RNA–Protein interactions for RNA: ENST00000475288.5

PCGF3-209, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-209ENST00000475288 LYZL1Q6UWQ5 148 aa11.14□□□□□ -0.63
PCGF3-209ENST00000475288 CHCHD10Q8WYQ3 142 aaPredicted RBP11.14□□□□□ -0.63
PCGF3-209ENST00000475288 K7EN84 100 aa11.13□□□□□ -0.63
PCGF3-209ENST00000475288 HIGD2BQ4VC39 106 aa11.13□□□□□ -0.63
PCGF3-209ENST00000475288 REG3GQ6UW15 175 aa11.13□□□□□ -0.63
PCGF3-209ENST00000475288 FAM231DQ6ZW35 169 aa11.13□□□□□ -0.63
PCGF3-209ENST00000475288 ISOC2Q96AB3 205 aa11.13□□□□□ -0.63
PCGF3-209ENST00000475288 ADIRFQ15847 76 aa11.12□□□□□ -0.63
PCGF3-209ENST00000475288 A0A096LNI7 61 aa11.11□□□□□ -0.63
PCGF3-209ENST00000475288 GATD1Q8NB37 220 aa11.11□□□□□ -0.63
PCGF3-209ENST00000475288 OSTCQ9NRP0 149 aa11.11□□□□□ -0.63
PCGF3-209ENST00000475288 TMEM242Q9NWH2 141 aa11.11□□□□□ -0.63
PCGF3-209ENST00000475288 ZNF25P17030 456 aaPredicted RBP11.1□□□□□ -0.63
PCGF3-209ENST00000475288 FOXI1Q12951 378 aa11.1□□□□□ -0.63
PCGF3-209ENST00000475288 SRSF9Q13242 221 aaKnown RBP eCLIP11.1□□□□□ -0.63
PCGF3-209ENST00000475288 AMMECR1LQ6DCA0 310 aa11.1□□□□□ -0.63
PCGF3-209ENST00000475288 IGKV3OR2-268A0A0C4DH90 116 aa11.09□□□□□ -0.63
PCGF3-209ENST00000475288 PPP1R2P9O14990 202 aa11.09□□□□□ -0.63
PCGF3-209ENST00000475288 MT-ND4LP03901 98 aa11.09□□□□□ -0.63
PCGF3-209ENST00000475288 CT83Q5H943 113 aa11.09□□□□□ -0.63
PCGF3-209ENST00000475288 ANAPC16Q96DE5 110 aa11.09□□□□□ -0.63
PCGF3-209ENST00000475288 CTDSP1Q9GZU7 261 aa11.09□□□□□ -0.63
PCGF3-209ENST00000475288 C7orf77A4D0Y5 90 aa11.08□□□□□ -0.64
PCGF3-209ENST00000475288 TWIST1Q15672 202 aa11.08□□□□□ -0.64
PCGF3-209ENST00000475288 Q6ZRP5 223 aa11.08□□□□□ -0.64
PCGF3-209ENST00000475288 OR5A1Q8NGJ0 315 aa11.08□□□□□ -0.64
PCGF3-209ENST00000475288 IGHV1-58A0A0C4DH39 117 aa11.07□□□□□ -0.64
PCGF3-209ENST00000475288 APCSP02743 223 aa11.07□□□□□ -0.64
PCGF3-209ENST00000475288 FGF6P10767 208 aa11.07□□□□□ -0.64
PCGF3-209ENST00000475288 RNASEKQ6P5S7 137 aaKnown RBP11.07□□□□□ -0.64
PCGF3-209ENST00000475288 ODF1Q14990 250 aa11.06□□□□□ -0.64
PCGF3-209ENST00000475288 NUDT10Q8NFP7 164 aa11.06□□□□□ -0.64
PCGF3-209ENST00000475288 NUDT11Q96G61 164 aa11.06□□□□□ -0.64
PCGF3-209ENST00000475288 CARD19Q96LW7 228 aa11.06□□□□□ -0.64
PCGF3-209ENST00000475288 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.05□□□□□ -0.64
PCGF3-209ENST00000475288 TRAV26-2A0A0B4J265 109 aa11.05□□□□□ -0.64
PCGF3-209ENST00000475288 IGKV2-29A2NJV5 120 aaPredicted RBP11.05□□□□□ -0.64
PCGF3-209ENST00000475288 V9GYV3 84 aa11.05□□□□□ -0.64
PCGF3-209ENST00000475288 FAM231BA6NCW3 169 aa11.04□□□□□ -0.64
PCGF3-209ENST00000475288 SDHAF1A6NFY7 115 aa11.04□□□□□ -0.64
PCGF3-209ENST00000475288 SMIM15Q7Z3B0 74 aa11.04□□□□□ -0.64
PCGF3-209ENST00000475288 RPL39LQ96EH5 51 aaKnown RBP11.04□□□□□ -0.64
PCGF3-209ENST00000475288 IMMP2LQ96T52 175 aa11.04□□□□□ -0.64
PCGF3-209ENST00000475288 RNASE7Q9H1E1 156 aaKnown RBP11.04□□□□□ -0.64
PCGF3-209ENST00000475288 RPP21Q9H633 154 aaKnown RBP11.04□□□□□ -0.64
PCGF3-209ENST00000475288 LINC00959A0A1B0GUT2 108 aa11.03□□□□□ -0.64
PCGF3-209ENST00000475288 GATCO43716 136 aaKnown RBP11.03□□□□□ -0.64
PCGF3-209ENST00000475288 XCL1P47992 114 aa11.03□□□□□ -0.64
PCGF3-209ENST00000475288 BTF3L4Q96K17 158 aa11.03□□□□□ -0.64
PCGF3-209ENST00000475288 RPS10P5Q9NQ39 176 aa11.03□□□□□ -0.64
PCGF3-209ENST00000475288 TRBV6-5A0A0K0K1A5 114 aa11.02□□□□□ -0.65
PCGF3-209ENST00000475288 I3L3M4 83 aa11.02□□□□□ -0.65
PCGF3-209ENST00000475288 CCL25O15444 150 aa11.02□□□□□ -0.65
PCGF3-209ENST00000475288 ESDP10768 282 aa11.02□□□□□ -0.65
PCGF3-209ENST00000475288 TMEM101Q96IK0 257 aa11.02□□□□□ -0.65
PCGF3-209ENST00000475288 A8MWL6 223 aa11.01□□□□□ -0.65
PCGF3-209ENST00000475288 TSKUQ8WUA8 353 aa11.01□□□□□ -0.65
PCGF3-209ENST00000475288 TRAV9-1A0A075B6T8 112 aa11□□□□□ -0.65
PCGF3-209ENST00000475288 PTTG1IPP53801 180 aa11□□□□□ -0.65
PCGF3-209ENST00000475288 SYCNQ0VAF6 134 aa11□□□□□ -0.65
PCGF3-209ENST00000475288 CD164L2Q6UWJ8 174 aa11□□□□□ -0.65
PCGF3-209ENST00000475288 MRPL52Q86TS9 123 aaKnown RBP11□□□□□ -0.65
PCGF3-209ENST00000475288 SMCO4Q9NRQ5 59 aa11□□□□□ -0.65
PCGF3-209ENST00000475288 SMIM27A0A1W2PRY6 76 aa10.99□□□□□ -0.65
PCGF3-209ENST00000475288 ZNF561-AS1K7EIQ3 104 aa10.99□□□□□ -0.65
PCGF3-209ENST00000475288 FOXA3P55318 350 aaPredicted RBP10.99□□□□□ -0.65
PCGF3-209ENST00000475288 SS18Q15532 418 aa10.99□□□□□ -0.65
PCGF3-209ENST00000475288 LOC107984640A0A0U1RRK4 108 aa10.98□□□□□ -0.65
PCGF3-209ENST00000475288 PMCHP20382 165 aa10.98□□□□□ -0.65
PCGF3-209ENST00000475288 LINC00526Q96FQ7 95 aa10.98□□□□□ -0.65
PCGF3-209ENST00000475288 MRAP2Q96G30 205 aa10.98□□□□□ -0.65
PCGF3-209ENST00000475288 CDC42SE2Q9NRR3 84 aa10.98□□□□□ -0.65
PCGF3-209ENST00000475288 TSHBP01222 138 aa10.97□□□□□ -0.65
PCGF3-209ENST00000475288 CAMPP49913 170 aa10.97□□□□□ -0.65
PCGF3-209ENST00000475288 S100PP25815 95 aa10.96□□□□□ -0.65
PCGF3-209ENST00000475288 YPEL4Q96NS1 127 aa10.96□□□□□ -0.65
PCGF3-209ENST00000475288 NAT8BQ9UHF3 227 aa10.96□□□□□ -0.65
PCGF3-209ENST00000475288 TRBV24-1A0A075B6N3 115 aa10.95□□□□□ -0.66
PCGF3-209ENST00000475288 GAS8-AS1O95177 125 aa10.95□□□□□ -0.66
PCGF3-209ENST00000475288 CBLN2Q8IUK8 224 aa10.95□□□□□ -0.66
PCGF3-209ENST00000475288 ZNF664Q8N3J9 261 aa10.95□□□□□ -0.66
PCGF3-209ENST00000475288 ST20Q9HBF5 79 aa10.95□□□□□ -0.66
PCGF3-209ENST00000475288 LPAP08519 4548 aa10.94□□□□□ -0.66
PCGF3-209ENST00000475288 IGLV4-69A0A075B6H9 119 aa10.94□□□□□ -0.66
PCGF3-209ENST00000475288 TRBV27A0A0K0K1C4 114 aa10.94□□□□□ -0.66
PCGF3-209ENST00000475288 HIGD1CA8MV81 97 aa10.94□□□□□ -0.66
PCGF3-209ENST00000475288 POLR2KP53803 58 aaKnown RBP10.94□□□□□ -0.66
PCGF3-209ENST00000475288 NUP35Q8NFH5 326 aa10.94□□□□□ -0.66
PCGF3-209ENST00000475288 A0A1W2PNN7 141 aa10.93□□□□□ -0.66
PCGF3-209ENST00000475288 C1orf196B1AJZ1 125 aa10.93□□□□□ -0.66
PCGF3-209ENST00000475288 SCO1O75880 301 aa10.93□□□□□ -0.66
PCGF3-209ENST00000475288 GAGE2BQ13066 116 aa10.93□□□□□ -0.66
PCGF3-209ENST00000475288 ATP5L2Q7Z4Y8 100 aa10.93□□□□□ -0.66
PCGF3-209ENST00000475288 CSDC2Q9Y534 153 aaKnown RBP10.93□□□□□ -0.66
PCGF3-209ENST00000475288 APOMO95445 188 aa10.92□□□□□ -0.66
PCGF3-209ENST00000475288 C2orf48Q96LS8 159 aa10.92□□□□□ -0.66
PCGF3-209ENST00000475288 PSORS1C2Q9UIG4 136 aa10.92□□□□□ -0.66
PCGF3-209ENST00000475288 A0A1B0GW15 77 aa10.91□□□□□ -0.66
PCGF3-209ENST00000475288 COX7A2LO14548 114 aa10.91□□□□□ -0.66
PCGF3-209ENST00000475288 MALP21145 153 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms