RNA–Protein interactions for RNA: ENST00000474412.1

VPS50-211, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-211ENST00000474412 IGLV10-54A0A075B6I4 117 aa4.49□□□□□ -1.69
VPS50-211ENST00000474412 TMEM262E9PQX1 116 aa4.49□□□□□ -1.69
VPS50-211ENST00000474412 CRPP02741 224 aa4.49□□□□□ -1.69
VPS50-211ENST00000474412 INAFM2P0DMQ5 153 aa4.49□□□□□ -1.69
VPS50-211ENST00000474412 NTF3P20783 257 aa4.49□□□□□ -1.69
VPS50-211ENST00000474412 CEBPGP53567 150 aa4.49□□□□□ -1.69
VPS50-211ENST00000474412 RPS20P60866 119 aaKnown RBP4.49□□□□□ -1.69
VPS50-211ENST00000474412 LCE1FQ5T754 118 aa4.49□□□□□ -1.69
VPS50-211ENST00000474412 C20orf203Q8NBC4 194 aa4.49□□□□□ -1.69
VPS50-211ENST00000474412 CHCHD7Q9BUK0 85 aa4.49□□□□□ -1.69
VPS50-211ENST00000474412 DPH3P1Q9H4G8 78 aa4.49□□□□□ -1.69
VPS50-211ENST00000474412 MYCBP2O75592 4640 aa4.49□□□□□ -1.69
VPS50-211ENST00000474412 TRBV25-1A0A075B6N4 114 aa4.48□□□□□ -1.69
VPS50-211ENST00000474412 PANO1I0J062 215 aa4.48□□□□□ -1.69
VPS50-211ENST00000474412 KRTAP10-5P60370 271 aa4.48□□□□□ -1.69
VPS50-211ENST00000474412 CACNG7P62955 275 aa4.48□□□□□ -1.69
VPS50-211ENST00000474412 IQCJQ1A5X6 159 aa4.48□□□□□ -1.69
VPS50-211ENST00000474412 RASL11AQ6T310 242 aa4.48□□□□□ -1.69
VPS50-211ENST00000474412 LINC00269Q8N2A0 174 aa4.48□□□□□ -1.69
VPS50-211ENST00000474412 GATD1Q8NB37 220 aa4.48□□□□□ -1.69
VPS50-211ENST00000474412 LYPD6BQ8NI32 183 aa4.48□□□□□ -1.69
VPS50-211ENST00000474412 RMI2Q96E14 147 aa4.48□□□□□ -1.69
VPS50-211ENST00000474412 CNFNQ9BYD5 112 aa4.48□□□□□ -1.69
VPS50-211ENST00000474412 IGHV1-24A0A0C4DH33 117 aa4.47□□□□□ -1.69
VPS50-211ENST00000474412 TRGC1P0CF51 173 aa4.47□□□□□ -1.69
VPS50-211ENST00000474412 KRTAP10-4P60372 401 aaPredicted RBP4.47□□□□□ -1.69
VPS50-211ENST00000474412 KCNIP4Q6PIL6 250 aa4.47□□□□□ -1.69
VPS50-211ENST00000474412 PGLYRP4Q96LB8 373 aa4.47□□□□□ -1.69
VPS50-211ENST00000474412 PRR34Q9NV39 138 aa4.47□□□□□ -1.69
VPS50-211ENST00000474412 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.46□□□□□ -1.7
VPS50-211ENST00000474412 IGKV2-29A2NJV5 120 aaPredicted RBP4.46□□□□□ -1.7
VPS50-211ENST00000474412 C9JQL5 133 aa4.46□□□□□ -1.7
VPS50-211ENST00000474412 F2Z2F3 143 aa4.46□□□□□ -1.7
VPS50-211ENST00000474412 TMEM250H0YL14 139 aa4.46□□□□□ -1.7
VPS50-211ENST00000474412 GATCO43716 136 aaKnown RBP4.46□□□□□ -1.7
VPS50-211ENST00000474412 SRP19P09132 144 aaKnown RBP4.46□□□□□ -1.7
VPS50-211ENST00000474412 KRTAP10-12P60413 245 aa4.46□□□□□ -1.7
VPS50-211ENST00000474412 REG3AQ06141 175 aa4.46□□□□□ -1.7
VPS50-211ENST00000474412 Q0VG73 95 aa4.46□□□□□ -1.7
VPS50-211ENST00000474412 ELOBQ15370 118 aa4.46□□□□□ -1.7
VPS50-211ENST00000474412 MIAQ16674 131 aa4.46□□□□□ -1.7
VPS50-211ENST00000474412 LINC01551Q86U37 167 aa4.46□□□□□ -1.7
VPS50-211ENST00000474412 CIRBP-AS1Q8TBR5 109 aa4.46□□□□□ -1.7
VPS50-211ENST00000474412 FAM210AQ96ND0 272 aa4.46□□□□□ -1.7
VPS50-211ENST00000474412 SMIM7Q9BQ49 75 aa4.46□□□□□ -1.7
VPS50-211ENST00000474412 TMEM243Q9BU79 118 aa4.46□□□□□ -1.7
VPS50-211ENST00000474412 NIT2Q9NQR4 276 aa4.46□□□□□ -1.7
VPS50-211ENST00000474412 PKHD1L1Q86WI1 4243 aa4.45□□□□□ -1.7
VPS50-211ENST00000474412 IGKV3OR2-268A0A0C4DH90 116 aa4.45□□□□□ -1.7
VPS50-211ENST00000474412 XKRY2A2RUG3 117 aa4.45□□□□□ -1.7
VPS50-211ENST00000474412 H7C1H1 209 aa4.45□□□□□ -1.7
VPS50-211ENST00000474412 NCR2O95944 276 aa4.45□□□□□ -1.7
VPS50-211ENST00000474412 TAGLN2P37802 199 aaKnown RBP4.45□□□□□ -1.7
VPS50-211ENST00000474412 RPS10P46783 165 aaKnown RBP4.45□□□□□ -1.7
VPS50-211ENST00000474412 FAM231DQ6ZW35 169 aa4.45□□□□□ -1.7
VPS50-211ENST00000474412 OPRPNQ99935 248 aaPredicted RBP4.45□□□□□ -1.7
VPS50-211ENST00000474412 BIN3Q9NQY0 253 aa4.45□□□□□ -1.7
VPS50-211ENST00000474412 ZNF727A8MUV8 499 aa4.44□□□□□ -1.7
VPS50-211ENST00000474412 SMKR1H3BMG3 65 aa4.44□□□□□ -1.7
VPS50-211ENST00000474412 HNRNPA3P51991 378 aaKnown RBP4.44□□□□□ -1.7
VPS50-211ENST00000474412 COTL1Q14019 142 aa4.44□□□□□ -1.7
VPS50-211ENST00000474412 TMEM97Q5BJF2 176 aa4.44□□□□□ -1.7
VPS50-211ENST00000474412 C15orf56Q8N910 161 aa4.44□□□□□ -1.7
VPS50-211ENST00000474412 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.44□□□□□ -1.7
VPS50-211ENST00000474412 RNF185Q96GF1 192 aa4.44□□□□□ -1.7
VPS50-211ENST00000474412 EIF5A2Q9GZV4 153 aaKnown RBP4.44□□□□□ -1.7
VPS50-211ENST00000474412 TMEM242Q9NWH2 141 aa4.44□□□□□ -1.7
VPS50-211ENST00000474412 V9GYV3 84 aa4.44□□□□□ -1.7
VPS50-211ENST00000474412 A0A087X002 238 aa4.43□□□□□ -1.7
VPS50-211ENST00000474412 FAM231BA6NCW3 169 aa4.43□□□□□ -1.7
VPS50-211ENST00000474412 SDHAF1A6NFY7 115 aa4.43□□□□□ -1.7
VPS50-211ENST00000474412 HIGD1CA8MV81 97 aa4.43□□□□□ -1.7
VPS50-211ENST00000474412 CHTF8P0CG12 524 aa4.43□□□□□ -1.7
VPS50-211ENST00000474412 RPL23P62829 140 aaKnown RBP4.43□□□□□ -1.7
VPS50-211ENST00000474412 AMN1Q8IY45 258 aa4.43□□□□□ -1.7
VPS50-211ENST00000474412 ISOC2Q96AB3 205 aa4.43□□□□□ -1.7
VPS50-211ENST00000474412 CHAC1Q9BUX1 264 aa4.43□□□□□ -1.7
VPS50-211ENST00000474412 DMBT1Q9UGM3 2413 aaPredicted RBP4.43□□□□□ -1.7
VPS50-211ENST00000474412 SRRM2Q9UQ35 2752 aaKnown RBP4.42□□□□□ -1.7
VPS50-211ENST00000474412 LRP1Q07954 4544 aaKnown RBP4.42□□□□□ -1.7
VPS50-211ENST00000474412 IGLV9-49A0A0B4J1Y8 123 aa4.42□□□□□ -1.7
VPS50-211ENST00000474412 NDUFAF8A1L188 74 aa4.42□□□□□ -1.7
VPS50-211ENST00000474412 A8MWL6 223 aa4.42□□□□□ -1.7
VPS50-211ENST00000474412 UBE2L6O14933 153 aa4.42□□□□□ -1.7
VPS50-211ENST00000474412 APCSP02743 223 aa4.42□□□□□ -1.7
VPS50-211ENST00000474412 PKIAP61925 76 aa4.42□□□□□ -1.7
VPS50-211ENST00000474412 ADIRFQ15847 76 aa4.42□□□□□ -1.7
VPS50-211ENST00000474412 HIGD2BQ4VC39 106 aa4.42□□□□□ -1.7
VPS50-211ENST00000474412 C9orf163Q8N9P6 203 aa4.42□□□□□ -1.7
VPS50-211ENST00000474412 TSKUQ8WUA8 353 aa4.42□□□□□ -1.7
VPS50-211ENST00000474412 PYGO1Q9Y3Y4 419 aa4.42□□□□□ -1.7
VPS50-211ENST00000474412 HERC1Q15751 4861 aa4.42□□□□□ -1.7
VPS50-211ENST00000474412 A0A1B0GUT8 65 aa4.41□□□□□ -1.7
VPS50-211ENST00000474412 FGF6P10767 208 aa4.41□□□□□ -1.7
VPS50-211ENST00000474412 VPREB1P12018 145 aa4.41□□□□□ -1.7
VPS50-211ENST00000474412 RNASE13Q5GAN3 156 aaKnown RBP4.41□□□□□ -1.7
VPS50-211ENST00000474412 ADAMTSL4-AS1Q5T5F5 129 aa4.41□□□□□ -1.7
VPS50-211ENST00000474412 RNASEKQ6P5S7 137 aaKnown RBP4.41□□□□□ -1.7
VPS50-211ENST00000474412 NUP35Q8NFH5 326 aa4.41□□□□□ -1.7
VPS50-211ENST00000474412 LINC00526Q96FQ7 95 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms