RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 PNRC1Q12796 327 aaPredicted RBP10.16□□□□□ -0.78
HDAC6-218ENST00000470942 CFAP161Q6P656 301 aa10.16□□□□□ -0.78
HDAC6-218ENST00000470942 C9orf163Q8N9P6 203 aa10.16□□□□□ -0.78
HDAC6-218ENST00000470942 CHAC1Q9BUX1 264 aa10.16□□□□□ -0.78
HDAC6-218ENST00000470942 D6R8Y8 96 aa10.15□□□□□ -0.78
HDAC6-218ENST00000470942 MT-ND4LP03901 98 aa10.15□□□□□ -0.78
HDAC6-218ENST00000470942 MRPL52Q86TS9 123 aaKnown RBP10.15□□□□□ -0.78
HDAC6-218ENST00000470942 LINC00528Q8N1L1 170 aa10.15□□□□□ -0.78
HDAC6-218ENST00000470942 C20orf78Q9BR46 151 aa10.15□□□□□ -0.78
HDAC6-218ENST00000470942 TRBV24-1A0A075B6N3 115 aa10.14□□□□□ -0.79
HDAC6-218ENST00000470942 LINC00959A0A1B0GUT2 108 aa10.14□□□□□ -0.79
HDAC6-218ENST00000470942 TNFRSF6BO95407 300 aa10.14□□□□□ -0.79
HDAC6-218ENST00000470942 SMAGPQ0VAQ4 97 aa10.14□□□□□ -0.79
HDAC6-218ENST00000470942 ATP5L2Q7Z4Y8 100 aa10.14□□□□□ -0.79
HDAC6-218ENST00000470942 ZNF664Q8N3J9 261 aa10.14□□□□□ -0.79
HDAC6-218ENST00000470942 ANAPC16Q96DE5 110 aa10.14□□□□□ -0.79
HDAC6-218ENST00000470942 CDC42SE2Q9NRR3 84 aa10.14□□□□□ -0.79
HDAC6-218ENST00000470942 CCL25O15444 150 aa10.13□□□□□ -0.79
HDAC6-218ENST00000470942 XCL1P47992 114 aa10.13□□□□□ -0.79
HDAC6-218ENST00000470942 CNBPP62633 177 aaKnown RBP10.13□□□□□ -0.79
HDAC6-218ENST00000470942 SS18Q15532 418 aa10.13□□□□□ -0.79
HDAC6-218ENST00000470942 C15orf56Q8N910 161 aa10.13□□□□□ -0.79
HDAC6-218ENST00000470942 CIRBP-AS1Q8TBR5 109 aa10.13□□□□□ -0.79
HDAC6-218ENST00000470942 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.12□□□□□ -0.79
HDAC6-218ENST00000470942 PPBPP02775 128 aa10.12□□□□□ -0.79
HDAC6-218ENST00000470942 PLA2G1BP04054 148 aaKnown RBP10.12□□□□□ -0.79
HDAC6-218ENST00000470942 IFITM2Q01629 132 aa10.12□□□□□ -0.79
HDAC6-218ENST00000470942 HIGD2BQ4VC39 106 aa10.12□□□□□ -0.79
HDAC6-218ENST00000470942 TMEM18Q96B42 140 aa10.12□□□□□ -0.79
HDAC6-218ENST00000470942 TCAPO15273 167 aa10.11□□□□□ -0.79
HDAC6-218ENST00000470942 NPYP01303 97 aa10.11□□□□□ -0.79
HDAC6-218ENST00000470942 RPL32P62910 135 aaKnown RBP10.11□□□□□ -0.79
HDAC6-218ENST00000470942 FOXI1Q12951 378 aa10.11□□□□□ -0.79
HDAC6-218ENST00000470942 SMIM2Q9BVW6 85 aa10.11□□□□□ -0.79
HDAC6-218ENST00000470942 UBE2D4Q9Y2X8 147 aa10.11□□□□□ -0.79
HDAC6-218ENST00000470942 IGHV3-64A0A075B6Q5 118 aa10.1□□□□□ -0.79
HDAC6-218ENST00000470942 SLPIP03973 132 aa10.1□□□□□ -0.79
HDAC6-218ENST00000470942 SDIM1Q6ZPB5 146 aa10.1□□□□□ -0.79
HDAC6-218ENST00000470942 TMEM136Q6ZRR5 245 aa10.1□□□□□ -0.79
HDAC6-218ENST00000470942 ORMDL3Q8N138 153 aa10.1□□□□□ -0.79
HDAC6-218ENST00000470942 PHOX2AO14813 284 aa10.09□□□□□ -0.79
HDAC6-218ENST00000470942 RNASE13Q5GAN3 156 aaKnown RBP10.09□□□□□ -0.79
HDAC6-218ENST00000470942 UQCC3Q6UW78 93 aa10.09□□□□□ -0.79
HDAC6-218ENST00000470942 PRELID3AQ96N28 172 aa10.09□□□□□ -0.79
HDAC6-218ENST00000470942 CSDC2Q9Y534 153 aaKnown RBP10.09□□□□□ -0.79
HDAC6-218ENST00000470942 DPH3Q96FX2 82 aa10.08□□□□□ -0.8
HDAC6-218ENST00000470942 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.08□□□□□ -0.8
HDAC6-218ENST00000470942 GVQW2A0A096LPI5 108 aaPredicted RBP10.07□□□□□ -0.8
HDAC6-218ENST00000470942 TMEM218A2RU14 115 aa10.07□□□□□ -0.8
HDAC6-218ENST00000470942 RPL39P62891 51 aaKnown RBP10.07□□□□□ -0.8
HDAC6-218ENST00000470942 CD164L2Q6UWJ8 174 aa10.07□□□□□ -0.8
HDAC6-218ENST00000470942 TIMM21Q9BVV7 248 aa10.07□□□□□ -0.8
HDAC6-218ENST00000470942 FLG2Q5D862 2391 aaPredicted RBP10.07□□□□□ -0.8
HDAC6-218ENST00000470942 TRAV13-1A0A0B4J241 112 aa10.06□□□□□ -0.8
HDAC6-218ENST00000470942 IGHV1-58A0A0C4DH39 117 aa10.06□□□□□ -0.8
HDAC6-218ENST00000470942 C1orf196B1AJZ1 125 aa10.06□□□□□ -0.8
HDAC6-218ENST00000470942 PANO1I0J062 215 aa10.06□□□□□ -0.8
HDAC6-218ENST00000470942 ADCYAP1P18509 176 aa10.06□□□□□ -0.8
HDAC6-218ENST00000470942 RAB5AP20339 215 aa10.06□□□□□ -0.8
HDAC6-218ENST00000470942 Q6ZUT4 128 aa10.06□□□□□ -0.8
HDAC6-218ENST00000470942 LOC389332A0A1B0GUA5 103 aa10.05□□□□□ -0.8
HDAC6-218ENST00000470942 MALP21145 153 aa10.04□□□□□ -0.8
HDAC6-218ENST00000470942 LINC00526Q96FQ7 95 aa10.04□□□□□ -0.8
HDAC6-218ENST00000470942 ZNF561-AS1K7EIQ3 104 aa10.03□□□□□ -0.8
HDAC6-218ENST00000470942 COX7A2LO14548 114 aa10.03□□□□□ -0.8
HDAC6-218ENST00000470942 CHTF8P0CG12 524 aa10.03□□□□□ -0.8
HDAC6-218ENST00000470942 COX6A2Q02221 97 aa10.03□□□□□ -0.8
HDAC6-218ENST00000470942 COMMD7Q86VX2 200 aa10.03□□□□□ -0.8
HDAC6-218ENST00000470942 IMMP2LQ96T52 175 aa10.03□□□□□ -0.8
HDAC6-218ENST00000470942 OPRPNQ99935 248 aaPredicted RBP10.03□□□□□ -0.8
HDAC6-218ENST00000470942 CTDSP1Q9GZU7 261 aa10.03□□□□□ -0.8
HDAC6-218ENST00000470942 MAP1LC3AQ9H492 121 aa10.03□□□□□ -0.8
HDAC6-218ENST00000470942 SPANXA1Q9NS26 97 aa10.03□□□□□ -0.8
HDAC6-218ENST00000470942 LAMTOR2Q9Y2Q5 125 aa10.03□□□□□ -0.8
HDAC6-218ENST00000470942 CIRBPQ14011 172 aaKnown RBP10.02□□□□□ -0.81
HDAC6-218ENST00000470942 SEC11CQ9BY50 192 aa10.02□□□□□ -0.81
HDAC6-218ENST00000470942 PRSS47A8MTI9 375 aa10.01□□□□□ -0.81
HDAC6-218ENST00000470942 C5orf38Q86SI9 138 aa10.01□□□□□ -0.81
HDAC6-218ENST00000470942 PRSS3P2Q8NHM4 247 aa10.01□□□□□ -0.81
HDAC6-218ENST00000470942 MYCBP2O75592 4640 aa10.01□□□□□ -0.81
HDAC6-218ENST00000470942 IGKV2-24A0A0C4DH68 120 aa10□□□□□ -0.81
HDAC6-218ENST00000470942 IFI27P40305 119 aaPredicted RBP10□□□□□ -0.81
HDAC6-218ENST00000470942 RPL37AP61513 92 aaKnown RBP10□□□□□ -0.81
HDAC6-218ENST00000470942 MRPS36P82909 103 aaKnown RBP10□□□□□ -0.81
HDAC6-218ENST00000470942 Q8N8P6 123 aa10□□□□□ -0.81
HDAC6-218ENST00000470942 SPACA4Q8TDM5 124 aa10□□□□□ -0.81
HDAC6-218ENST00000470942 CARD19Q96LW7 228 aa10□□□□□ -0.81
HDAC6-218ENST00000470942 DMBT1Q9UGM3 2413 aaPredicted RBP9.99□□□□□ -0.81
HDAC6-218ENST00000470942 A0A087WYN8 130 aa9.99□□□□□ -0.81
HDAC6-218ENST00000470942 IFITM10A6NMD0 228 aa9.99□□□□□ -0.81
HDAC6-218ENST00000470942 SYCNQ0VAF6 134 aa9.99□□□□□ -0.81
HDAC6-218ENST00000470942 MAJINQ3KP22 176 aa9.99□□□□□ -0.81
HDAC6-218ENST00000470942 FAM104AQ969W3 186 aa9.99□□□□□ -0.81
HDAC6-218ENST00000470942 IGLV4-69A0A075B6H9 119 aa9.98□□□□□ -0.81
HDAC6-218ENST00000470942 APOMO95445 188 aa9.98□□□□□ -0.81
HDAC6-218ENST00000470942 S100PP25815 95 aa9.98□□□□□ -0.81
HDAC6-218ENST00000470942 KRTAP10-4P60372 401 aaPredicted RBP9.98□□□□□ -0.81
HDAC6-218ENST00000470942 TRAV9-1A0A075B6T8 112 aa9.97□□□□□ -0.81
HDAC6-218ENST00000470942 KIAA1644Q3SXP7 199 aa9.97□□□□□ -0.81
HDAC6-218ENST00000470942 PKIGQ9Y2B9 76 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms