RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 MRPL51Q4U2R6 128 aaKnown RBP7.52□□□□□ -1.21
CPNE1-222ENST00000473373 FAM104BQ5XKR9 115 aa7.52□□□□□ -1.21
CPNE1-222ENST00000473373 TMEM18Q96B42 140 aa7.52□□□□□ -1.21
CPNE1-222ENST00000473373 DMBT1Q9UGM3 2413 aaPredicted RBP7.51□□□□□ -1.21
CPNE1-222ENST00000473373 MT-ND4LP03901 98 aa7.51□□□□□ -1.21
CPNE1-222ENST00000473373 PNRC1Q12796 327 aaPredicted RBP7.51□□□□□ -1.21
CPNE1-222ENST00000473373 CHCHD10Q8WYQ3 142 aaPredicted RBP7.51□□□□□ -1.21
CPNE1-222ENST00000473373 TRBV27A0A0K0K1C4 114 aa7.5□□□□□ -1.21
CPNE1-222ENST00000473373 LINC00862A6NCI5 91 aa7.5□□□□□ -1.21
CPNE1-222ENST00000473373 XCL1P47992 114 aa7.5□□□□□ -1.21
CPNE1-222ENST00000473373 POLR2KP53803 58 aaKnown RBP7.5□□□□□ -1.21
CPNE1-222ENST00000473373 HIGD2BQ4VC39 106 aa7.5□□□□□ -1.21
CPNE1-222ENST00000473373 SCXQ7RTU7 201 aa7.5□□□□□ -1.21
CPNE1-222ENST00000473373 FAT1Q14517 4588 aa7.5□□□□□ -1.21
CPNE1-222ENST00000473373 D6R8Y8 96 aa7.49□□□□□ -1.21
CPNE1-222ENST00000473373 TCAPO15273 167 aa7.49□□□□□ -1.21
CPNE1-222ENST00000473373 KRTAP26-1Q6PEX3 210 aa7.49□□□□□ -1.21
CPNE1-222ENST00000473373 ANAPC16Q96DE5 110 aa7.49□□□□□ -1.21
CPNE1-222ENST00000473373 CHAC1Q9BUX1 264 aa7.49□□□□□ -1.21
CPNE1-222ENST00000473373 IGHV3-64A0A075B6Q5 118 aa7.48□□□□□ -1.21
CPNE1-222ENST00000473373 CCL25O15444 150 aa7.48□□□□□ -1.21
CPNE1-222ENST00000473373 TNFRSF6BO95407 300 aa7.48□□□□□ -1.21
CPNE1-222ENST00000473373 ESDP10768 282 aa7.48□□□□□ -1.21
CPNE1-222ENST00000473373 Q6ZSA8 131 aa7.48□□□□□ -1.21
CPNE1-222ENST00000473373 ATP5L2Q7Z4Y8 100 aa7.48□□□□□ -1.21
CPNE1-222ENST00000473373 ZNF664Q8N3J9 261 aa7.48□□□□□ -1.21
CPNE1-222ENST00000473373 NRACQ8N912 160 aa7.48□□□□□ -1.21
CPNE1-222ENST00000473373 C9orf163Q8N9P6 203 aa7.48□□□□□ -1.21
CPNE1-222ENST00000473373 C20orf78Q9BR46 151 aa7.48□□□□□ -1.21
CPNE1-222ENST00000473373 LINC00959A0A1B0GUT2 108 aa7.47□□□□□ -1.21
CPNE1-222ENST00000473373 PPBPP02775 128 aa7.47□□□□□ -1.21
CPNE1-222ENST00000473373 RAB5AP20339 215 aa7.47□□□□□ -1.21
CPNE1-222ENST00000473373 MALP21145 153 aa7.47□□□□□ -1.21
CPNE1-222ENST00000473373 RNASE13Q5GAN3 156 aaKnown RBP7.47□□□□□ -1.21
CPNE1-222ENST00000473373 CLLU1Q5K131 121 aa7.47□□□□□ -1.21
CPNE1-222ENST00000473373 ORMDL3Q8N138 153 aa7.47□□□□□ -1.21
CPNE1-222ENST00000473373 CIRBP-AS1Q8TBR5 109 aa7.47□□□□□ -1.21
CPNE1-222ENST00000473373 SMIM2Q9BVW6 85 aa7.46□□□□□ -1.22
CPNE1-222ENST00000473373 MYCBP2O75592 4640 aa7.46□□□□□ -1.22
CPNE1-222ENST00000473373 TRAV13-1A0A0B4J241 112 aa7.45□□□□□ -1.22
CPNE1-222ENST00000473373 ZNF561-AS1K7EIQ3 104 aa7.45□□□□□ -1.22
CPNE1-222ENST00000473373 NPYP01303 97 aa7.45□□□□□ -1.22
CPNE1-222ENST00000473373 CNBPP62633 177 aaKnown RBP7.45□□□□□ -1.22
CPNE1-222ENST00000473373 TMEM136Q6ZRR5 245 aa7.45□□□□□ -1.22
CPNE1-222ENST00000473373 MRPL52Q86TS9 123 aaKnown RBP7.45□□□□□ -1.22
CPNE1-222ENST00000473373 C15orf56Q8N910 161 aa7.45□□□□□ -1.22
CPNE1-222ENST00000473373 PRELID3AQ96N28 172 aa7.45□□□□□ -1.22
CPNE1-222ENST00000473373 CDC42SE2Q9NRR3 84 aa7.45□□□□□ -1.22
CPNE1-222ENST00000473373 SRRM2Q9UQ35 2752 aaKnown RBP7.44□□□□□ -1.22
CPNE1-222ENST00000473373 IGHV1-58A0A0C4DH39 117 aa7.44□□□□□ -1.22
CPNE1-222ENST00000473373 LOC389332A0A1B0GUA5 103 aa7.44□□□□□ -1.22
CPNE1-222ENST00000473373 A0A1B0GXF2 115 aa7.44□□□□□ -1.22
CPNE1-222ENST00000473373 C1orf196B1AJZ1 125 aa7.44□□□□□ -1.22
CPNE1-222ENST00000473373 MAP1LC3AQ9H492 121 aa7.44□□□□□ -1.22
CPNE1-222ENST00000473373 UBE2D4Q9Y2X8 147 aa7.44□□□□□ -1.22
CPNE1-222ENST00000473373 VPS13BQ7Z7G8 4022 aa7.43□□□□□ -1.22
CPNE1-222ENST00000473373 TRBV24-1A0A075B6N3 115 aa7.43□□□□□ -1.22
CPNE1-222ENST00000473373 PHOX2AO14813 284 aa7.43□□□□□ -1.22
CPNE1-222ENST00000473373 RPL39P62891 51 aaKnown RBP7.43□□□□□ -1.22
CPNE1-222ENST00000473373 FOXI1Q12951 378 aa7.43□□□□□ -1.22
CPNE1-222ENST00000473373 UQCC3Q6UW78 93 aa7.43□□□□□ -1.22
CPNE1-222ENST00000473373 CD164L2Q6UWJ8 174 aa7.43□□□□□ -1.22
CPNE1-222ENST00000473373 Q6ZUT4 128 aa7.43□□□□□ -1.22
CPNE1-222ENST00000473373 CTDSP1Q9GZU7 261 aa7.43□□□□□ -1.22
CPNE1-222ENST00000473373 PKIGQ9Y2B9 76 aa7.43□□□□□ -1.22
CPNE1-222ENST00000473373 UBR4Q5T4S7 5183 aa7.43□□□□□ -1.22
CPNE1-222ENST00000473373 IGKV2-24A0A0C4DH68 120 aa7.42□□□□□ -1.22
CPNE1-222ENST00000473373 COX7A2LO14548 114 aa7.42□□□□□ -1.22
CPNE1-222ENST00000473373 APOMO95445 188 aa7.42□□□□□ -1.22
CPNE1-222ENST00000473373 S100PP25815 95 aa7.42□□□□□ -1.22
CPNE1-222ENST00000473373 IFI27P40305 119 aaPredicted RBP7.42□□□□□ -1.22
CPNE1-222ENST00000473373 RPL37AP61513 92 aaKnown RBP7.42□□□□□ -1.22
CPNE1-222ENST00000473373 RPL32P62910 135 aaKnown RBP7.42□□□□□ -1.22
CPNE1-222ENST00000473373 LCE2CQ5TA81 110 aa7.42□□□□□ -1.22
CPNE1-222ENST00000473373 CSDC2Q9Y534 153 aaKnown RBP7.42□□□□□ -1.22
CPNE1-222ENST00000473373 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.42□□□□□ -1.22
CPNE1-222ENST00000473373 GVQW2A0A096LPI5 108 aaPredicted RBP7.41□□□□□ -1.22
CPNE1-222ENST00000473373 COX6A2Q02221 97 aa7.41□□□□□ -1.22
CPNE1-222ENST00000473373 MAJINQ3KP22 176 aa7.41□□□□□ -1.22
CPNE1-222ENST00000473373 SDIM1Q6ZPB5 146 aa7.41□□□□□ -1.22
CPNE1-222ENST00000473373 COMMD7Q86VX2 200 aa7.41□□□□□ -1.22
CPNE1-222ENST00000473373 LINC00526Q96FQ7 95 aa7.41□□□□□ -1.22
CPNE1-222ENST00000473373 CARD19Q96LW7 228 aa7.41□□□□□ -1.22
CPNE1-222ENST00000473373 TIMM21Q9BVV7 248 aa7.41□□□□□ -1.22
CPNE1-222ENST00000473373 SPANXA1Q9NS26 97 aa7.41□□□□□ -1.22
CPNE1-222ENST00000473373 IFITM10A6NMD0 228 aa7.4□□□□□ -1.22
CPNE1-222ENST00000473373 CHTF8P0CG12 524 aa7.4□□□□□ -1.22
CPNE1-222ENST00000473373 C5orf38Q86SI9 138 aa7.4□□□□□ -1.22
CPNE1-222ENST00000473373 LAMTOR2Q9Y2Q5 125 aa7.4□□□□□ -1.22
CPNE1-222ENST00000473373 FLG2Q5D862 2391 aaPredicted RBP7.39□□□□□ -1.23
CPNE1-222ENST00000473373 TMEM218A2RU14 115 aa7.39□□□□□ -1.23
CPNE1-222ENST00000473373 SLPIP03973 132 aa7.39□□□□□ -1.23
CPNE1-222ENST00000473373 Q6ZN92 141 aa7.39□□□□□ -1.23
CPNE1-222ENST00000473373 TGIF2-C20orf24A0A0A6YYL0 155 aa7.38□□□□□ -1.23
CPNE1-222ENST00000473373 IFITM2Q01629 132 aa7.38□□□□□ -1.23
CPNE1-222ENST00000473373 SYCNQ0VAF6 134 aa7.38□□□□□ -1.23
CPNE1-222ENST00000473373 PRSS3P2Q8NHM4 247 aa7.38□□□□□ -1.23
CPNE1-222ENST00000473373 C7orf33Q8WU49 177 aa7.38□□□□□ -1.23
CPNE1-222ENST00000473373 CAMK2N2Q96S95 79 aa7.38□□□□□ -1.23
CPNE1-222ENST00000473373 C2orf88Q9BSF0 95 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms