RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 IGHV3-64A0A075B6Q5 118 aa12.59□□□□□ -0.39
COMMD1-208ENST00000472729 CNBPP62633 177 aaKnown RBP12.59□□□□□ -0.39
COMMD1-208ENST00000472729 HBBP68871 147 aa12.59□□□□□ -0.39
COMMD1-208ENST00000472729 SS18Q15532 418 aa12.59□□□□□ -0.39
COMMD1-208ENST00000472729 ESDP10768 282 aa12.58□□□□□ -0.4
COMMD1-208ENST00000472729 XCL1P47992 114 aa12.58□□□□□ -0.4
COMMD1-208ENST00000472729 MRPL54Q6P161 138 aaKnown RBP12.58□□□□□ -0.4
COMMD1-208ENST00000472729 TCAPO15273 167 aa12.57□□□□□ -0.4
COMMD1-208ENST00000472729 MRPL51Q4U2R6 128 aaKnown RBP12.57□□□□□ -0.4
COMMD1-208ENST00000472729 C20orf78Q9BR46 151 aa12.57□□□□□ -0.4
COMMD1-208ENST00000472729 MRPL52Q86TS9 123 aaKnown RBP12.56□□□□□ -0.4
COMMD1-208ENST00000472729 ZNF664Q8N3J9 261 aa12.56□□□□□ -0.4
COMMD1-208ENST00000472729 PNRC1Q12796 327 aaPredicted RBP12.55□□□□□ -0.4
COMMD1-208ENST00000472729 NRACQ8N912 160 aa12.55□□□□□ -0.4
COMMD1-208ENST00000472729 LINC00959A0A1B0GUT2 108 aa12.54□□□□□ -0.4
COMMD1-208ENST00000472729 CCL25O15444 150 aa12.54□□□□□ -0.4
COMMD1-208ENST00000472729 MT-ND4LP03901 98 aa12.54□□□□□ -0.4
COMMD1-208ENST00000472729 HIGD2BQ4VC39 106 aa12.54□□□□□ -0.4
COMMD1-208ENST00000472729 CDC42SE2Q9NRR3 84 aa12.54□□□□□ -0.4
COMMD1-208ENST00000472729 PPBPP02775 128 aa12.53□□□□□ -0.4
COMMD1-208ENST00000472729 SDIM1Q6ZPB5 146 aa12.53□□□□□ -0.4
COMMD1-208ENST00000472729 D6R8Y8 96 aa12.52□□□□□ -0.41
COMMD1-208ENST00000472729 TNFRSF6BO95407 300 aa12.52□□□□□ -0.41
COMMD1-208ENST00000472729 ATP5L2Q7Z4Y8 100 aa12.52□□□□□ -0.41
COMMD1-208ENST00000472729 TRBV24-1A0A075B6N3 115 aa12.51□□□□□ -0.41
COMMD1-208ENST00000472729 C1orf196B1AJZ1 125 aa12.51□□□□□ -0.41
COMMD1-208ENST00000472729 J3QL48 77 aa12.51□□□□□ -0.41
COMMD1-208ENST00000472729 MALP21145 153 aa12.51□□□□□ -0.41
COMMD1-208ENST00000472729 FOXI1Q12951 378 aa12.51□□□□□ -0.41
COMMD1-208ENST00000472729 C15orf56Q8N910 161 aa12.51□□□□□ -0.41
COMMD1-208ENST00000472729 ANAPC16Q96DE5 110 aa12.51□□□□□ -0.41
COMMD1-208ENST00000472729 CSDC2Q9Y534 153 aaKnown RBP12.51□□□□□ -0.41
COMMD1-208ENST00000472729 IGHV1-58A0A0C4DH39 117 aa12.5□□□□□ -0.41
COMMD1-208ENST00000472729 RAB5AP20339 215 aa12.5□□□□□ -0.41
COMMD1-208ENST00000472729 CD164L2Q6UWJ8 174 aa12.5□□□□□ -0.41
COMMD1-208ENST00000472729 PKIGQ9Y2B9 76 aa12.5□□□□□ -0.41
COMMD1-208ENST00000472729 GVQW2A0A096LPI5 108 aaPredicted RBP12.49□□□□□ -0.41
COMMD1-208ENST00000472729 ZNF561-AS1K7EIQ3 104 aa12.49□□□□□ -0.41
COMMD1-208ENST00000472729 RPL37AP61513 92 aaKnown RBP12.49□□□□□ -0.41
COMMD1-208ENST00000472729 RPL32P62910 135 aaKnown RBP12.49□□□□□ -0.41
COMMD1-208ENST00000472729 ORMDL3Q8N138 153 aa12.49□□□□□ -0.41
COMMD1-208ENST00000472729 UBE2D4Q9Y2X8 147 aa12.49□□□□□ -0.41
COMMD1-208ENST00000472729 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.49□□□□□ -0.41
COMMD1-208ENST00000472729 TRAV13-1A0A0B4J241 112 aa12.48□□□□□ -0.41
COMMD1-208ENST00000472729 A0A1B0GXF2 115 aa12.48□□□□□ -0.41
COMMD1-208ENST00000472729 PHOX2AO14813 284 aa12.48□□□□□ -0.41
COMMD1-208ENST00000472729 TMEM136Q6ZRR5 245 aa12.48□□□□□ -0.41
COMMD1-208ENST00000472729 SMIM2Q9BVW6 85 aa12.48□□□□□ -0.41
COMMD1-208ENST00000472729 DNAH8Q96JB1 4490 aa12.48□□□□□ -0.41
COMMD1-208ENST00000472729 SLPIP03973 132 aa12.47□□□□□ -0.41
COMMD1-208ENST00000472729 COX7A2LO14548 114 aa12.46□□□□□ -0.41
COMMD1-208ENST00000472729 COX6A2Q02221 97 aa12.46□□□□□ -0.41
COMMD1-208ENST00000472729 CLLU1Q5K131 121 aa12.46□□□□□ -0.41
COMMD1-208ENST00000472729 PRELID3AQ96N28 172 aa12.46□□□□□ -0.41
COMMD1-208ENST00000472729 TIMM21Q9BVV7 248 aa12.46□□□□□ -0.41
COMMD1-208ENST00000472729 NPYP01303 97 aa12.45□□□□□ -0.42
COMMD1-208ENST00000472729 RNASE13Q5GAN3 156 aaKnown RBP12.45□□□□□ -0.42
COMMD1-208ENST00000472729 SRRM2Q9UQ35 2752 aaKnown RBP12.45□□□□□ -0.42
COMMD1-208ENST00000472729 SPANXA1Q9NS26 97 aa12.44□□□□□ -0.42
COMMD1-208ENST00000472729 IGKV2-24A0A0C4DH68 120 aa12.43□□□□□ -0.42
COMMD1-208ENST00000472729 APOMO95445 188 aa12.43□□□□□ -0.42
COMMD1-208ENST00000472729 MAJINQ3KP22 176 aa12.43□□□□□ -0.42
COMMD1-208ENST00000472729 CARD19Q96LW7 228 aa12.43□□□□□ -0.42
COMMD1-208ENST00000472729 LINC00474Q9P2X8 69 aa12.43□□□□□ -0.42
COMMD1-208ENST00000472729 PANO1I0J062 215 aa12.42□□□□□ -0.42
COMMD1-208ENST00000472729 CHTF8P0CG12 524 aa12.42□□□□□ -0.42
COMMD1-208ENST00000472729 UQCC3Q6UW78 93 aa12.42□□□□□ -0.42
COMMD1-208ENST00000472729 Q6ZUT4 128 aa12.42□□□□□ -0.42
COMMD1-208ENST00000472729 MAP1LC3AQ9H492 121 aa12.42□□□□□ -0.42
COMMD1-208ENST00000472729 LAMTOR2Q9Y2Q5 125 aa12.42□□□□□ -0.42
COMMD1-208ENST00000472729 A0A087WYN8 130 aa12.41□□□□□ -0.42
COMMD1-208ENST00000472729 RPL39P62891 51 aaKnown RBP12.41□□□□□ -0.42
COMMD1-208ENST00000472729 CIRBPQ14011 172 aaKnown RBP12.41□□□□□ -0.42
COMMD1-208ENST00000472729 SPACA4Q8TDM5 124 aa12.41□□□□□ -0.42
COMMD1-208ENST00000472729 C7orf33Q8WU49 177 aa12.41□□□□□ -0.42
COMMD1-208ENST00000472729 LOC389332A0A1B0GUA5 103 aa12.4□□□□□ -0.42
COMMD1-208ENST00000472729 IFI27P40305 119 aaPredicted RBP12.4□□□□□ -0.42
COMMD1-208ENST00000472729 SYCNQ0VAF6 134 aa12.4□□□□□ -0.42
COMMD1-208ENST00000472729 PRSS3P2Q8NHM4 247 aa12.4□□□□□ -0.42
COMMD1-208ENST00000472729 LINC00526Q96FQ7 95 aa12.4□□□□□ -0.42
COMMD1-208ENST00000472729 C5orf38Q86SI9 138 aa12.39□□□□□ -0.43
COMMD1-208ENST00000472729 CTDSP1Q9GZU7 261 aa12.39□□□□□ -0.43
COMMD1-208ENST00000472729 DMBT1Q9UGM3 2413 aaPredicted RBP12.39□□□□□ -0.43
COMMD1-208ENST00000472729 FLG2Q5D862 2391 aaPredicted RBP12.38□□□□□ -0.43
COMMD1-208ENST00000472729 IFITM10A6NMD0 228 aa12.38□□□□□ -0.43
COMMD1-208ENST00000472729 CAMK2N2Q96S95 79 aa12.37□□□□□ -0.43
COMMD1-208ENST00000472729 IMMP2LQ96T52 175 aa12.37□□□□□ -0.43
COMMD1-208ENST00000472729 VPS13BQ7Z7G8 4022 aa12.36□□□□□ -0.43
COMMD1-208ENST00000472729 IGLV4-69A0A075B6H9 119 aa12.36□□□□□ -0.43
COMMD1-208ENST00000472729 MRPS36P82909 103 aaKnown RBP12.36□□□□□ -0.43
COMMD1-208ENST00000472729 STPG4Q8N801 248 aa12.36□□□□□ -0.43
COMMD1-208ENST00000472729 PLAC8Q9NZF1 115 aa12.36□□□□□ -0.43
COMMD1-208ENST00000472729 TMEM218A2RU14 115 aa12.35□□□□□ -0.43
COMMD1-208ENST00000472729 KRTAP29-1A8MX34 341 aaPredicted RBP12.35□□□□□ -0.43
COMMD1-208ENST00000472729 S100PP25815 95 aa12.35□□□□□ -0.43
COMMD1-208ENST00000472729 Q6ZN92 141 aa12.34□□□□□ -0.43
COMMD1-208ENST00000472729 OPRPNQ99935 248 aaPredicted RBP12.34□□□□□ -0.43
COMMD1-208ENST00000472729 A0A096LNI7 61 aa12.33□□□□□ -0.44
COMMD1-208ENST00000472729 TGIF2-C20orf24A0A0A6YYL0 155 aa12.33□□□□□ -0.44
COMMD1-208ENST00000472729 KRTAP10-4P60372 401 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms