RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 MIAQ16674 131 aa11.92□□□□□ -0.5
SNX4-204ENST00000473417 BAALCQ8WXS3 180 aa11.92□□□□□ -0.5
SNX4-204ENST00000473417 LECT2O14960 151 aa11.91□□□□□ -0.5
SNX4-204ENST00000473417 RPL32P62910 135 aaKnown RBP11.91□□□□□ -0.5
SNX4-204ENST00000473417 WFDC2Q14508 124 aa11.91□□□□□ -0.5
SNX4-204ENST00000473417 Q5VSD8 79 aa11.91□□□□□ -0.5
SNX4-204ENST00000473417 SVBPQ8N300 66 aa11.91□□□□□ -0.5
SNX4-204ENST00000473417 SMIM2Q9BVW6 85 aa11.91□□□□□ -0.5
SNX4-204ENST00000473417 SNAPINO95295 136 aa11.9□□□□□ -0.5
SNX4-204ENST00000473417 IGLV10-54A0A075B6I4 117 aa11.89□□□□□ -0.51
SNX4-204ENST00000473417 IGKV3OR2-268A0A0C4DH90 116 aa11.89□□□□□ -0.51
SNX4-204ENST00000473417 SLC7A5P1Q8MH63 180 aa11.89□□□□□ -0.51
SNX4-204ENST00000473417 LOC389332A0A1B0GUA5 103 aa11.88□□□□□ -0.51
SNX4-204ENST00000473417 TCAPO15273 167 aa11.88□□□□□ -0.51
SNX4-204ENST00000473417 INAFM2P0DMQ5 153 aa11.88□□□□□ -0.51
SNX4-204ENST00000473417 TMEM101Q96IK0 257 aa11.88□□□□□ -0.51
SNX4-204ENST00000473417 HLA-DQA1P01909 254 aa11.87□□□□□ -0.51
SNX4-204ENST00000473417 ZNF25P17030 456 aaPredicted RBP11.87□□□□□ -0.51
SNX4-204ENST00000473417 HAMPP81172 84 aa11.87□□□□□ -0.51
SNX4-204ENST00000473417 KIAA1644Q3SXP7 199 aa11.87□□□□□ -0.51
SNX4-204ENST00000473417 OR5A1Q8NGJ0 315 aa11.87□□□□□ -0.51
SNX4-204ENST00000473417 LAMTOR2Q9Y2Q5 125 aa11.87□□□□□ -0.51
SNX4-204ENST00000473417 DMBT1Q9UGM3 2413 aaPredicted RBP11.87□□□□□ -0.51
SNX4-204ENST00000473417 MAP1LC3AQ9H492 121 aa11.86□□□□□ -0.51
SNX4-204ENST00000473417 HERC1Q15751 4861 aa11.85□□□□□ -0.51
SNX4-204ENST00000473417 MYCBP2O75592 4640 aa11.85□□□□□ -0.51
SNX4-204ENST00000473417 TRAV8-4A0A0B4J246 113 aa11.85□□□□□ -0.51
SNX4-204ENST00000473417 SMR3BP02814 79 aaPredicted RBP11.85□□□□□ -0.51
SNX4-204ENST00000473417 DGAT2L7PQ6IED9 249 aa11.85□□□□□ -0.51
SNX4-204ENST00000473417 KRTAP26-1Q6PEX3 210 aa11.85□□□□□ -0.51
SNX4-204ENST00000473417 MRPL52Q86TS9 123 aaKnown RBP11.85□□□□□ -0.51
SNX4-204ENST00000473417 GNB1LQ9BYB4 327 aa11.85□□□□□ -0.51
SNX4-204ENST00000473417 TGIF2-C20orf24A0A0A6YYL0 155 aa11.84□□□□□ -0.51
SNX4-204ENST00000473417 PRSS47A8MTI9 375 aa11.84□□□□□ -0.51
SNX4-204ENST00000473417 RAB5AP20339 215 aa11.84□□□□□ -0.51
SNX4-204ENST00000473417 TMEM18Q96B42 140 aa11.84□□□□□ -0.51
SNX4-204ENST00000473417 FAM30AQ9NZY2 134 aa11.84□□□□□ -0.51
SNX4-204ENST00000473417 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.83□□□□□ -0.52
SNX4-204ENST00000473417 COX19Q49B96 90 aa11.83□□□□□ -0.52
SNX4-204ENST00000473417 CDC42SE2Q9NRR3 84 aa11.83□□□□□ -0.52
SNX4-204ENST00000473417 UBE2D4Q9Y2X8 147 aa11.83□□□□□ -0.52
SNX4-204ENST00000473417 RPL39P62891 51 aaKnown RBP11.82□□□□□ -0.52
SNX4-204ENST00000473417 SMAGPQ0VAQ4 97 aa11.82□□□□□ -0.52
SNX4-204ENST00000473417 Q6ZSA8 131 aa11.82□□□□□ -0.52
SNX4-204ENST00000473417 ZNF664Q8N3J9 261 aa11.82□□□□□ -0.52
SNX4-204ENST00000473417 Q8N8P6 123 aa11.82□□□□□ -0.52
SNX4-204ENST00000473417 USP17L23D6RBM5 183 aa11.81□□□□□ -0.52
SNX4-204ENST00000473417 FAM229AH3BQW9 127 aa11.81□□□□□ -0.52
SNX4-204ENST00000473417 MRPL18Q9H0U6 180 aaKnown RBP11.81□□□□□ -0.52
SNX4-204ENST00000473417 GAGE12HA6NDE8 117 aa11.8□□□□□ -0.52
SNX4-204ENST00000473417 MT-ND6P03923 174 aa11.8□□□□□ -0.52
SNX4-204ENST00000473417 FABP9Q0Z7S8 132 aa11.8□□□□□ -0.52
SNX4-204ENST00000473417 RNASE13Q5GAN3 156 aaKnown RBP11.8□□□□□ -0.52
SNX4-204ENST00000473417 CHCHD10Q8WYQ3 142 aaPredicted RBP11.8□□□□□ -0.52
SNX4-204ENST00000473417 CSDC2Q9Y534 153 aaKnown RBP11.8□□□□□ -0.52
SNX4-204ENST00000473417 LINC00959A0A1B0GUT2 108 aa11.79□□□□□ -0.52
SNX4-204ENST00000473417 TIMM21Q9BVV7 248 aa11.79□□□□□ -0.52
SNX4-204ENST00000473417 IFI27P40305 119 aaPredicted RBP11.78□□□□□ -0.52
SNX4-204ENST00000473417 C14orf177Q52M58 125 aa11.78□□□□□ -0.52
SNX4-204ENST00000473417 Q6ZUT4 128 aa11.78□□□□□ -0.52
SNX4-204ENST00000473417 ALKBH7Q9BT30 221 aaPredicted RBP11.78□□□□□ -0.52
SNX4-204ENST00000473417 NXT2Q9NPJ8 142 aaKnown RBP11.78□□□□□ -0.52
SNX4-204ENST00000473417 FLG2Q5D862 2391 aaPredicted RBP11.78□□□□□ -0.52
SNX4-204ENST00000473417 XCL1P47992 114 aa11.77□□□□□ -0.53
SNX4-204ENST00000473417 TRAPPC1Q9Y5R8 145 aa11.77□□□□□ -0.53
SNX4-204ENST00000473417 CCL25O15444 150 aa11.76□□□□□ -0.53
SNX4-204ENST00000473417 SS18Q15532 418 aa11.76□□□□□ -0.53
SNX4-204ENST00000473417 OPRPNQ99935 248 aaPredicted RBP11.76□□□□□ -0.53
SNX4-204ENST00000473417 SPANXA1Q9NS26 97 aa11.76□□□□□ -0.53
SNX4-204ENST00000473417 PRSS1P07477 247 aa11.75□□□□□ -0.53
SNX4-204ENST00000473417 LINC01620Q4KN68 170 aa11.75□□□□□ -0.53
SNX4-204ENST00000473417 ORMDL2Q53FV1 153 aa11.75□□□□□ -0.53
SNX4-204ENST00000473417 PRSS3P2Q8NHM4 247 aa11.75□□□□□ -0.53
SNX4-204ENST00000473417 TRAV13-1A0A0B4J241 112 aa11.74□□□□□ -0.53
SNX4-204ENST00000473417 FOXI1Q12951 378 aa11.74□□□□□ -0.53
SNX4-204ENST00000473417 CBLN2Q8IUK8 224 aa11.74□□□□□ -0.53
SNX4-204ENST00000473417 FAM104AQ969W3 186 aa11.74□□□□□ -0.53
SNX4-204ENST00000473417 YPEL4Q96NS1 127 aa11.74□□□□□ -0.53
SNX4-204ENST00000473417 K7EMI3 77 aa11.73□□□□□ -0.53
SNX4-204ENST00000473417 C2orf66Q6UXQ4 117 aa11.73□□□□□ -0.53
SNX4-204ENST00000473417 SMCO4Q9NRQ5 59 aa11.73□□□□□ -0.53
SNX4-204ENST00000473417 CYSLTR1Q9Y271 337 aa11.73□□□□□ -0.53
SNX4-204ENST00000473417 MRPS36P82909 103 aaKnown RBP11.72□□□□□ -0.53
SNX4-204ENST00000473417 hDV102S1A0JD36 115 aa11.71□□□□□ -0.53
SNX4-204ENST00000473417 C1orf196B1AJZ1 125 aa11.71□□□□□ -0.53
SNX4-204ENST00000473417 CD164L2Q6UWJ8 174 aa11.71□□□□□ -0.53
SNX4-204ENST00000473417 PYGO1Q9Y3Y4 419 aa11.71□□□□□ -0.53
SNX4-204ENST00000473417 CFAP161Q6P656 301 aa11.7□□□□□ -0.54
SNX4-204ENST00000473417 SCXQ7RTU7 201 aa11.7□□□□□ -0.54
SNX4-204ENST00000473417 LINC00528Q8N1L1 170 aa11.7□□□□□ -0.54
SNX4-204ENST00000473417 C15orf56Q8N910 161 aa11.7□□□□□ -0.54
SNX4-204ENST00000473417 IGLV4-3A0A075B6K6 122 aa11.69□□□□□ -0.54
SNX4-204ENST00000473417 HIGD2BQ4VC39 106 aa11.69□□□□□ -0.54
SNX4-204ENST00000473417 IFITM10A6NMD0 228 aa11.68□□□□□ -0.54
SNX4-204ENST00000473417 PLA2G1BP04054 148 aaKnown RBP11.68□□□□□ -0.54
SNX4-204ENST00000473417 FA2HQ7L5A8 372 aa11.68□□□□□ -0.54
SNX4-204ENST00000473417 G0S2P27469 103 aa11.67□□□□□ -0.54
SNX4-204ENST00000473417 TMEM141Q96I45 108 aa11.67□□□□□ -0.54
SNX4-204ENST00000473417 CHAC1Q9BUX1 264 aa11.67□□□□□ -0.54
SNX4-204ENST00000473417 AP5S1Q9NUS5 200 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms