RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 IGHV1OR15-1A0A075B7D0 117 aa10.75□□□□□ -0.69
LMNA-213ENST00000473598 TRBV7-7A0A0K0K1E9 115 aa10.75□□□□□ -0.69
LMNA-213ENST00000473598 RPL35AP18077 110 aaKnown RBP10.75□□□□□ -0.69
LMNA-213ENST00000473598 Q8N8P6 123 aa10.75□□□□□ -0.69
LMNA-213ENST00000473598 XCL2Q9UBD3 114 aa10.75□□□□□ -0.69
LMNA-213ENST00000473598 C9JAW5 83 aa10.74□□□□□ -0.69
LMNA-213ENST00000473598 H7C1H1 209 aa10.74□□□□□ -0.69
LMNA-213ENST00000473598 F8VRH5 84 aa10.73□□□□□ -0.69
LMNA-213ENST00000473598 GAS8-AS1O95177 125 aa10.73□□□□□ -0.69
LMNA-213ENST00000473598 GIG44P09565 113 aaPredicted RBP10.73□□□□□ -0.69
LMNA-213ENST00000473598 MED14OSP0DP75 135 aa10.73□□□□□ -0.69
LMNA-213ENST00000473598 RNASE3P12724 160 aaKnown RBP10.73□□□□□ -0.69
LMNA-213ENST00000473598 S100A4P26447 101 aaKnown RBP10.73□□□□□ -0.69
LMNA-213ENST00000473598 EGFEM1PQ0D2K5 195 aa10.73□□□□□ -0.69
LMNA-213ENST00000473598 SPANXN1Q5VSR9 72 aa10.73□□□□□ -0.69
LMNA-213ENST00000473598 FAM19A5Q7Z5A7 132 aaPredicted RBP10.73□□□□□ -0.69
LMNA-213ENST00000473598 FAM240AA0A1B0GVK7 77 aa10.72□□□□□ -0.69
LMNA-213ENST00000473598 TNFRSF6BO95407 300 aa10.72□□□□□ -0.69
LMNA-213ENST00000473598 PRB2P02812 416 aaPredicted RBP10.72□□□□□ -0.69
LMNA-213ENST00000473598 C10orf126Q8N4M7 172 aa10.72□□□□□ -0.69
LMNA-213ENST00000473598 SRSF9Q13242 221 aaKnown RBP eCLIP10.72□□□□□ -0.69
LMNA-213ENST00000473598 LINC00467Q9BRT7 94 aa10.72□□□□□ -0.69
LMNA-213ENST00000473598 PRADC1Q9BSG0 188 aa10.72□□□□□ -0.69
LMNA-213ENST00000473598 IGHV3-16A0A0C4DH30 117 aa10.71□□□□□ -0.69
LMNA-213ENST00000473598 KRTAP10-11P60412 298 aa10.71□□□□□ -0.69
LMNA-213ENST00000473598 C9orf153Q5TBE3 101 aa10.71□□□□□ -0.69
LMNA-213ENST00000473598 SFTA2Q6UW10 78 aa10.71□□□□□ -0.69
LMNA-213ENST00000473598 C1orf158Q8N1D5 194 aa10.71□□□□□ -0.69
LMNA-213ENST00000473598 C3orf22Q8N5N4 141 aa10.71□□□□□ -0.69
LMNA-213ENST00000473598 NTN5Q8WTR8 489 aaPredicted RBP10.71□□□□□ -0.69
LMNA-213ENST00000473598 MUC4Q99102 2169 aa10.71□□□□□ -0.7
LMNA-213ENST00000473598 TRGV11A0A075B6L2 103 aa10.7□□□□□ -0.7
LMNA-213ENST00000473598 CHCHD5Q9BSY4 110 aa10.7□□□□□ -0.7
LMNA-213ENST00000473598 IMUPQ9GZP8 106 aa10.7□□□□□ -0.7
LMNA-213ENST00000473598 IGLV2-18A0A075B6J9 118 aa10.7□□□□□ -0.7
LMNA-213ENST00000473598 P0DMU3 169 aa10.7□□□□□ -0.7
LMNA-213ENST00000473598 FAM231AP0DMU4 169 aa10.7□□□□□ -0.7
LMNA-213ENST00000473598 FAM231CP0DMU5 169 aa10.7□□□□□ -0.7
LMNA-213ENST00000473598 HTN1P15515 57 aa10.7□□□□□ -0.7
LMNA-213ENST00000473598 GATA1P15976 413 aaPredicted RBP10.7□□□□□ -0.7
LMNA-213ENST00000473598 TMEM101Q96IK0 257 aa10.7□□□□□ -0.7
LMNA-213ENST00000473598 UQCRQO14949 82 aa10.69□□□□□ -0.7
LMNA-213ENST00000473598 CSNK1G2-AS1Q8NCQ2 148 aa10.69□□□□□ -0.7
LMNA-213ENST00000473598 PRO1854Q9UHT4 67 aa10.69□□□□□ -0.7
LMNA-213ENST00000473598 PHLDA3Q9Y5J5 127 aa10.69□□□□□ -0.7
LMNA-213ENST00000473598 ZNF815PA8K554 130 aa10.68□□□□□ -0.7
LMNA-213ENST00000473598 ATP5G1P05496 136 aa10.68□□□□□ -0.7
LMNA-213ENST00000473598 LAGE3Q14657 143 aa10.68□□□□□ -0.7
LMNA-213ENST00000473598 C9orf85Q96MD7 179 aa10.68□□□□□ -0.7
LMNA-213ENST00000473598 LOC107984640A0A0U1RRK4 108 aa10.68□□□□□ -0.7
LMNA-213ENST00000473598 M0R381 172 aa10.68□□□□□ -0.7
LMNA-213ENST00000473598 SPRY2O43597 315 aa10.68□□□□□ -0.7
LMNA-213ENST00000473598 SCGB1D4Q6XE38 83 aa10.68□□□□□ -0.7
LMNA-213ENST00000473598 NRACQ8N912 160 aa10.68□□□□□ -0.7
LMNA-213ENST00000473598 LINC00526Q96FQ7 95 aa10.68□□□□□ -0.7
LMNA-213ENST00000473598 IGHV3OR16-12A0A075B7B8 117 aa10.67□□□□□ -0.7
LMNA-213ENST00000473598 PRM2P04554 102 aa10.67□□□□□ -0.7
LMNA-213ENST00000473598 HERVK_113P63121 156 aa10.67□□□□□ -0.7
LMNA-213ENST00000473598 KPRPQ5T749 579 aaPredicted RBP10.67□□□□□ -0.7
LMNA-213ENST00000473598 UBE2WQ96B02 151 aa10.67□□□□□ -0.7
LMNA-213ENST00000473598 TRAV26-2A0A0B4J265 109 aa10.67□□□□□ -0.7
LMNA-213ENST00000473598 CFC1BP0CG36 223 aa10.67□□□□□ -0.7
LMNA-213ENST00000473598 CFC1P0CG37 223 aa10.67□□□□□ -0.7
LMNA-213ENST00000473598 NXPH4O95158 308 aa10.66□□□□□ -0.7
LMNA-213ENST00000473598 IGHV4-30-4P0DP06 118 aa10.66□□□□□ -0.7
LMNA-213ENST00000473598 ATXN8Q156A1 80 aa10.66□□□□□ -0.7
LMNA-213ENST00000473598 ZNRF2Q8NHG8 242 aa10.66□□□□□ -0.7
LMNA-213ENST00000473598 KIR2DL5BQ8NHK3 375 aa10.66□□□□□ -0.7
LMNA-213ENST00000473598 MRAPQ8TCY5 172 aa10.65□□□□□ -0.7
LMNA-213ENST00000473598 TRBV10-2A0A0K0K1G8 114 aa10.65□□□□□ -0.71
LMNA-213ENST00000473598 APOC4P55056 127 aa10.65□□□□□ -0.71
LMNA-213ENST00000473598 ZNF415Q09FC8 603 aa10.65□□□□□ -0.71
LMNA-213ENST00000473598 LINC01620Q4KN68 170 aa10.65□□□□□ -0.71
LMNA-213ENST00000473598 C11orf72Q8NBR9 251 aa10.65□□□□□ -0.71
LMNA-213ENST00000473598 PLEKHB2Q96CS7 222 aa10.65□□□□□ -0.71
LMNA-213ENST00000473598 DPH3P1Q9H4G8 78 aa10.65□□□□□ -0.71
LMNA-213ENST00000473598 EMP1P54849 157 aa10.64□□□□□ -0.71
LMNA-213ENST00000473598 DEFB121Q5J5C9 76 aa10.64□□□□□ -0.71
LMNA-213ENST00000473598 C14orf178Q8N769 122 aaPredicted RBP10.64□□□□□ -0.71
LMNA-213ENST00000473598 POM121L12Q8N7R1 296 aa10.64□□□□□ -0.71
LMNA-213ENST00000473598 PRKDCP78527 4128 aaKnown RBP10.63□□□□□ -0.71
LMNA-213ENST00000473598 A0A0J9YY99 117 aa10.63□□□□□ -0.71
LMNA-213ENST00000473598 IGHV3-30P01768 117 aa10.63□□□□□ -0.71
LMNA-213ENST00000473598 IGHV3-30-5P0DP03 117 aa10.63□□□□□ -0.71
LMNA-213ENST00000473598 TMEM170BQ5T4T1 132 aa10.63□□□□□ -0.71
LMNA-213ENST00000473598 TMEM263Q8WUH6 116 aaKnown RBP10.63□□□□□ -0.71
LMNA-213ENST00000473598 TEX49A0A1B0GTD5 131 aa10.62□□□□□ -0.71
LMNA-213ENST00000473598 ZNF56Q15929 161 aa10.62□□□□□ -0.71
LMNA-213ENST00000473598 FAM236AA0A1B0GUQ0 79 aa10.62□□□□□ -0.71
LMNA-213ENST00000473598 FAM236BA0A1B0GV22 79 aa10.62□□□□□ -0.71
LMNA-213ENST00000473598 A8MZ25 164 aa10.62□□□□□ -0.71
LMNA-213ENST00000473598 NEXN-AS1Q8NBZ9 246 aa10.62□□□□□ -0.71
LMNA-213ENST00000473598 F5H768 121 aa10.61□□□□□ -0.71
LMNA-213ENST00000473598 ZNF876PQ49A33 203 aa10.61□□□□□ -0.71
LMNA-213ENST00000473598 KIF25-AS1Q9Y6Z4 181 aa10.61□□□□□ -0.71
LMNA-213ENST00000473598 A0A0B4J2C4 111 aa10.6□□□□□ -0.71
LMNA-213ENST00000473598 H3BT86 120 aa10.6□□□□□ -0.71
LMNA-213ENST00000473598 IGHV3-33P01772 117 aa10.6□□□□□ -0.71
LMNA-213ENST00000473598 LINC00315P59091 139 aa10.6□□□□□ -0.71
LMNA-213ENST00000473598 IL17DQ8TAD2 202 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms