RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 ODF1Q14990 250 aa7.68□□□□□ -1.18
COL5A1-207ENST00000469093 MAJINQ3KP22 176 aa7.68□□□□□ -1.18
COL5A1-207ENST00000469093 HIGD2BQ4VC39 106 aa7.68□□□□□ -1.18
COL5A1-207ENST00000469093 V9GYV3 84 aa7.68□□□□□ -1.18
COL5A1-207ENST00000469093 LRP2P98164 4655 aa7.67□□□□□ -1.18
COL5A1-207ENST00000469093 IGKV2-24A0A0C4DH68 120 aa7.67□□□□□ -1.18
COL5A1-207ENST00000469093 IGKV3OR2-268A0A0C4DH90 116 aa7.67□□□□□ -1.18
COL5A1-207ENST00000469093 FAM231BA6NCW3 169 aa7.67□□□□□ -1.18
COL5A1-207ENST00000469093 RHEBQ15382 184 aa7.67□□□□□ -1.18
COL5A1-207ENST00000469093 C10orf91Q5T1B1 145 aa7.67□□□□□ -1.18
COL5A1-207ENST00000469093 SMIM15Q7Z3B0 74 aa7.67□□□□□ -1.18
COL5A1-207ENST00000469093 CTDSP1Q9GZU7 261 aa7.67□□□□□ -1.18
COL5A1-207ENST00000469093 NAT8BQ9UHF3 227 aa7.67□□□□□ -1.18
COL5A1-207ENST00000469093 HIGD1CA8MV81 97 aa7.66□□□□□ -1.18
COL5A1-207ENST00000469093 S100PP25815 95 aa7.66□□□□□ -1.18
COL5A1-207ENST00000469093 CTRLP40313 264 aa7.66□□□□□ -1.18
COL5A1-207ENST00000469093 PRR3P79522 188 aaKnown RBP7.66□□□□□ -1.18
COL5A1-207ENST00000469093 STPG4Q8N801 248 aa7.66□□□□□ -1.18
COL5A1-207ENST00000469093 GATD1Q8NB37 220 aa7.66□□□□□ -1.18
COL5A1-207ENST00000469093 CHCHD10Q8WYQ3 142 aaPredicted RBP7.66□□□□□ -1.18
COL5A1-207ENST00000469093 RPS10P5Q9NQ39 176 aa7.66□□□□□ -1.18
COL5A1-207ENST00000469093 GVQW2A0A096LPI5 108 aaPredicted RBP7.65□□□□□ -1.18
COL5A1-207ENST00000469093 KRTAP10-8P60410 259 aa7.65□□□□□ -1.18
COL5A1-207ENST00000469093 RIGQ13278 110 aa7.65□□□□□ -1.18
COL5A1-207ENST00000469093 TWIST1Q15672 202 aa7.65□□□□□ -1.18
COL5A1-207ENST00000469093 A0A096LNI7 61 aa7.64□□□□□ -1.19
COL5A1-207ENST00000469093 TRAV26-2A0A0B4J265 109 aa7.64□□□□□ -1.19
COL5A1-207ENST00000469093 A0A0J9YXV3 536 aa7.64□□□□□ -1.19
COL5A1-207ENST00000469093 A0A1B0GUT8 65 aa7.64□□□□□ -1.19
COL5A1-207ENST00000469093 SMIM27A0A1W2PRY6 76 aa7.64□□□□□ -1.19
COL5A1-207ENST00000469093 C7orf77A4D0Y5 90 aa7.64□□□□□ -1.19
COL5A1-207ENST00000469093 S100A8P05109 93 aa7.64□□□□□ -1.19
COL5A1-207ENST00000469093 AMMECR1LQ6DCA0 310 aa7.64□□□□□ -1.19
COL5A1-207ENST00000469093 CNFNQ9BYD5 112 aa7.64□□□□□ -1.19
COL5A1-207ENST00000469093 FOXA3P55318 350 aaPredicted RBP7.63□□□□□ -1.19
COL5A1-207ENST00000469093 FOXI1Q12951 378 aa7.63□□□□□ -1.19
COL5A1-207ENST00000469093 RNASEKQ6P5S7 137 aaKnown RBP7.63□□□□□ -1.19
COL5A1-207ENST00000469093 SPINK6Q6UWN8 80 aa7.63□□□□□ -1.19
COL5A1-207ENST00000469093 RPL39LQ96EH5 51 aaKnown RBP7.63□□□□□ -1.19
COL5A1-207ENST00000469093 IMMP2LQ96T52 175 aa7.63□□□□□ -1.19
COL5A1-207ENST00000469093 RNF213Q63HN8 5207 aa7.63□□□□□ -1.19
COL5A1-207ENST00000469093 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.62□□□□□ -1.19
COL5A1-207ENST00000469093 A0A1B0GW15 77 aa7.62□□□□□ -1.19
COL5A1-207ENST00000469093 IGKV2-29A2NJV5 120 aaPredicted RBP7.62□□□□□ -1.19
COL5A1-207ENST00000469093 H7C423 109 aa7.62□□□□□ -1.19
COL5A1-207ENST00000469093 NCR2O95944 276 aa7.62□□□□□ -1.19
COL5A1-207ENST00000469093 FGF6P10767 208 aa7.62□□□□□ -1.19
COL5A1-207ENST00000469093 SRSF9Q13242 221 aaKnown RBP eCLIP7.62□□□□□ -1.19
COL5A1-207ENST00000469093 NUP35Q8NFH5 326 aa7.62□□□□□ -1.19
COL5A1-207ENST00000469093 LINC00526Q96FQ7 95 aa7.61□□□□□ -1.19
COL5A1-207ENST00000469093 BTF3L4Q96K17 158 aa7.61□□□□□ -1.19
COL5A1-207ENST00000469093 TMEM242Q9NWH2 141 aa7.61□□□□□ -1.19
COL5A1-207ENST00000469093 LINC00474Q9P2X8 69 aa7.61□□□□□ -1.19
COL5A1-207ENST00000469093 TNXBP22105 4242 aa7.6□□□□□ -1.19
COL5A1-207ENST00000469093 TRAV9-1A0A075B6T8 112 aa7.6□□□□□ -1.19
COL5A1-207ENST00000469093 XCL1P47992 114 aa7.6□□□□□ -1.19
COL5A1-207ENST00000469093 HBBP68871 147 aa7.6□□□□□ -1.19
COL5A1-207ENST00000469093 REG3GQ6UW15 175 aa7.6□□□□□ -1.19
COL5A1-207ENST00000469093 ATP5L2Q7Z4Y8 100 aa7.6□□□□□ -1.19
COL5A1-207ENST00000469093 OR5A1Q8NGJ0 315 aa7.6□□□□□ -1.19
COL5A1-207ENST00000469093 LINC00959A0A1B0GUT2 108 aa7.59□□□□□ -1.19
COL5A1-207ENST00000469093 SDHAF1A6NFY7 115 aa7.59□□□□□ -1.19
COL5A1-207ENST00000469093 APCSP02743 223 aa7.59□□□□□ -1.19
COL5A1-207ENST00000469093 ZNF25P17030 456 aaPredicted RBP7.59□□□□□ -1.19
COL5A1-207ENST00000469093 CAMPP49913 170 aa7.59□□□□□ -1.19
COL5A1-207ENST00000469093 MRPL54Q6P161 138 aaKnown RBP7.59□□□□□ -1.19
COL5A1-207ENST00000469093 IGHV1-58A0A0C4DH39 117 aa7.58□□□□□ -1.2
COL5A1-207ENST00000469093 I3L3M4 83 aa7.58□□□□□ -1.2
COL5A1-207ENST00000469093 CCL25O15444 150 aa7.58□□□□□ -1.2
COL5A1-207ENST00000469093 S100A1P23297 94 aa7.58□□□□□ -1.2
COL5A1-207ENST00000469093 Q6ZRP5 223 aa7.58□□□□□ -1.2
COL5A1-207ENST00000469093 ESDP10768 282 aa7.57□□□□□ -1.2
COL5A1-207ENST00000469093 PMCHP20382 165 aa7.57□□□□□ -1.2
COL5A1-207ENST00000469093 TMEM101Q96IK0 257 aa7.57□□□□□ -1.2
COL5A1-207ENST00000469093 CARD19Q96LW7 228 aa7.57□□□□□ -1.2
COL5A1-207ENST00000469093 TMEM191AQ9H0A3 160 aa7.57□□□□□ -1.2
COL5A1-207ENST00000469093 SMCO4Q9NRQ5 59 aa7.57□□□□□ -1.2
COL5A1-207ENST00000469093 PKIGQ9Y2B9 76 aa7.57□□□□□ -1.2
COL5A1-207ENST00000469093 TRBV6-5A0A0K0K1A5 114 aa7.56□□□□□ -1.2
COL5A1-207ENST00000469093 GAS8-AS1O95177 125 aa7.56□□□□□ -1.2
COL5A1-207ENST00000469093 SYCNQ0VAF6 134 aa7.56□□□□□ -1.2
COL5A1-207ENST00000469093 COX19Q49B96 90 aa7.56□□□□□ -1.2
COL5A1-207ENST00000469093 CDC42SE2Q9NRR3 84 aa7.56□□□□□ -1.2
COL5A1-207ENST00000469093 ZNF561-AS1K7EIQ3 104 aa7.55□□□□□ -1.2
COL5A1-207ENST00000469093 ATP6V1G1O75348 118 aa7.55□□□□□ -1.2
COL5A1-207ENST00000469093 TSHBP01222 138 aa7.55□□□□□ -1.2
COL5A1-207ENST00000469093 PTTG1IPP53801 180 aa7.55□□□□□ -1.2
COL5A1-207ENST00000469093 SS18Q15532 418 aa7.55□□□□□ -1.2
COL5A1-207ENST00000469093 CD164L2Q6UWJ8 174 aa7.55□□□□□ -1.2
COL5A1-207ENST00000469093 A0A1B0GXF2 115 aa7.54□□□□□ -1.2
COL5A1-207ENST00000469093 A0A1W2PNN7 141 aa7.54□□□□□ -1.2
COL5A1-207ENST00000469093 MRPL52Q86TS9 123 aaKnown RBP7.54□□□□□ -1.2
COL5A1-207ENST00000469093 ZNF664Q8N3J9 261 aa7.54□□□□□ -1.2
COL5A1-207ENST00000469093 MRAP2Q96G30 205 aa7.54□□□□□ -1.2
COL5A1-207ENST00000469093 PPP1R17O96001 155 aa7.53□□□□□ -1.2
COL5A1-207ENST00000469093 POLR2KP53803 58 aaKnown RBP7.53□□□□□ -1.2
COL5A1-207ENST00000469093 GAGE2BQ13066 116 aa7.53□□□□□ -1.2
COL5A1-207ENST00000469093 AMN1Q8IY45 258 aa7.53□□□□□ -1.2
COL5A1-207ENST00000469093 ST20Q9HBF5 79 aa7.53□□□□□ -1.2
COL5A1-207ENST00000469093 IGLV4-69A0A075B6H9 119 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms