RNA–Protein interactions for RNA: ENST00000474455.1

SMIM11A-204, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best)

Gene SMIM11A, Length 1,857 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-204ENST00000474455 XCL2Q9UBD3 114 aa15.02■□□□□ -0
SMIM11A-204ENST00000474455 CDIP1Q9H305 208 aa15.01□□□□□ -0.01
SMIM11A-204ENST00000474455 NBEAL2Q6ZNJ1 2754 aa15.01□□□□□ -0.01
SMIM11A-204ENST00000474455 A8MWV9 139 aa15.01□□□□□ -0.01
SMIM11A-204ENST00000474455 PRM2P04554 102 aa15.01□□□□□ -0.01
SMIM11A-204ENST00000474455 TSPEAR-AS2P59090 65 aa15.01□□□□□ -0.01
SMIM11A-204ENST00000474455 RPL39P62891 51 aaKnown RBP15.01□□□□□ -0.01
SMIM11A-204ENST00000474455 ZNRF2Q8NHG8 242 aa15.01□□□□□ -0.01
SMIM11A-204ENST00000474455 IGHV3-16A0A0C4DH30 117 aa15□□□□□ -0.01
SMIM11A-204ENST00000474455 TCL1BO95988 128 aa15□□□□□ -0.01
SMIM11A-204ENST00000474455 KRTAP21-3Q3LHN1 58 aa15□□□□□ -0.01
SMIM11A-204ENST00000474455 A0A087WWL8 130 aa14.99□□□□□ -0.01
SMIM11A-204ENST00000474455 CRYBA4P53673 196 aa14.99□□□□□ -0.01
SMIM11A-204ENST00000474455 CLUHP3Q96NS8 147 aa14.99□□□□□ -0.01
SMIM11A-204ENST00000474455 TMEM223A0PJW6 202 aa14.99□□□□□ -0.01
SMIM11A-204ENST00000474455 CKS1BP61024 79 aa14.99□□□□□ -0.01
SMIM11A-204ENST00000474455 JPT2Q9H910 190 aa14.99□□□□□ -0.01
SMIM11A-204ENST00000474455 MDFICQ9P1T7 246 aa14.99□□□□□ -0.01
SMIM11A-204ENST00000474455 MUC4Q99102 2169 aa14.98□□□□□ -0.01
SMIM11A-204ENST00000474455 M0QY20 66 aa14.98□□□□□ -0.01
SMIM11A-204ENST00000474455 EMP1P54849 157 aa14.98□□□□□ -0.01
SMIM11A-204ENST00000474455 IGHV4-30-4P0DP06 118 aa14.97□□□□□ -0.01
SMIM11A-204ENST00000474455 A0A0B4J2C4 111 aa14.97□□□□□ -0.01
SMIM11A-204ENST00000474455 CARD19Q96LW7 228 aa14.96□□□□□ -0.01
SMIM11A-204ENST00000474455 TMEM262E9PQX1 116 aa14.95□□□□□ -0.02
SMIM11A-204ENST00000474455 SCGB1C2P0DMR2 95 aa14.95□□□□□ -0.02
SMIM11A-204ENST00000474455 P0DMU3 169 aa14.95□□□□□ -0.02
SMIM11A-204ENST00000474455 FAM231AP0DMU4 169 aa14.95□□□□□ -0.02
SMIM11A-204ENST00000474455 FAM231CP0DMU5 169 aa14.95□□□□□ -0.02
SMIM11A-204ENST00000474455 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.95□□□□□ -0.02
SMIM11A-204ENST00000474455 I3L3M4 83 aa14.95□□□□□ -0.02
SMIM11A-204ENST00000474455 HTN1P15515 57 aa14.95□□□□□ -0.02
SMIM11A-204ENST00000474455 ZNF56Q15929 161 aa14.95□□□□□ -0.02
SMIM11A-204ENST00000474455 C1orf158Q8N1D5 194 aa14.95□□□□□ -0.02
SMIM11A-204ENST00000474455 C20orf203Q8NBC4 194 aa14.95□□□□□ -0.02
SMIM11A-204ENST00000474455 SPINK8P0C7L1 97 aa14.94□□□□□ -0.02
SMIM11A-204ENST00000474455 IGHV3OR16-12A0A075B7B8 117 aa14.93□□□□□ -0.02
SMIM11A-204ENST00000474455 IGHV1OR15-1A0A075B7D0 117 aa14.93□□□□□ -0.02
SMIM11A-204ENST00000474455 Q6ZUT4 128 aa14.93□□□□□ -0.02
SMIM11A-204ENST00000474455 EDA2RQ9HAV5 297 aa14.93□□□□□ -0.02
SMIM11A-204ENST00000474455 RHODO00212 210 aa14.93□□□□□ -0.02
SMIM11A-204ENST00000474455 IGHV3-33P01772 117 aa14.93□□□□□ -0.02
SMIM11A-204ENST00000474455 SFTA2Q6UW10 78 aa14.93□□□□□ -0.02
SMIM11A-204ENST00000474455 CSNK1G2-AS1Q8NCQ2 148 aa14.93□□□□□ -0.02
SMIM11A-204ENST00000474455 TMEM263Q8WUH6 116 aaKnown RBP14.93□□□□□ -0.02
SMIM11A-204ENST00000474455 FAM74A4Q5TZK3 123 aa14.92□□□□□ -0.02
SMIM11A-204ENST00000474455 LINC01600Q96MT4 127 aa14.92□□□□□ -0.02
SMIM11A-204ENST00000474455 ERG28Q9UKR5 140 aa14.92□□□□□ -0.02
SMIM11A-204ENST00000474455 A4D1N5 150 aa14.91□□□□□ -0.02
SMIM11A-204ENST00000474455 INSP01308 110 aa14.91□□□□□ -0.02
SMIM11A-204ENST00000474455 ZNF22P17026 224 aaPredicted RBP14.91□□□□□ -0.02
SMIM11A-204ENST00000474455 TRGV11A0A075B6L2 103 aa14.91□□□□□ -0.02
SMIM11A-204ENST00000474455 PTH2Q96A98 100 aa14.91□□□□□ -0.02
SMIM11A-204ENST00000474455 LINC01587Q99440 93 aa14.91□□□□□ -0.02
SMIM11A-204ENST00000474455 PYGO1Q9Y3Y4 419 aa14.91□□□□□ -0.02
SMIM11A-204ENST00000474455 M0R2P5 195 aa14.9□□□□□ -0.02
SMIM11A-204ENST00000474455 ANKRD29Q8N6D5 301 aa14.9□□□□□ -0.02
SMIM11A-204ENST00000474455 IGLV4-3A0A075B6K6 122 aa14.89□□□□□ -0.03
SMIM11A-204ENST00000474455 SLC25A20O43772 301 aa14.89□□□□□ -0.03
SMIM11A-204ENST00000474455 KPRPQ5T749 579 aaPredicted RBP14.89□□□□□ -0.03
SMIM11A-204ENST00000474455 GEMIN7Q9H840 131 aaKnown RBP14.89□□□□□ -0.03
SMIM11A-204ENST00000474455 MT-ATP8P03928 68 aa14.88□□□□□ -0.03
SMIM11A-204ENST00000474455 XGP55808 180 aa14.88□□□□□ -0.03
SMIM11A-204ENST00000474455 MUSTN1Q8IVN3 82 aa14.87□□□□□ -0.03
SMIM11A-204ENST00000474455 K7EIL1 84 aa14.86□□□□□ -0.03
SMIM11A-204ENST00000474455 ATXN8Q156A1 80 aa14.86□□□□□ -0.03
SMIM11A-204ENST00000474455 DEFB135Q30KP9 77 aa14.86□□□□□ -0.03
SMIM11A-204ENST00000474455 OPRPNQ99935 248 aaPredicted RBP14.85□□□□□ -0.03
SMIM11A-204ENST00000474455 A0A0J9YXV3 536 aa14.84□□□□□ -0.03
SMIM11A-204ENST00000474455 A0A0J9YXY3 114 aa14.84□□□□□ -0.03
SMIM11A-204ENST00000474455 DEFB104AQ8WTQ1 72 aa14.84□□□□□ -0.03
SMIM11A-204ENST00000474455 EIF4EBP3O60516 100 aaPredicted RBP14.84□□□□□ -0.03
SMIM11A-204ENST00000474455 MRPS36P82909 103 aaKnown RBP14.84□□□□□ -0.03
SMIM11A-204ENST00000474455 KIR2DL5BQ8NHK3 375 aa14.84□□□□□ -0.03
SMIM11A-204ENST00000474455 TRBV30A0A0K0K1B3 111 aa14.83□□□□□ -0.04
SMIM11A-204ENST00000474455 C9JAW5 83 aa14.83□□□□□ -0.04
SMIM11A-204ENST00000474455 APOC4P55056 127 aa14.83□□□□□ -0.04
SMIM11A-204ENST00000474455 HUWE1Q7Z6Z7 4374 aaKnown RBP14.83□□□□□ -0.04
SMIM11A-204ENST00000474455 A8MZ25 164 aa14.82□□□□□ -0.04
SMIM11A-204ENST00000474455 TIMM21Q9BVV7 248 aa14.82□□□□□ -0.04
SMIM11A-204ENST00000474455 PIK3CD-AS1Q5SR53 167 aa14.82□□□□□ -0.04
SMIM11A-204ENST00000474455 RNF183Q96D59 192 aa14.82□□□□□ -0.04
SMIM11A-204ENST00000474455 SPANXDQ9BXN6 97 aa14.82□□□□□ -0.04
SMIM11A-204ENST00000474455 SPANXCQ9NY87 97 aa14.82□□□□□ -0.04
SMIM11A-204ENST00000474455 DNAH9Q9NYC9 4486 aa14.8□□□□□ -0.04
SMIM11A-204ENST00000474455 NACAE9PAV3 2078 aa14.8□□□□□ -0.04
SMIM11A-204ENST00000474455 IGHV3-30-3P0DP02 117 aa14.8□□□□□ -0.04
SMIM11A-204ENST00000474455 LINC01620Q4KN68 170 aa14.8□□□□□ -0.04
SMIM11A-204ENST00000474455 DEFB121Q5J5C9 76 aa14.8□□□□□ -0.04
SMIM11A-204ENST00000474455 C11orf72Q8NBR9 251 aa14.8□□□□□ -0.04
SMIM11A-204ENST00000474455 RPL13AP40429 203 aaKnown RBP14.8□□□□□ -0.04
SMIM11A-204ENST00000474455 Q1RN00 199 aa14.8□□□□□ -0.04
SMIM11A-204ENST00000474455 LINC00467Q9BRT7 94 aa14.8□□□□□ -0.04
SMIM11A-204ENST00000474455 IGHV1-58A0A0C4DH39 117 aa14.79□□□□□ -0.04
SMIM11A-204ENST00000474455 ZFAND6Q6FIF0 208 aa14.79□□□□□ -0.04
SMIM11A-204ENST00000474455 RETNQ9HD89 108 aa14.79□□□□□ -0.04
SMIM11A-204ENST00000474455 X6R8D5 127 aa14.79□□□□□ -0.04
SMIM11A-204ENST00000474455 TENM3Q9P273 2699 aa14.79□□□□□ -0.04
SMIM11A-204ENST00000474455 LITAFQ99732 161 aa14.78□□□□□ -0.04
SMIM11A-204ENST00000474455 SPANXA1Q9NS26 97 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms