RNA–Protein interactions for RNA: ENST00000472147.1

ITGB1-209, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-209ENST00000472147 TSKUQ8WUA8 353 aa3.51□□□□□ -1.85
ITGB1-209ENST00000472147 ISOC2Q96AB3 205 aa3.51□□□□□ -1.85
ITGB1-209ENST00000472147 AP1S3Q96PC3 154 aa3.51□□□□□ -1.85
ITGB1-209ENST00000472147 MARVELD1Q9BSK0 173 aa3.51□□□□□ -1.85
ITGB1-209ENST00000472147 LOC107984640A0A0U1RRK4 108 aa3.5□□□□□ -1.85
ITGB1-209ENST00000472147 A0A1W2PNN7 141 aa3.5□□□□□ -1.85
ITGB1-209ENST00000472147 NCR2O95944 276 aa3.5□□□□□ -1.85
ITGB1-209ENST00000472147 RPL13AP40429 203 aaKnown RBP3.5□□□□□ -1.85
ITGB1-209ENST00000472147 NKX2-5P52952 324 aaPredicted RBP3.5□□□□□ -1.85
ITGB1-209ENST00000472147 RPS20P60866 119 aaKnown RBP3.5□□□□□ -1.85
ITGB1-209ENST00000472147 SSTP61278 116 aa3.5□□□□□ -1.85
ITGB1-209ENST00000472147 C1orf137Q5JT78 98 aa3.5□□□□□ -1.85
ITGB1-209ENST00000472147 CST9LP1Q5W188 147 aa3.5□□□□□ -1.85
ITGB1-209ENST00000472147 AMMECR1LQ6DCA0 310 aa3.5□□□□□ -1.85
ITGB1-209ENST00000472147 TMUB2Q71RG4 321 aa3.5□□□□□ -1.85
ITGB1-209ENST00000472147 ENKURQ8TC29 256 aa3.5□□□□□ -1.85
ITGB1-209ENST00000472147 CARD19Q96LW7 228 aa3.5□□□□□ -1.85
ITGB1-209ENST00000472147 NDUFA13Q9P0J0 144 aa3.5□□□□□ -1.85
ITGB1-209ENST00000472147 CARHSP1Q9Y2V2 147 aaKnown RBP3.5□□□□□ -1.85
ITGB1-209ENST00000472147 BORCS7-ASMTA0A0B4J1R7 106 aa3.49□□□□□ -1.85
ITGB1-209ENST00000472147 MUC21A0A140T8X8 626 aa3.49□□□□□ -1.85
ITGB1-209ENST00000472147 H0Y9J4 135 aa3.49□□□□□ -1.85
ITGB1-209ENST00000472147 CCL25O15444 150 aa3.49□□□□□ -1.85
ITGB1-209ENST00000472147 IGLV7-43P04211 117 aa3.49□□□□□ -1.85
ITGB1-209ENST00000472147 ZNF25P17030 456 aaPredicted RBP3.49□□□□□ -1.85
ITGB1-209ENST00000472147 GAGE2BQ13066 116 aa3.49□□□□□ -1.85
ITGB1-209ENST00000472147 ZNF726P1Q15940 193 aa3.49□□□□□ -1.85
ITGB1-209ENST00000472147 C9orf116Q5BN46 136 aaPredicted RBP3.49□□□□□ -1.85
ITGB1-209ENST00000472147 TEX261Q6UWH6 196 aa3.49□□□□□ -1.85
ITGB1-209ENST00000472147 CD164L2Q6UWJ8 174 aa3.49□□□□□ -1.85
ITGB1-209ENST00000472147 OR5A1Q8NGJ0 315 aa3.49□□□□□ -1.85
ITGB1-209ENST00000472147 S100ZQ8WXG8 99 aa3.49□□□□□ -1.85
ITGB1-209ENST00000472147 IGLV4-69A0A075B6H9 119 aa3.48□□□□□ -1.85
ITGB1-209ENST00000472147 A0A087WZ39 114 aa3.48□□□□□ -1.85
ITGB1-209ENST00000472147 IGKV3OR2-268A0A0C4DH90 116 aa3.48□□□□□ -1.85
ITGB1-209ENST00000472147 LINC00959A0A1B0GUT2 108 aa3.48□□□□□ -1.85
ITGB1-209ENST00000472147 XKRY2A2RUG3 117 aa3.48□□□□□ -1.85
ITGB1-209ENST00000472147 TRGC1P0CF51 173 aa3.48□□□□□ -1.85
ITGB1-209ENST00000472147 NTF3P20783 257 aa3.48□□□□□ -1.85
ITGB1-209ENST00000472147 AKR1C3P42330 323 aa3.48□□□□□ -1.85
ITGB1-209ENST00000472147 XCL1P47992 114 aa3.48□□□□□ -1.85
ITGB1-209ENST00000472147 EIF5AP63241 154 aaKnown RBP3.48□□□□□ -1.85
ITGB1-209ENST00000472147 SS18Q15532 418 aa3.48□□□□□ -1.85
ITGB1-209ENST00000472147 AKR1C8PQ5T2L2 129 aa3.48□□□□□ -1.85
ITGB1-209ENST00000472147 RNASEKQ6P5S7 137 aaKnown RBP3.48□□□□□ -1.85
ITGB1-209ENST00000472147 C9orf62Q8N4C0 152 aa3.48□□□□□ -1.85
ITGB1-209ENST00000472147 TMEM101Q96IK0 257 aa3.48□□□□□ -1.85
ITGB1-209ENST00000472147 BTF3L4Q96K17 158 aa3.48□□□□□ -1.85
ITGB1-209ENST00000472147 C2orf48Q96LS8 159 aa3.48□□□□□ -1.85
ITGB1-209ENST00000472147 C1orf196B1AJZ1 125 aa3.47□□□□□ -1.85
ITGB1-209ENST00000472147 F8WDY8 70 aa3.47□□□□□ -1.85
ITGB1-209ENST00000472147 UPK1BO75841 260 aa3.47□□□□□ -1.85
ITGB1-209ENST00000472147 APOMO95445 188 aa3.47□□□□□ -1.85
ITGB1-209ENST00000472147 MGPP08493 103 aa3.47□□□□□ -1.85
ITGB1-209ENST00000472147 IGLC6P0CF74 106 aa3.47□□□□□ -1.85
ITGB1-209ENST00000472147 ESDP10768 282 aa3.47□□□□□ -1.85
ITGB1-209ENST00000472147 CAMPP49913 170 aa3.47□□□□□ -1.85
ITGB1-209ENST00000472147 EIF5AL1Q6IS14 154 aaKnown RBP3.47□□□□□ -1.85
ITGB1-209ENST00000472147 NUP35Q8NFH5 326 aa3.47□□□□□ -1.85
ITGB1-209ENST00000472147 OR2D3Q8NGH3 330 aa3.47□□□□□ -1.85
ITGB1-209ENST00000472147 MAP1LC3B2A6NCE7 125 aa3.46□□□□□ -1.86
ITGB1-209ENST00000472147 KRTAP1-4P0C5Y4 121 aa3.46□□□□□ -1.86
ITGB1-209ENST00000472147 UBE2D1P51668 147 aa3.46□□□□□ -1.86
ITGB1-209ENST00000472147 TMEM241Q24JQ0 296 aa3.46□□□□□ -1.86
ITGB1-209ENST00000472147 RPL7L1Q6DKI1 246 aaKnown RBP3.46□□□□□ -1.86
ITGB1-209ENST00000472147 KRTAP5-1Q6L8H4 278 aa3.46□□□□□ -1.86
ITGB1-209ENST00000472147 MBD3L1Q8WWY6 194 aa3.46□□□□□ -1.86
ITGB1-209ENST00000472147 LINC00526Q96FQ7 95 aa3.46□□□□□ -1.86
ITGB1-209ENST00000472147 IMMP2LQ96T52 175 aa3.46□□□□□ -1.86
ITGB1-209ENST00000472147 TPPP3Q9BW30 176 aa3.46□□□□□ -1.86
ITGB1-209ENST00000472147 MAP1LC3BQ9GZQ8 125 aa3.46□□□□□ -1.86
ITGB1-209ENST00000472147 CDC42SE2Q9NRR3 84 aa3.46□□□□□ -1.86
ITGB1-209ENST00000472147 IFITM10A6NMD0 228 aa3.45□□□□□ -1.86
ITGB1-209ENST00000472147 I3L3M4 83 aa3.45□□□□□ -1.86
ITGB1-209ENST00000472147 COX7A2LO14548 114 aa3.45□□□□□ -1.86
ITGB1-209ENST00000472147 IFNA1P01562 189 aa3.45□□□□□ -1.86
ITGB1-209ENST00000472147 APCSP02743 223 aa3.45□□□□□ -1.86
ITGB1-209ENST00000472147 PMCHP20382 165 aa3.45□□□□□ -1.86
ITGB1-209ENST00000472147 LYZL1Q6UWQ5 148 aa3.45□□□□□ -1.86
ITGB1-209ENST00000472147 Q75L30 129 aa3.45□□□□□ -1.86
ITGB1-209ENST00000472147 PHF5AQ7RTV0 110 aaKnown RBP3.45□□□□□ -1.86
ITGB1-209ENST00000472147 MRPL52Q86TS9 123 aaKnown RBP3.45□□□□□ -1.86
ITGB1-209ENST00000472147 GATD1Q8NB37 220 aa3.45□□□□□ -1.86
ITGB1-209ENST00000472147 SFT2D1Q8WV19 159 aa3.45□□□□□ -1.86
ITGB1-209ENST00000472147 SMIM12Q96EX1 92 aa3.45□□□□□ -1.86
ITGB1-209ENST00000472147 CAMK2N2Q96S95 79 aa3.45□□□□□ -1.86
ITGB1-209ENST00000472147 BIN3Q9NQY0 253 aa3.45□□□□□ -1.86
ITGB1-209ENST00000472147 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.44□□□□□ -1.86
ITGB1-209ENST00000472147 IGKV2-29A2NJV5 120 aaPredicted RBP3.44□□□□□ -1.86
ITGB1-209ENST00000472147 C19orf71A6NCJ1 209 aa3.44□□□□□ -1.86
ITGB1-209ENST00000472147 UMAD1C9J7I0 102 aa3.44□□□□□ -1.86
ITGB1-209ENST00000472147 G3V3Q6 166 aa3.44□□□□□ -1.86
ITGB1-209ENST00000472147 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.44□□□□□ -1.86
ITGB1-209ENST00000472147 PFDN1O60925 122 aa3.44□□□□□ -1.86
ITGB1-209ENST00000472147 RPL35P42766 123 aaKnown RBP3.44□□□□□ -1.86
ITGB1-209ENST00000472147 DEFA1P59665 94 aa3.44□□□□□ -1.86
ITGB1-209ENST00000472147 DEFA3P59666 94 aa3.44□□□□□ -1.86
ITGB1-209ENST00000472147 CTAG1AP78358 180 aa3.44□□□□□ -1.86
ITGB1-209ENST00000472147 IFITM3Q01628 133 aa3.44□□□□□ -1.86
ITGB1-209ENST00000472147 MEF2BQ02080 365 aaPredicted RBP3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms