RNA–Protein interactions for RNA: ENST00000470458.1

RFTN1-208, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 4

Gene RFTN1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-208ENST00000470458 IGKV2-29A2NJV5 120 aaPredicted RBP7.12□□□□□ -1.27
RFTN1-208ENST00000470458 TMEM218A2RU14 115 aa7.12□□□□□ -1.27
RFTN1-208ENST00000470458 RPS10P46783 165 aaKnown RBP7.12□□□□□ -1.27
RFTN1-208ENST00000470458 XGP55808 180 aa7.12□□□□□ -1.27
RFTN1-208ENST00000470458 TMEM136Q6ZRR5 245 aa7.12□□□□□ -1.27
RFTN1-208ENST00000470458 Q6ZSA8 131 aa7.12□□□□□ -1.27
RFTN1-208ENST00000470458 C9orf163Q8N9P6 203 aa7.12□□□□□ -1.27
RFTN1-208ENST00000470458 CHCHD10Q8WYQ3 142 aaPredicted RBP7.12□□□□□ -1.27
RFTN1-208ENST00000470458 CDC42SE2Q9NRR3 84 aa7.12□□□□□ -1.27
RFTN1-208ENST00000470458 LINC01549A6NIU2 74 aa7.11□□□□□ -1.27
RFTN1-208ENST00000470458 D6R8Y8 96 aa7.11□□□□□ -1.27
RFTN1-208ENST00000470458 WFDC2Q14508 124 aa7.11□□□□□ -1.27
RFTN1-208ENST00000470458 KRTAP26-1Q6PEX3 210 aa7.11□□□□□ -1.27
RFTN1-208ENST00000470458 CD164L2Q6UWJ8 174 aa7.11□□□□□ -1.27
RFTN1-208ENST00000470458 PRELID3AQ96N28 172 aa7.11□□□□□ -1.27
RFTN1-208ENST00000470458 SMIM2Q9BVW6 85 aa7.11□□□□□ -1.27
RFTN1-208ENST00000470458 MAP1LC3AQ9H492 121 aa7.11□□□□□ -1.27
RFTN1-208ENST00000470458 SPANXA1Q9NS26 97 aa7.11□□□□□ -1.27
RFTN1-208ENST00000470458 KIAA1109Q2LD37 5005 aa7.11□□□□□ -1.27
RFTN1-208ENST00000470458 IGHV3-64A0A075B6Q5 118 aa7.1□□□□□ -1.27
RFTN1-208ENST00000470458 IGHV1-58A0A0C4DH39 117 aa7.1□□□□□ -1.27
RFTN1-208ENST00000470458 IGKV3OR2-268A0A0C4DH90 116 aa7.1□□□□□ -1.27
RFTN1-208ENST00000470458 LINC00959A0A1B0GUT2 108 aa7.1□□□□□ -1.27
RFTN1-208ENST00000470458 GAGE12HA6NDE8 117 aa7.1□□□□□ -1.27
RFTN1-208ENST00000470458 PRSS47A8MTI9 375 aa7.1□□□□□ -1.27
RFTN1-208ENST00000470458 APOMO95445 188 aa7.1□□□□□ -1.27
RFTN1-208ENST00000470458 PRSS1P07477 247 aa7.1□□□□□ -1.27
RFTN1-208ENST00000470458 CHAC1Q9BUX1 264 aa7.1□□□□□ -1.27
RFTN1-208ENST00000470458 DYNC1H1Q14204 4646 aaKnown RBP7.1□□□□□ -1.27
RFTN1-208ENST00000470458 SMKR1H3BMG3 65 aa7.09□□□□□ -1.27
RFTN1-208ENST00000470458 NPSP0C0P6 89 aa7.09□□□□□ -1.27
RFTN1-208ENST00000470458 FUSP35637 526 aaKnown RBP eCLIP7.09□□□□□ -1.27
RFTN1-208ENST00000470458 NDUFA5Q16718 116 aa7.09□□□□□ -1.27
RFTN1-208ENST00000470458 ORMDL2Q53FV1 153 aa7.09□□□□□ -1.27
RFTN1-208ENST00000470458 PAPPA-AS1Q5QFB9 102 aa7.09□□□□□ -1.27
RFTN1-208ENST00000470458 LINC00474Q9P2X8 69 aa7.09□□□□□ -1.27
RFTN1-208ENST00000470458 F8WDY8 70 aa7.08□□□□□ -1.28
RFTN1-208ENST00000470458 ZNF561-AS1K7EIQ3 104 aa7.08□□□□□ -1.28
RFTN1-208ENST00000470458 MALP21145 153 aa7.08□□□□□ -1.28
RFTN1-208ENST00000470458 IFI27P40305 119 aaPredicted RBP7.08□□□□□ -1.28
RFTN1-208ENST00000470458 MRPS36P82909 103 aaKnown RBP7.08□□□□□ -1.28
RFTN1-208ENST00000470458 RHEBQ15382 184 aa7.08□□□□□ -1.28
RFTN1-208ENST00000470458 DEFB104AQ8WTQ1 72 aa7.08□□□□□ -1.28
RFTN1-208ENST00000470458 DPH3Q96FX2 82 aa7.08□□□□□ -1.28
RFTN1-208ENST00000470458 NXT2Q9NPJ8 142 aaKnown RBP7.08□□□□□ -1.28
RFTN1-208ENST00000470458 UBE2D4Q9Y2X8 147 aa7.08□□□□□ -1.28
RFTN1-208ENST00000470458 GVQW2A0A096LPI5 108 aaPredicted RBP7.07□□□□□ -1.28
RFTN1-208ENST00000470458 GAS8-AS1O95177 125 aa7.07□□□□□ -1.28
RFTN1-208ENST00000470458 XCL1P47992 114 aa7.07□□□□□ -1.28
RFTN1-208ENST00000470458 Q5VSD8 79 aa7.07□□□□□ -1.28
RFTN1-208ENST00000470458 COMMD7Q86VX2 200 aa7.07□□□□□ -1.28
RFTN1-208ENST00000470458 PYGO1Q9Y3Y4 419 aa7.07□□□□□ -1.28
RFTN1-208ENST00000470458 HERC2O95714 4834 aa7.07□□□□□ -1.28
RFTN1-208ENST00000470458 COX7A2LO14548 114 aa7.06□□□□□ -1.28
RFTN1-208ENST00000470458 NPYP01303 97 aa7.06□□□□□ -1.28
RFTN1-208ENST00000470458 MT-ND6P03923 174 aa7.06□□□□□ -1.28
RFTN1-208ENST00000470458 IFITM2Q01629 132 aa7.06□□□□□ -1.28
RFTN1-208ENST00000470458 FOXI1Q12951 378 aa7.06□□□□□ -1.28
RFTN1-208ENST00000470458 Q6ZN92 141 aa7.06□□□□□ -1.28
RFTN1-208ENST00000470458 Q8N8P6 123 aa7.06□□□□□ -1.28
RFTN1-208ENST00000470458 INAFM2P0DMQ5 153 aa7.05□□□□□ -1.28
RFTN1-208ENST00000470458 C2orf88Q9BSF0 95 aa7.05□□□□□ -1.28
RFTN1-208ENST00000470458 GNB1LQ9BYB4 327 aa7.05□□□□□ -1.28
RFTN1-208ENST00000470458 LRP1BQ9NZR2 4599 aa7.05□□□□□ -1.28
RFTN1-208ENST00000470458 SEC11AP67812 179 aa7.04□□□□□ -1.28
RFTN1-208ENST00000470458 C10orf91Q5T1B1 145 aa7.04□□□□□ -1.28
RFTN1-208ENST00000470458 SDIM1Q6ZPB5 146 aa7.04□□□□□ -1.28
RFTN1-208ENST00000470458 FAM30AQ9NZY2 134 aa7.04□□□□□ -1.28
RFTN1-208ENST00000470458 CYSLTR1Q9Y271 337 aa7.04□□□□□ -1.28
RFTN1-208ENST00000470458 TRAV13-1A0A0B4J241 112 aa7.03□□□□□ -1.28
RFTN1-208ENST00000470458 SNAPINO95295 136 aa7.03□□□□□ -1.28
RFTN1-208ENST00000470458 SMR3BP02814 79 aaPredicted RBP7.03□□□□□ -1.28
RFTN1-208ENST00000470458 SCXQ7RTU7 201 aa7.03□□□□□ -1.28
RFTN1-208ENST00000470458 C15orf56Q8N910 161 aa7.03□□□□□ -1.28
RFTN1-208ENST00000470458 OR10D4PQ8NGN7 298 aa7.03□□□□□ -1.28
RFTN1-208ENST00000470458 CIRBP-AS1Q8TBR5 109 aa7.03□□□□□ -1.28
RFTN1-208ENST00000470458 TMEM141Q96I45 108 aa7.03□□□□□ -1.28
RFTN1-208ENST00000470458 CARHSP1Q9Y2V2 147 aaKnown RBP7.03□□□□□ -1.28
RFTN1-208ENST00000470458 RYR1P21817 5038 aa7.02□□□□□ -1.29
RFTN1-208ENST00000470458 TGIF2-C20orf24A0A0A6YYL0 155 aa7.02□□□□□ -1.29
RFTN1-208ENST00000470458 LOC389332A0A1B0GUA5 103 aa7.02□□□□□ -1.29
RFTN1-208ENST00000470458 TEX43Q6ZNM6 134 aa7.02□□□□□ -1.29
RFTN1-208ENST00000470458 LINC00528Q8N1L1 170 aa7.02□□□□□ -1.29
RFTN1-208ENST00000470458 SVBPQ8N300 66 aa7.02□□□□□ -1.29
RFTN1-208ENST00000470458 C2orf48Q96LS8 159 aa7.02□□□□□ -1.29
RFTN1-208ENST00000470458 VCX2Q9H322 139 aa7.02□□□□□ -1.29
RFTN1-208ENST00000470458 IFITM10A6NMD0 228 aa7.01□□□□□ -1.29
RFTN1-208ENST00000470458 ADCYAP1P18509 176 aa7.01□□□□□ -1.29
RFTN1-208ENST00000470458 SYCNQ0VAF6 134 aa7.01□□□□□ -1.29
RFTN1-208ENST00000470458 CIRBPQ14011 172 aaKnown RBP7.01□□□□□ -1.29
RFTN1-208ENST00000470458 LINC01620Q4KN68 170 aa7.01□□□□□ -1.29
RFTN1-208ENST00000470458 LINC01561Q8N1V8 128 aa7.01□□□□□ -1.29
RFTN1-208ENST00000470458 PRSS3P2Q8NHM4 247 aa7.01□□□□□ -1.29
RFTN1-208ENST00000470458 CARD19Q96LW7 228 aa7.01□□□□□ -1.29
RFTN1-208ENST00000470458 RPS10P5Q9NQ39 176 aa7.01□□□□□ -1.29
RFTN1-208ENST00000470458 DNAH5Q8TE73 4624 aa7□□□□□ -1.29
RFTN1-208ENST00000470458 IGLV4-69A0A075B6H9 119 aa7□□□□□ -1.29
RFTN1-208ENST00000470458 RPL39P62891 51 aaKnown RBP7□□□□□ -1.29
RFTN1-208ENST00000470458 RNF151Q2KHN1 245 aa7□□□□□ -1.29
RFTN1-208ENST00000470458 HIGD2BQ4VC39 106 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms