RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 EIF4EBP3O60516 100 aaPredicted RBP6.99□□□□□ -1.29
LSM2-209ENST00000470083 UBE2BP63146 152 aa6.99□□□□□ -1.29
LSM2-209ENST00000470083 OR2D3Q8NGH3 330 aa6.99□□□□□ -1.29
LSM2-209ENST00000470083 TYMSOSQ8TAI1 123 aa6.99□□□□□ -1.29
LSM2-209ENST00000470083 INMT-MINDY4F8WBC2 141 aa6.98□□□□□ -1.29
LSM2-209ENST00000470083 MAP1LC3B2A6NCE7 125 aa6.97□□□□□ -1.29
LSM2-209ENST00000470083 M0QXV9 152 aa6.97□□□□□ -1.29
LSM2-209ENST00000470083 SSNA1O43805 119 aa6.97□□□□□ -1.29
LSM2-209ENST00000470083 KRTAP7-1Q8IUC3 87 aa6.97□□□□□ -1.29
LSM2-209ENST00000470083 GATD1Q8NB37 220 aa6.97□□□□□ -1.29
LSM2-209ENST00000470083 ENKURQ8TC29 256 aa6.97□□□□□ -1.29
LSM2-209ENST00000470083 IMMP2LQ96T52 175 aa6.97□□□□□ -1.29
LSM2-209ENST00000470083 MAP1LC3BQ9GZQ8 125 aa6.97□□□□□ -1.29
LSM2-209ENST00000470083 CDC42SE2Q9NRR3 84 aa6.97□□□□□ -1.29
LSM2-209ENST00000470083 KRTAP9-7A8MTY7 169 aa6.96□□□□□ -1.3
LSM2-209ENST00000470083 F2Z2F3 143 aa6.96□□□□□ -1.3
LSM2-209ENST00000470083 G3V3Q6 166 aa6.96□□□□□ -1.3
LSM2-209ENST00000470083 RPS20P60866 119 aaKnown RBP6.96□□□□□ -1.3
LSM2-209ENST00000470083 SPAG11BQ08648 103 aa6.96□□□□□ -1.3
LSM2-209ENST00000470083 MRPL35Q9NZE8 188 aaKnown RBP6.96□□□□□ -1.3
LSM2-209ENST00000470083 SCO2A0A1W2PP80 73 aa6.95□□□□□ -1.3
LSM2-209ENST00000470083 C1orf196B1AJZ1 125 aa6.95□□□□□ -1.3
LSM2-209ENST00000470083 TLX1NBP0CAT3 122 aa6.95□□□□□ -1.3
LSM2-209ENST00000470083 AKR1C8PQ5T2L2 129 aa6.95□□□□□ -1.3
LSM2-209ENST00000470083 XP32Q5T750 250 aa6.95□□□□□ -1.3
LSM2-209ENST00000470083 LINC00173Q6ZV60 143 aa6.95□□□□□ -1.3
LSM2-209ENST00000470083 MRPL52Q86TS9 123 aaKnown RBP6.95□□□□□ -1.3
LSM2-209ENST00000470083 RPL39LQ96EH5 51 aaKnown RBP6.95□□□□□ -1.3
LSM2-209ENST00000470083 SDHAF1A6NFY7 115 aa6.94□□□□□ -1.3
LSM2-209ENST00000470083 PAGE4O60829 102 aa6.94□□□□□ -1.3
LSM2-209ENST00000470083 F8WDY8 70 aa6.93□□□□□ -1.3
LSM2-209ENST00000470083 ASB16-AS1Q495Z4 193 aa6.93□□□□□ -1.3
LSM2-209ENST00000470083 RPL7L1Q6DKI1 246 aaKnown RBP6.93□□□□□ -1.3
LSM2-209ENST00000470083 LYZL1Q6UWQ5 148 aa6.93□□□□□ -1.3
LSM2-209ENST00000470083 MRAP2Q96G30 205 aa6.93□□□□□ -1.3
LSM2-209ENST00000470083 BORCS7-ASMTA0A0B4J1R7 106 aa6.92□□□□□ -1.3
LSM2-209ENST00000470083 XKRY2A2RUG3 117 aa6.92□□□□□ -1.3
LSM2-209ENST00000470083 I3L3M4 83 aa6.92□□□□□ -1.3
LSM2-209ENST00000470083 GAGE2EQ4V326 116 aa6.92□□□□□ -1.3
LSM2-209ENST00000470083 C5orf38Q86SI9 138 aa6.92□□□□□ -1.3
LSM2-209ENST00000470083 LINC00304Q8N9R0 145 aa6.92□□□□□ -1.3
LSM2-209ENST00000470083 OR10D4PQ8NGN7 298 aa6.92□□□□□ -1.3
LSM2-209ENST00000470083 KRTAP4-1Q9BYQ7 146 aa6.92□□□□□ -1.3
LSM2-209ENST00000470083 PPDPFQ9H3Y8 114 aa6.92□□□□□ -1.3
LSM2-209ENST00000470083 SMDT1Q9H4I9 107 aa6.92□□□□□ -1.3
LSM2-209ENST00000470083 GAGE2DQ9UEU5 116 aa6.92□□□□□ -1.3
LSM2-209ENST00000470083 NDUFA1O15239 70 aa6.91□□□□□ -1.3
LSM2-209ENST00000470083 PMCHP20382 165 aa6.91□□□□□ -1.3
LSM2-209ENST00000470083 DEFA1P59665 94 aa6.91□□□□□ -1.3
LSM2-209ENST00000470083 MARVELD1Q9BSK0 173 aa6.91□□□□□ -1.3
LSM2-209ENST00000470083 ALG5Q9Y673 324 aa6.91□□□□□ -1.3
LSM2-209ENST00000470083 NUPR1O60356 82 aa6.9□□□□□ -1.3
LSM2-209ENST00000470083 PFDN1O60925 122 aa6.9□□□□□ -1.3
LSM2-209ENST00000470083 TSHBP01222 138 aa6.9□□□□□ -1.3
LSM2-209ENST00000470083 IFNA1P01562 189 aa6.9□□□□□ -1.3
LSM2-209ENST00000470083 CTRLP40313 264 aa6.9□□□□□ -1.3
LSM2-209ENST00000470083 RPL35P42766 123 aaKnown RBP6.9□□□□□ -1.3
LSM2-209ENST00000470083 CTAG1AP78358 180 aa6.9□□□□□ -1.3
LSM2-209ENST00000470083 TMEM241Q24JQ0 296 aa6.9□□□□□ -1.3
LSM2-209ENST00000470083 KRTAP13-2Q52LG2 175 aa6.9□□□□□ -1.3
LSM2-209ENST00000470083 C10orf25Q5T742 122 aa6.9□□□□□ -1.3
LSM2-209ENST00000470083 TEX261Q6UWH6 196 aa6.9□□□□□ -1.3
LSM2-209ENST00000470083 TMUB2Q71RG4 321 aa6.9□□□□□ -1.3
LSM2-209ENST00000470083 C9orf62Q8N4C0 152 aa6.9□□□□□ -1.3
LSM2-209ENST00000470083 FAM210AQ96ND0 272 aa6.9□□□□□ -1.3
LSM2-209ENST00000470083 CNFNQ9BYD5 112 aa6.9□□□□□ -1.3
LSM2-209ENST00000470083 TRAV13-1A0A0B4J241 112 aa6.89□□□□□ -1.31
LSM2-209ENST00000470083 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.89□□□□□ -1.31
LSM2-209ENST00000470083 TWIST1Q15672 202 aa6.89□□□□□ -1.31
LSM2-209ENST00000470083 TMEM242Q9NWH2 141 aa6.89□□□□□ -1.31
LSM2-209ENST00000470083 C6orf48Q9UBA6 75 aa6.89□□□□□ -1.31
LSM2-209ENST00000470083 TRBV6-5A0A0K0K1A5 114 aa6.88□□□□□ -1.31
LSM2-209ENST00000470083 C7orf77A4D0Y5 90 aa6.88□□□□□ -1.31
LSM2-209ENST00000470083 RPL28P46779 137 aaKnown RBP6.88□□□□□ -1.31
LSM2-209ENST00000470083 UNQ6190/PRO20217Q6UXQ8 127 aa6.88□□□□□ -1.31
LSM2-209ENST00000470083 SVIPQ8NHG7 77 aa6.88□□□□□ -1.31
LSM2-209ENST00000470083 ORAOV1Q8WV07 137 aa6.88□□□□□ -1.31
LSM2-209ENST00000470083 CTDSP1Q9GZU7 261 aa6.88□□□□□ -1.31
LSM2-209ENST00000470083 CFC1BP0CG36 223 aa6.87□□□□□ -1.31
LSM2-209ENST00000470083 ANAPC11Q9NYG5 84 aa6.87□□□□□ -1.31
LSM2-209ENST00000470083 CSDC2Q9Y534 153 aaKnown RBP6.87□□□□□ -1.31
LSM2-209ENST00000470083 CENPWQ5EE01 88 aa6.86□□□□□ -1.31
LSM2-209ENST00000470083 RNASE13Q5GAN3 156 aaKnown RBP6.86□□□□□ -1.31
LSM2-209ENST00000470083 C9orf129Q5T035 196 aaKnown RBP6.86□□□□□ -1.31
LSM2-209ENST00000470083 LINC00337Q8N6G1 96 aa6.86□□□□□ -1.31
LSM2-209ENST00000470083 RNASE7Q9H1E1 156 aaKnown RBP6.86□□□□□ -1.31
LSM2-209ENST00000470083 SEC61BP60468 96 aaKnown RBP6.85□□□□□ -1.31
LSM2-209ENST00000470083 LINC00242Q5T6M2 205 aa6.85□□□□□ -1.31
LSM2-209ENST00000470083 SMIM15Q7Z3B0 74 aa6.85□□□□□ -1.31
LSM2-209ENST00000470083 NDUFC2-KCTD14E9PQ53 114 aa6.84□□□□□ -1.31
LSM2-209ENST00000470083 BCE1O60756 84 aa6.84□□□□□ -1.31
LSM2-209ENST00000470083 UPK1BO75841 260 aa6.84□□□□□ -1.31
LSM2-209ENST00000470083 FOXA3P55318 350 aaPredicted RBP6.84□□□□□ -1.31
LSM2-209ENST00000470083 FAM229BQ4G0N7 80 aa6.84□□□□□ -1.31
LSM2-209ENST00000470083 SFT2D1Q8WV19 159 aa6.84□□□□□ -1.31
LSM2-209ENST00000470083 C11orf52Q96A22 123 aa6.84□□□□□ -1.31
LSM2-209ENST00000470083 SMIM12Q96EX1 92 aa6.84□□□□□ -1.31
LSM2-209ENST00000470083 ST20Q9HBF5 79 aa6.84□□□□□ -1.31
LSM2-209ENST00000470083 UBE2D4Q9Y2X8 147 aa6.84□□□□□ -1.31
LSM2-209ENST00000470083 TRBV27A0A0K0K1C4 114 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms