5S7 137 aaKnown RBP4.51□□□□□ -1.69
UBE4B-208ENST00000475795 STPG4Q8N801 248 aa4.51□□□□□ -1.69
UBE4B-208ENST00000475795 GTSF1Q8WW33 167 aa4.51□□□□□ -1.69
UBE4B-208ENST00000475795 RPL39LQ96EH5 51 aaKnown RBP4.51□□□□□ -1.69
UBE4B-208ENST00000475795 LINC01600Q96MT4 127 aa4.51□□□□□ -1.69
UBE4B-208ENST00000475795 RPP21Q9H633 154 aaKnown RBP4.51□□□□□ -1.69
UBE4B-208ENST00000475795 A0A096LNI7 61 aa4.5□□□□□ -1.69
UBE4B-208ENST00000475795 SDHAF1A6NFY7 115 aa4.5□□□□□ -1.69
UBE4B-208ENST00000475795 FGF6P10767 208 aa4.5□□□□□ -1.69
UBE4B-208ENST00000475795 ZNF25P17030 456 aaPredicted RBP4.5□□□□□ -1.69
UBE4B-208ENST00000475795 TAGLN2P37802 199 aaKnown RBP4.5□□□□□ -1.69
UBE4B-208ENST00000475795 PTTG1IPP53801 180 aa4.5□□□□□ -1.69
UBE4B-208ENST00000475795 TEX261Q6UWH6 196 aa4.5□□□□□ -1.69
UBE4B-208ENST00000475795 SMIM15Q7Z3B0 74 aa4.5□□□□□ -1.69
UBE4B-208ENST00000475795 OR5A1Q8NGJ0 315 aa4.5□□□□□ -1.69
UBE4B-208ENST00000475795 RNASE7Q9H1E1 156 aaKnown RBP4.5□□□□□ -1.69
UBE4B-208ENST00000475795 LINC00474Q9P2X8 69 aa4.5□□□□□ -1.69
UBE4B-208ENST00000475795 PKIGQ9Y2B9 76 aa4.5□□□□□ -1.69
UBE4B-208ENST00000475795 IGHV1-58A0A0C4DH39 117 aa4.49□□□□□ -1.69
UBE4B-208ENST00000475795 I3L3M4 83 aa4.49□□□□□ -1.69
UBE4B-208ENST00000475795 FOXA3P55318 350 aaPredicted RBP4.49□□□□□ -1.69
UBE4B-208ENST00000475795 LYPD6BQ8NI32 183 aa4.49□□□□□ -1.69
UBE4B-208ENST00000475795 OCC1Q8TAD7 63 aa4.49□□□□□ -1.69
UBE4B-208ENST00000475795 KRTAP4-9Q9BYQ8 210 aa4.49□□□□□ -1.69
UBE4B-208ENST00000475795 RNF213Q63HN8 5207 aa4.49□□□□□ -1.69
UBE4B-208ENST00000475795 A0A0J9YXV3 536 aa4.48□□□□□ -1.69
UBE4B-208ENST00000475795 TRBV6-5A0A0K0K1A5 114 aa4.48□□□□□ -1.69
UBE4B-208ENST00000475795 LINC00959A0A1B0GUT2 108 aa4.48□□□□□ -1.69
UBE4B-208ENST00000475795 FAM231BA6NCW3 169 aa4.48□□□□□ -1.69
UBE4B-208ENST00000475795 F8WDY8 70 aa4.48□□□□□ -1.69
UBE4B-208ENST00000475795 CCL25O15444 150 aa4.48□□□□□ -1.69
UBE4B-208ENST00000475795 ESDP10768 282 aa4.48□□□□□ -1.69
UBE4B-208ENST00000475795 PMCHP20382 165 aa4.48□□□□□ -1.69
UBE4B-208ENST00000475795 XCL1P47992 114 aa4.48□□□□□ -1.69
UBE4B-208ENST00000475795 REG3GQ6UW15 175 aa4.48□□□□□ -1.69
UBE4B-208ENST00000475795 SPINK6Q6UWN8 80 aa4.48□□□□□ -1.69
UBE4B-208ENST00000475795 SLC51BQ86UW2 128 aa4.48□□□□□ -1.69
UBE4B-208ENST00000475795 LINC00526Q96FQ7 95 aa4.48□□□□□ -1.69
UBE4B-208ENST00000475795 TMEM101Q96IK0 257 aa4.48□□□□□ -1.69
UBE4B-208ENST00000475795 BTF3L4Q96K17 158 aa4.48□□□□□ -1.69
UBE4B-208ENST00000475795 CARD19Q96LW7 228 aa4.48□□□□□ -1.69
UBE4B-208ENST00000475795 GATCO43716 136 aaKnown RBP4.47□□□□□ -1.69
UBE4B-208ENST00000475795 TSHBP01222 138 aa4.47□□□□□ -1.69
UBE4B-208ENST00000475795 KRTAP10-8P60410 259 aa4.47□□□□□ -1.69
UBE4B-208ENST00000475795 Q6ZRP5 223 aa4.47□□□□□ -1.69
UBE4B-208ENST00000475795 FAM231DQ6ZW35 169 aa4.47□□□□□ -1.69
UBE4B-208ENST00000475795 MRAP2Q96G30 205 aa4.47□□□□□ -1.69
UBE4B-208ENST00000475795 KRTAP9-3Q9BYQ3 159 aa4.47□□□□□ -1.69
UBE4B-208ENST00000475795 VCX2Q9H322 139 aa4.47□□□□□ -1.69
UBE4B-208ENST00000475795 ST20Q9HBF5 79 aa4.47□□□□□ -1.69
UBE4B-208ENST00000475795 TMEM242Q9NWH2 141 aa4.47□□□□□ -1.69
UBE4B-208ENST00000475795 A8MWL6 223 aa4.46□□□□□ -1.7
UBE4B-208ENST00000475795 TMEM250H0YL14 139 aa4.46□□□□□ -1.7
UBE4B-208ENST00000475795 GAS8-AS1O95177 125 aa4.46□□□□□ -1.7
UBE4B-208ENST00000475795 SYCNQ0VAF6 134 aa4.46□□□□□ -1.7
UBE4B-208ENST00000475795 SRSF9Q13242 221 aaKnown RBP eCLIP4.46□□□□□ -1.7
UBE4B-208ENST00000475795 SS18Q15532 418 aa4.46□□□□□ -1.7
UBE4B-208ENST00000475795 CD164L2Q6UWJ8 174 aa4.46□□□□□ -1.7
UBE4B-208ENST00000475795 MRPL52Q86TS9 123 aaKnown RBP4.46□□□□□ -1.7
UBE4B-208ENST00000475795 TCTE3Q8IZS6 198 aa4.46□□□□□ -1.7
UBE4B-208ENST00000475795 CDC42SE2Q9NRR3 84 aa4.46□□□□□ -1.7
UBE4B-208ENST00000475795 TRBV27A0A0K0K1C4 114 aa4.45□□□□□ -1.7
UBE4B-208ENST00000475795 LOC107984640A0A0U1RRK4 108 aa4.45□□□□□ -1.7
UBE4B-208ENST00000475795 C7orf77A4D0Y5 90 aa4.45□□□□□ -1.7
UBE4B-208ENST00000475795 VPREB1P12018 145 aa4.45□□□□□ -1.7
UBE4B-208ENST00000475795 POLR2KP53803 58 aaKnown RBP4.45□□□□□ -1.7
UBE4B-208ENST00000475795 ZNF664Q8N3J9 261 aa4.45□□□□□ -1.7
UBE4B-208ENST00000475795 ISOC2Q96AB3 205 aa4.45□□□□□ -1.7
UBE4B-208ENST00000475795 BORCS7Q96B45 105 aa4.45□□□□□ -1.7
UBE4B-208ENST00000475795 TMEM191AQ9H0A3 160 aa4.45□□□□□ -1.7
UBE4B-208ENST00000475795 IGLV4-69A0A075B6H9 119 aa4.44□□□□□ -1.7
UBE4B-208ENST00000475795 A0A1B0GUT8 65 aa4.44□□□□□ -1.7
UBE4B-208ENST00000475795 C5orf52A6NGY3 159 aa4.44□□□□□ -1.7
UBE4B-208ENST00000475795 S100A6P06703 90 aa4.44□□□□□ -1.7
UBE4B-208ENST00000475795 RAB4AP20338 218 aa4.44□□□□□ -1.7
UBE4B-208ENST00000475795 GAGE2BQ13066 116 aa4.44□□□□□ -1.7
UBE4B-208ENST00000475795 LCE5AQ5TCM9 118 aa4.44□□□□□ -1.7
UBE4B-208ENST00000475795 TSKUQ8WUA8 353 aa4.44□□□□□ -1.7
UBE4B-208ENST00000475795 A0A1W2PNN7 141 aa4.43□□□□□ -1.7
UBE4B-208ENST00000475795 HIGD1CA8MV81 97 aa4.43□□□□□ -1.7
UBE4B-208ENST00000475795 C1orf196B1AJZ1 125 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms