RNA–Protein interactions for RNA: ENST00000469670.1

TTC28-205, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-205ENST00000469670 CAMK2N2Q96S95 79 aa10.99□□□□□ -0.65
TTC28-205ENST00000469670 UMAD1C9J7I0 102 aa10.98□□□□□ -0.65
TTC28-205ENST00000469670 ARPC5O15511 151 aa10.98□□□□□ -0.65
TTC28-205ENST00000469670 CNFNQ9BYD5 112 aa10.98□□□□□ -0.65
TTC28-205ENST00000469670 I3L3M4 83 aa10.97□□□□□ -0.65
TTC28-205ENST00000469670 KRTAP1-4P0C5Y4 121 aa10.97□□□□□ -0.65
TTC28-205ENST00000469670 MALP21145 153 aa10.97□□□□□ -0.65
TTC28-205ENST00000469670 SMIM12Q96EX1 92 aa10.97□□□□□ -0.65
TTC28-205ENST00000469670 CDC42SE2Q9NRR3 84 aa10.97□□□□□ -0.65
TTC28-205ENST00000469670 A0A087WZ39 114 aa10.96□□□□□ -0.65
TTC28-205ENST00000469670 RAB19A4D1S5 217 aa10.96□□□□□ -0.65
TTC28-205ENST00000469670 G3V3Q6 166 aa10.96□□□□□ -0.65
TTC28-205ENST00000469670 H2AFB1P0C5Y9 115 aa10.96□□□□□ -0.65
TTC28-205ENST00000469670 ESDP10768 282 aa10.96□□□□□ -0.65
TTC28-205ENST00000469670 PMCHP20382 165 aa10.96□□□□□ -0.65
TTC28-205ENST00000469670 GNG4P50150 75 aa10.96□□□□□ -0.65
TTC28-205ENST00000469670 UBE2D1P51668 147 aa10.95□□□□□ -0.66
TTC28-205ENST00000469670 CCL20P78556 96 aa10.95□□□□□ -0.66
TTC28-205ENST00000469670 OPRPNQ99935 248 aaPredicted RBP10.95□□□□□ -0.66
TTC28-205ENST00000469670 TRAV1-1A0A0B4J248 108 aa10.94□□□□□ -0.66
TTC28-205ENST00000469670 COX7A2LO14548 114 aa10.94□□□□□ -0.66
TTC28-205ENST00000469670 BCL2L11O43521 198 aa10.94□□□□□ -0.66
TTC28-205ENST00000469670 FOXA3P55318 350 aaPredicted RBP10.94□□□□□ -0.66
TTC28-205ENST00000469670 TEX261Q6UWH6 196 aa10.94□□□□□ -0.66
TTC28-205ENST00000469670 MRPL52Q86TS9 123 aaKnown RBP10.94□□□□□ -0.66
TTC28-205ENST00000469670 KRTAP11-1Q8IUC1 163 aa10.94□□□□□ -0.66
TTC28-205ENST00000469670 MRAP2Q96G30 205 aa10.94□□□□□ -0.66
TTC28-205ENST00000469670 C2orf48Q96LS8 159 aa10.94□□□□□ -0.66
TTC28-205ENST00000469670 MANBALQ9NQG1 85 aa10.94□□□□□ -0.66
TTC28-205ENST00000469670 GNG13Q9P2W3 67 aa10.94□□□□□ -0.66
TTC28-205ENST00000469670 RPL13AP40429 203 aaKnown RBP10.93□□□□□ -0.66
TTC28-205ENST00000469670 SMIM15Q7Z3B0 74 aa10.93□□□□□ -0.66
TTC28-205ENST00000469670 TSKUQ8WUA8 353 aa10.93□□□□□ -0.66
TTC28-205ENST00000469670 BIN3Q9NQY0 253 aa10.93□□□□□ -0.66
TTC28-205ENST00000469670 TSHBP01222 138 aa10.92□□□□□ -0.66
TTC28-205ENST00000469670 NUDT10Q8NFP7 164 aa10.92□□□□□ -0.66
TTC28-205ENST00000469670 NUDT11Q96G61 164 aa10.92□□□□□ -0.66
TTC28-205ENST00000469670 TMEM242Q9NWH2 141 aa10.92□□□□□ -0.66
TTC28-205ENST00000469670 TRBV6-5A0A0K0K1A5 114 aa10.91□□□□□ -0.66
TTC28-205ENST00000469670 C1orf196B1AJZ1 125 aa10.91□□□□□ -0.66
TTC28-205ENST00000469670 TRBV20OR9-2A0A075B6H5 130 aa10.9□□□□□ -0.66
TTC28-205ENST00000469670 RNF151Q2KHN1 245 aa10.9□□□□□ -0.66
TTC28-205ENST00000469670 AKAP14Q86UN6 197 aa10.9□□□□□ -0.66
TTC28-205ENST00000469670 FAM168BA1KXE4 195 aa10.89□□□□□ -0.67
TTC28-205ENST00000469670 SPAG11BQ08648 103 aa10.89□□□□□ -0.67
TTC28-205ENST00000469670 FAM210AQ96ND0 272 aa10.89□□□□□ -0.67
TTC28-205ENST00000469670 C5orf38Q86SI9 138 aa10.88□□□□□ -0.67
TTC28-205ENST00000469670 RPP21Q9H633 154 aaKnown RBP10.88□□□□□ -0.67
TTC28-205ENST00000469670 ST20Q9HBF5 79 aa10.88□□□□□ -0.67
TTC28-205ENST00000469670 C7orf77A4D0Y5 90 aa10.87□□□□□ -0.67
TTC28-205ENST00000469670 MED9Q9NWA0 146 aa10.87□□□□□ -0.67
TTC28-205ENST00000469670 TSPAN13O95857 204 aa10.86□□□□□ -0.67
TTC28-205ENST00000469670 ZNF345Q14585 488 aa10.86□□□□□ -0.67
TTC28-205ENST00000469670 FAM19A5Q7Z5A7 132 aaPredicted RBP10.86□□□□□ -0.67
TTC28-205ENST00000469670 RNASE7Q9H1E1 156 aaKnown RBP10.86□□□□□ -0.67
TTC28-205ENST00000469670 MRPL35Q9NZE8 188 aaKnown RBP10.86□□□□□ -0.67
TTC28-205ENST00000469670 CARHSP1Q9Y2V2 147 aaKnown RBP10.86□□□□□ -0.67
TTC28-205ENST00000469670 TRAV13-1A0A0B4J241 112 aa10.85□□□□□ -0.67
TTC28-205ENST00000469670 SMLR1H3BR10 107 aa10.85□□□□□ -0.67
TTC28-205ENST00000469670 PDE6DO43924 150 aa10.85□□□□□ -0.67
TTC28-205ENST00000469670 RNASE13Q5GAN3 156 aaKnown RBP10.85□□□□□ -0.67
TTC28-205ENST00000469670 IMMP2LQ96T52 175 aa10.85□□□□□ -0.67
TTC28-205ENST00000469670 POLR2KP53803 58 aaKnown RBP10.84□□□□□ -0.67
TTC28-205ENST00000469670 TRBV27A0A0K0K1C4 114 aa10.83□□□□□ -0.68
TTC28-205ENST00000469670 UBE2BP63146 152 aa10.83□□□□□ -0.68
TTC28-205ENST00000469670 OR10D4PQ8NGN7 298 aa10.83□□□□□ -0.68
TTC28-205ENST00000469670 CSDC2Q9Y534 153 aaKnown RBP10.83□□□□□ -0.68
TTC28-205ENST00000469670 TLX1NBP0CAT3 122 aa10.82□□□□□ -0.68
TTC28-205ENST00000469670 UBE2D4Q9Y2X8 147 aa10.82□□□□□ -0.68
TTC28-205ENST00000469670 KANTRA0A1W2PQU2 76 aa10.81□□□□□ -0.68
TTC28-205ENST00000469670 F8WDY8 70 aa10.81□□□□□ -0.68
TTC28-205ENST00000469670 K7EN84 100 aa10.81□□□□□ -0.68
TTC28-205ENST00000469670 KRTAP7-1Q8IUC3 87 aa10.81□□□□□ -0.68
TTC28-205ENST00000469670 TCTE3Q8IZS6 198 aa10.81□□□□□ -0.68
TTC28-205ENST00000469670 M0QXV9 152 aa10.8□□□□□ -0.68
TTC28-205ENST00000469670 NDUFA1O15239 70 aa10.8□□□□□ -0.68
TTC28-205ENST00000469670 SMAGPQ0VAQ4 97 aa10.8□□□□□ -0.68
TTC28-205ENST00000469670 GAGE2EQ4V326 116 aa10.8□□□□□ -0.68
TTC28-205ENST00000469670 C10orf25Q5T742 122 aa10.8□□□□□ -0.68
TTC28-205ENST00000469670 ORAOV1Q8WV07 137 aa10.8□□□□□ -0.68
TTC28-205ENST00000469670 GAGE2DQ9UEU5 116 aa10.8□□□□□ -0.68
TTC28-205ENST00000469670 TEX46H3BTG2 121 aa10.79□□□□□ -0.68
TTC28-205ENST00000469670 FCER1GP30273 86 aa10.79□□□□□ -0.68
TTC28-205ENST00000469670 Q6ZUT4 128 aa10.79□□□□□ -0.68
TTC28-205ENST00000469670 OCC1Q8TAD7 63 aa10.79□□□□□ -0.68
TTC28-205ENST00000469670 TMEM241Q24JQ0 296 aa10.78□□□□□ -0.68
TTC28-205ENST00000469670 UNQ6190/PRO20217Q6UXQ8 127 aa10.78□□□□□ -0.68
TTC28-205ENST00000469670 SMDT1Q9H4I9 107 aa10.78□□□□□ -0.68
TTC28-205ENST00000469670 C6orf48Q9UBA6 75 aa10.78□□□□□ -0.68
TTC28-205ENST00000469670 VCYO14598 125 aa10.77□□□□□ -0.69
TTC28-205ENST00000469670 MUC17Q685J3 4493 aa10.76□□□□□ -0.69
TTC28-205ENST00000469670 HMSDA8MTL9 139 aa10.76□□□□□ -0.69
TTC28-205ENST00000469670 GATCO43716 136 aaKnown RBP10.76□□□□□ -0.69
TTC28-205ENST00000469670 ZNF861PO60384 105 aa10.76□□□□□ -0.69
TTC28-205ENST00000469670 RAB4AP20338 218 aa10.75□□□□□ -0.69
TTC28-205ENST00000469670 TMEM191AQ9H0A3 160 aa10.75□□□□□ -0.69
TTC28-205ENST00000469670 A8MWL6 223 aa10.74□□□□□ -0.69
TTC28-205ENST00000469670 BORCS7Q96B45 105 aa10.74□□□□□ -0.69
TTC28-205ENST00000469670 IGHV3OR16-9A0A0B4J2B5 98 aa10.73□□□□□ -0.69
TTC28-205ENST00000469670 TIMM21Q9BVV7 248 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms