RNA–Protein interactions for RNA: ENST00000470115.1

GTF3C2-209, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-209ENST00000470115 D6R8Y8 96 aa10.61□□□□□ -0.71
GTF3C2-209ENST00000470115 PLA2G1BP04054 148 aaKnown RBP10.61□□□□□ -0.71
GTF3C2-209ENST00000470115 DGAT2L7PQ6IED9 249 aa10.61□□□□□ -0.71
GTF3C2-209ENST00000470115 PPP1R17O96001 155 aa10.6□□□□□ -0.71
GTF3C2-209ENST00000470115 PMCHP20382 165 aa10.6□□□□□ -0.71
GTF3C2-209ENST00000470115 CIRBP-AS1Q8TBR5 109 aa10.6□□□□□ -0.71
GTF3C2-209ENST00000470115 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.59□□□□□ -0.71
GTF3C2-209ENST00000470115 TGIF2-C20orf24A0A0A6YYL0 155 aa10.59□□□□□ -0.71
GTF3C2-209ENST00000470115 IGKV2-29A2NJV5 120 aaPredicted RBP10.59□□□□□ -0.71
GTF3C2-209ENST00000470115 ORMDL3Q8N138 153 aa10.59□□□□□ -0.71
GTF3C2-209ENST00000470115 C9orf163Q8N9P6 203 aa10.59□□□□□ -0.71
GTF3C2-209ENST00000470115 IGKV3OR2-268A0A0C4DH90 116 aa10.58□□□□□ -0.72
GTF3C2-209ENST00000470115 TRBV6-5A0A0K0K1A5 114 aa10.58□□□□□ -0.72
GTF3C2-209ENST00000470115 APCSP02743 223 aa10.58□□□□□ -0.72
GTF3C2-209ENST00000470115 PPBPP02775 128 aa10.58□□□□□ -0.72
GTF3C2-209ENST00000470115 AMMECR1LQ6DCA0 310 aa10.58□□□□□ -0.72
GTF3C2-209ENST00000470115 RNASEKQ6P5S7 137 aaKnown RBP10.58□□□□□ -0.72
GTF3C2-209ENST00000470115 TMEM136Q6ZRR5 245 aa10.58□□□□□ -0.72
GTF3C2-209ENST00000470115 hDV102S1A0JD36 115 aa10.57□□□□□ -0.72
GTF3C2-209ENST00000470115 I3L3M4 83 aa10.57□□□□□ -0.72
GTF3C2-209ENST00000470115 TNFRSF6BO95407 300 aa10.57□□□□□ -0.72
GTF3C2-209ENST00000470115 SUMO2P61956 95 aaKnown RBP10.57□□□□□ -0.72
GTF3C2-209ENST00000470115 COX19Q49B96 90 aa10.57□□□□□ -0.72
GTF3C2-209ENST00000470115 CBLN2Q8IUK8 224 aa10.57□□□□□ -0.72
GTF3C2-209ENST00000470115 NRACQ8N912 160 aa10.57□□□□□ -0.72
GTF3C2-209ENST00000470115 PRELID3AQ96N28 172 aa10.57□□□□□ -0.72
GTF3C2-209ENST00000470115 GAGE12HA6NDE8 117 aa10.56□□□□□ -0.72
GTF3C2-209ENST00000470115 H7C423 109 aa10.56□□□□□ -0.72
GTF3C2-209ENST00000470115 NPYP01303 97 aa10.56□□□□□ -0.72
GTF3C2-209ENST00000470115 FGF6P10767 208 aa10.56□□□□□ -0.72
GTF3C2-209ENST00000470115 GNB1LQ9BYB4 327 aa10.56□□□□□ -0.72
GTF3C2-209ENST00000470115 SMCO4Q9NRQ5 59 aa10.56□□□□□ -0.72
GTF3C2-209ENST00000470115 VCYO14598 125 aa10.55□□□□□ -0.72
GTF3C2-209ENST00000470115 TSHBP01222 138 aa10.55□□□□□ -0.72
GTF3C2-209ENST00000470115 FCER1GP30273 86 aa10.55□□□□□ -0.72
GTF3C2-209ENST00000470115 KIAA1644Q3SXP7 199 aa10.55□□□□□ -0.72
GTF3C2-209ENST00000470115 SDIM1Q6ZPB5 146 aa10.55□□□□□ -0.72
GTF3C2-209ENST00000470115 MT-ND6P03923 174 aa10.54□□□□□ -0.72
GTF3C2-209ENST00000470115 POLR2KP53803 58 aaKnown RBP10.54□□□□□ -0.72
GTF3C2-209ENST00000470115 CNBPP62633 177 aaKnown RBP10.54□□□□□ -0.72
GTF3C2-209ENST00000470115 C20orf78Q9BR46 151 aa10.54□□□□□ -0.72
GTF3C2-209ENST00000470115 MRPL18Q9H0U6 180 aaKnown RBP10.54□□□□□ -0.72
GTF3C2-209ENST00000470115 TRBV24-1A0A075B6N3 115 aa10.53□□□□□ -0.72
GTF3C2-209ENST00000470115 LOC389332A0A1B0GUA5 103 aa10.53□□□□□ -0.72
GTF3C2-209ENST00000470115 PANO1I0J062 215 aa10.53□□□□□ -0.72
GTF3C2-209ENST00000470115 SLPIP03973 132 aa10.53□□□□□ -0.72
GTF3C2-209ENST00000470115 ESDP10768 282 aa10.53□□□□□ -0.72
GTF3C2-209ENST00000470115 FABP9Q0Z7S8 132 aa10.53□□□□□ -0.72
GTF3C2-209ENST00000470115 CHCHD10Q8WYQ3 142 aaPredicted RBP10.53□□□□□ -0.72
GTF3C2-209ENST00000470115 KIR2DL4Q99706 377 aa10.53□□□□□ -0.72
GTF3C2-209ENST00000470115 AP5S1Q9NUS5 200 aa10.53□□□□□ -0.72
GTF3C2-209ENST00000470115 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.53□□□□□ -0.72
GTF3C2-209ENST00000470115 TRBV27A0A0K0K1C4 114 aa10.52□□□□□ -0.73
GTF3C2-209ENST00000470115 PHOX2AO14813 284 aa10.52□□□□□ -0.73
GTF3C2-209ENST00000470115 KRTAP10-4P60372 401 aaPredicted RBP10.52□□□□□ -0.73
GTF3C2-209ENST00000470115 C15orf56Q8N910 161 aa10.52□□□□□ -0.73
GTF3C2-209ENST00000470115 MAP1LC3AQ9H492 121 aa10.52□□□□□ -0.73
GTF3C2-209ENST00000470115 LAMTOR2Q9Y2Q5 125 aa10.52□□□□□ -0.73
GTF3C2-209ENST00000470115 TRAPPC1Q9Y5R8 145 aa10.52□□□□□ -0.73
GTF3C2-209ENST00000470115 ZNF25P17030 456 aaPredicted RBP10.51□□□□□ -0.73
GTF3C2-209ENST00000470115 TMEM101Q96IK0 257 aa10.51□□□□□ -0.73
GTF3C2-209ENST00000470115 SMIM2Q9BVW6 85 aa10.51□□□□□ -0.73
GTF3C2-209ENST00000470115 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.5□□□□□ -0.73
GTF3C2-209ENST00000470115 CFAP161Q6P656 301 aa10.5□□□□□ -0.73
GTF3C2-209ENST00000470115 OR5A1Q8NGJ0 315 aa10.5□□□□□ -0.73
GTF3C2-209ENST00000470115 IGHV3-64A0A075B6Q5 118 aa10.49□□□□□ -0.73
GTF3C2-209ENST00000470115 RAB5AP20339 215 aa10.49□□□□□ -0.73
GTF3C2-209ENST00000470115 PKHD1L1Q86WI1 4243 aa10.48□□□□□ -0.73
GTF3C2-209ENST00000470115 LINC00959A0A1B0GUT2 108 aa10.48□□□□□ -0.73
GTF3C2-209ENST00000470115 J3QL48 77 aa10.48□□□□□ -0.73
GTF3C2-209ENST00000470115 TCAPO15273 167 aa10.48□□□□□ -0.73
GTF3C2-209ENST00000470115 SCO1O75880 301 aa10.48□□□□□ -0.73
GTF3C2-209ENST00000470115 RPL32P62910 135 aaKnown RBP10.48□□□□□ -0.73
GTF3C2-209ENST00000470115 HIGD2BQ4VC39 106 aa10.48□□□□□ -0.73
GTF3C2-209ENST00000470115 YPEL4Q96NS1 127 aa10.48□□□□□ -0.73
GTF3C2-209ENST00000470115 XCL1P47992 114 aa10.47□□□□□ -0.73
GTF3C2-209ENST00000470115 FOXI1Q12951 378 aa10.47□□□□□ -0.73
GTF3C2-209ENST00000470115 MRPL52Q86TS9 123 aaKnown RBP10.47□□□□□ -0.73
GTF3C2-209ENST00000470115 DPH3Q96FX2 82 aa10.47□□□□□ -0.73
GTF3C2-209ENST00000470115 CDC42SE2Q9NRR3 84 aa10.47□□□□□ -0.73
GTF3C2-209ENST00000470115 CCL25O15444 150 aa10.46□□□□□ -0.73
GTF3C2-209ENST00000470115 ATP6V1G1O75348 118 aa10.46□□□□□ -0.73
GTF3C2-209ENST00000470115 RPL37AP61513 92 aaKnown RBP10.46□□□□□ -0.73
GTF3C2-209ENST00000470115 CIRBPQ14011 172 aaKnown RBP10.46□□□□□ -0.73
GTF3C2-209ENST00000470115 ALKBH7Q9BT30 221 aaPredicted RBP10.46□□□□□ -0.73
GTF3C2-209ENST00000470115 LRP1Q07954 4544 aaKnown RBP10.46□□□□□ -0.74
GTF3C2-209ENST00000470115 KRTAP29-1A8MX34 341 aaPredicted RBP10.45□□□□□ -0.74
GTF3C2-209ENST00000470115 CHTF8P0CG12 524 aa10.45□□□□□ -0.74
GTF3C2-209ENST00000470115 ZNF664Q8N3J9 261 aa10.45□□□□□ -0.74
GTF3C2-209ENST00000470115 Q8N8P6 123 aa10.45□□□□□ -0.74
GTF3C2-209ENST00000470115 PRSS3P2Q8NHM4 247 aa10.45□□□□□ -0.74
GTF3C2-209ENST00000470115 TMEM18Q96B42 140 aa10.45□□□□□ -0.74
GTF3C2-209ENST00000470115 FAT3Q8TDW7 4589 aa10.44□□□□□ -0.74
GTF3C2-209ENST00000470115 GVQW2A0A096LPI5 108 aaPredicted RBP10.44□□□□□ -0.74
GTF3C2-209ENST00000470115 S100A1P23297 94 aa10.44□□□□□ -0.74
GTF3C2-209ENST00000470115 IFI27P40305 119 aaPredicted RBP10.44□□□□□ -0.74
GTF3C2-209ENST00000470115 SS18Q15532 418 aa10.44□□□□□ -0.74
GTF3C2-209ENST00000470115 NXT2Q9NPJ8 142 aaKnown RBP10.44□□□□□ -0.74
GTF3C2-209ENST00000470115 PRSS47A8MTI9 375 aa10.43□□□□□ -0.74
GTF3C2-209ENST00000470115 SMAGPQ0VAQ4 97 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms