RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 RHPN1-AS1Q9BWJ2 59 aa-0.32□□□□□ -2.46
UBXN4-207ENST00000471246 CCDC90BQ9GZT6 254 aa-0.32□□□□□ -2.46
UBXN4-207ENST00000471246 PBOV1Q9GZY1 135 aa-0.32□□□□□ -2.46
UBXN4-207ENST00000471246 DRC3Q9H069 523 aa-0.32□□□□□ -2.46
UBXN4-207ENST00000471246 CST11Q9H112 138 aa-0.32□□□□□ -2.46
UBXN4-207ENST00000471246 CYSLTR1Q9Y271 337 aa-0.32□□□□□ -2.46
UBXN4-207ENST00000471246 UFC1Q9Y3C8 167 aa-0.32□□□□□ -2.46
UBXN4-207ENST00000471246 NUBP2Q9Y5Y2 271 aa-0.32□□□□□ -2.46
UBXN4-207ENST00000471246 TRAV12-2A0A075B6T6 113 aa-0.33□□□□□ -2.46
UBXN4-207ENST00000471246 A0A087WWC5 75 aa-0.33□□□□□ -2.46
UBXN4-207ENST00000471246 TGIF2-C20orf24A0A0A6YYL0 155 aa-0.33□□□□□ -2.46
UBXN4-207ENST00000471246 IQCF6A8MYZ5 107 aa-0.33□□□□□ -2.46
UBXN4-207ENST00000471246 LRRN3E7EW58 273 aa-0.33□□□□□ -2.46
UBXN4-207ENST00000471246 G3V318 75 aa-0.33□□□□□ -2.46
UBXN4-207ENST00000471246 PSMD12O00232 456 aaPredicted RBP-0.33□□□□□ -2.46
UBXN4-207ENST00000471246 MRPL33O75394 65 aaKnown RBP-0.33□□□□□ -2.46
UBXN4-207ENST00000471246 DCTN3O75935 186 aa-0.33□□□□□ -2.46
UBXN4-207ENST00000471246 OR7C1O76099 320 aaPredicted RBP-0.33□□□□□ -2.46
UBXN4-207ENST00000471246 DEXIO95424 95 aa-0.33□□□□□ -2.46
UBXN4-207ENST00000471246 CRYZL1O95825 349 aa-0.33□□□□□ -2.46
UBXN4-207ENST00000471246 CD3DP04234 171 aa-0.33□□□□□ -2.46
UBXN4-207ENST00000471246 ISG15P05161 165 aa-0.33□□□□□ -2.46
UBXN4-207ENST00000471246 OCM2P0CE71 109 aa-0.33□□□□□ -2.46
UBXN4-207ENST00000471246 CASP1P29466 404 aa-0.33□□□□□ -2.46
UBXN4-207ENST00000471246 ERP29P30040 261 aaKnown RBP-0.33□□□□□ -2.46
UBXN4-207ENST00000471246 CRYBA4P53673 196 aa-0.33□□□□□ -2.46
UBXN4-207ENST00000471246 CAV3P56539 151 aa-0.33□□□□□ -2.46
UBXN4-207ENST00000471246 NDUFA6P56556 154 aa-0.33□□□□□ -2.46
UBXN4-207ENST00000471246 DEFB131AP59861 70 aa-0.33□□□□□ -2.46
UBXN4-207ENST00000471246 PSME3P61289 254 aa-0.33□□□□□ -2.46
UBXN4-207ENST00000471246 ERVS71-1P61550 626 aa-0.33□□□□□ -2.46
UBXN4-207ENST00000471246 DHRS4L2Q6PKH6 230 aa-0.33□□□□□ -2.46
UBXN4-207ENST00000471246 FAM151BQ6UXP7 276 aa-0.33□□□□□ -2.46
UBXN4-207ENST00000471246 WFDC13Q8IUB5 93 aa-0.33□□□□□ -2.46
UBXN4-207ENST00000471246 FAM9CQ8IZT9 166 aa-0.33□□□□□ -2.46
UBXN4-207ENST00000471246 C20orf197Q8N268 126 aa-0.33□□□□□ -2.46
UBXN4-207ENST00000471246 NUP35Q8NFH5 326 aa-0.33□□□□□ -2.46
UBXN4-207ENST00000471246 OR8J3Q8NGG0 315 aa-0.33□□□□□ -2.46
UBXN4-207ENST00000471246 OR9Q1Q8NGQ5 310 aa-0.33□□□□□ -2.46
UBXN4-207ENST00000471246 MCEEQ96PE7 176 aa-0.33□□□□□ -2.46
UBXN4-207ENST00000471246 WFDC6Q9BQY6 131 aa-0.33□□□□□ -2.46
UBXN4-207ENST00000471246 PRADC1Q9BSG0 188 aa-0.33□□□□□ -2.46
UBXN4-207ENST00000471246 CCDC94Q9BW85 323 aaPredicted RBP-0.33□□□□□ -2.46
UBXN4-207ENST00000471246 TMEM242Q9NWH2 141 aa-0.33□□□□□ -2.46
UBXN4-207ENST00000471246 IDI2-AS1Q9NZ38 188 aa-0.33□□□□□ -2.46
UBXN4-207ENST00000471246 USE1Q9NZ43 259 aa-0.33□□□□□ -2.46
UBXN4-207ENST00000471246 PCTPQ9UKL6 214 aa-0.33□□□□□ -2.46
UBXN4-207ENST00000471246 NOSIPQ9Y314 301 aaKnown RBP-0.33□□□□□ -2.46
UBXN4-207ENST00000471246 RNF11Q9Y3C5 154 aa-0.33□□□□□ -2.46
UBXN4-207ENST00000471246 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP-0.34□□□□□ -2.46
UBXN4-207ENST00000471246 A0A0A6YYH2 397 aa-0.34□□□□□ -2.46
UBXN4-207ENST00000471246 DUXBA0A1W2PPF3 345 aa-0.34□□□□□ -2.46
UBXN4-207ENST00000471246 A6NJ64 397 aa-0.34□□□□□ -2.46
UBXN4-207ENST00000471246 FAM223BA6NKX1 122 aa-0.34□□□□□ -2.46
UBXN4-207ENST00000471246 C1orf196B1AJZ1 125 aa-0.34□□□□□ -2.46
UBXN4-207ENST00000471246 JMJD7-PLA2G4BH0Y9G9 81 aa-0.34□□□□□ -2.46
UBXN4-207ENST00000471246 M0QZ58 72 aa-0.34□□□□□ -2.46
UBXN4-207ENST00000471246 PIRO00625 290 aa-0.34□□□□□ -2.46
UBXN4-207ENST00000471246 SPINK4O60575 86 aa-0.34□□□□□ -2.46
UBXN4-207ENST00000471246 ATG12O94817 140 aa-0.34□□□□□ -2.46
UBXN4-207ENST00000471246 PPYP01298 95 aa-0.34□□□□□ -2.46
UBXN4-207ENST00000471246 MT-ATP8P03928 68 aa-0.34□□□□□ -2.46
UBXN4-207ENST00000471246 CD14P08571 375 aa-0.34□□□□□ -2.46
UBXN4-207ENST00000471246 TNP1P09430 55 aa-0.34□□□□□ -2.46
UBXN4-207ENST00000471246 RBP1P09455 135 aa-0.34□□□□□ -2.46
UBXN4-207ENST00000471246 PAEPP09466 180 aa-0.34□□□□□ -2.46
UBXN4-207ENST00000471246 COX7CP15954 63 aa-0.34□□□□□ -2.46
UBXN4-207ENST00000471246 CCL3L1P16619 93 aa-0.34□□□□□ -2.46
UBXN4-207ENST00000471246 SERPINB9P50453 376 aa-0.34□□□□□ -2.46
UBXN4-207ENST00000471246 TAS2R41P59536 307 aa-0.34□□□□□ -2.46
UBXN4-207ENST00000471246 ROMO1P60602 79 aa-0.34□□□□□ -2.46
UBXN4-207ENST00000471246 SPCS3P61009 180 aa-0.34□□□□□ -2.46
UBXN4-207ENST00000471246 PKIAP61925 76 aa-0.34□□□□□ -2.46
UBXN4-207ENST00000471246 RHOBP62745 196 aa-0.34□□□□□ -2.46
UBXN4-207ENST00000471246 OR8B8Q15620 311 aa-0.34□□□□□ -2.46
UBXN4-207ENST00000471246 DEFB110Q30KQ9 67 aa-0.34□□□□□ -2.46
UBXN4-207ENST00000471246 SPOPLQ6IQ16 392 aa-0.34□□□□□ -2.46
UBXN4-207ENST00000471246 ENHOQ6UWT2 76 aa-0.34□□□□□ -2.46
UBXN4-207ENST00000471246 C4orf22Q6V702 233 aa-0.34□□□□□ -2.46
UBXN4-207ENST00000471246 FAM223AQ8IWN6 122 aa-0.34□□□□□ -2.46
UBXN4-207ENST00000471246 OR6V1Q8N148 313 aa-0.34□□□□□ -2.46
UBXN4-207ENST00000471246 ZNF431Q8TF32 576 aaPredicted RBP-0.34□□□□□ -2.46
UBXN4-207ENST00000471246 ATP6V1G3Q96LB4 118 aa-0.34□□□□□ -2.46
UBXN4-207ENST00000471246 SPRR4Q96PI1 79 aa-0.34□□□□□ -2.46
UBXN4-207ENST00000471246 DSCR8Q96T75 97 aa-0.34□□□□□ -2.46
UBXN4-207ENST00000471246 NMNAT1Q9HAN9 279 aaPredicted RBP-0.34□□□□□ -2.46
UBXN4-207ENST00000471246 NOP10Q9NPE3 64 aaKnown RBP-0.34□□□□□ -2.46
UBXN4-207ENST00000471246 SS18L2Q9UHA2 77 aa-0.34□□□□□ -2.46
UBXN4-207ENST00000471246 HSPB8Q9UJY1 196 aa-0.34□□□□□ -2.46
UBXN4-207ENST00000471246 NOP16Q9Y3C1 178 aaKnown RBP-0.34□□□□□ -2.46
UBXN4-207ENST00000471246 hCG_1818297A0A087WSY0 165 aa-0.35□□□□□ -2.47
UBXN4-207ENST00000471246 GVQW2A0A096LPI5 108 aaPredicted RBP-0.35□□□□□ -2.47
UBXN4-207ENST00000471246 RBAKDNA6NC62 111 aa-0.35□□□□□ -2.47
UBXN4-207ENST00000471246 SMIM23A6NLE4 172 aa-0.35□□□□□ -2.47
UBXN4-207ENST00000471246 A8MT66 165 aa-0.35□□□□□ -2.47
UBXN4-207ENST00000471246 H0YGG7 62 aa-0.35□□□□□ -2.47
UBXN4-207ENST00000471246 CETN3O15182 167 aa-0.35□□□□□ -2.47
UBXN4-207ENST00000471246 TIMM17BO60830 172 aa-0.35□□□□□ -2.47
UBXN4-207ENST00000471246 TNNC2P02585 160 aa-0.35□□□□□ -2.47
UBXN4-207ENST00000471246 GYPAP02724 150 aa-0.35□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms