RNA–Protein interactions for RNA: ENST00000468963.1

SDCCAG3-209, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-209ENST00000468963 MAJINQ3KP22 176 aa9.3□□□□□ -0.92
SDCCAG3-209ENST00000468963 MRPL52Q86TS9 123 aaKnown RBP9.3□□□□□ -0.92
SDCCAG3-209ENST00000468963 BORCS7Q96B45 105 aa9.3□□□□□ -0.92
SDCCAG3-209ENST00000468963 TMEM101Q96IK0 257 aa9.3□□□□□ -0.92
SDCCAG3-209ENST00000468963 BTF3L4Q96K17 158 aa9.3□□□□□ -0.92
SDCCAG3-209ENST00000468963 SMIM7Q9BQ49 75 aa9.3□□□□□ -0.92
SDCCAG3-209ENST00000468963 EIF5A2Q9GZV4 153 aaKnown RBP9.3□□□□□ -0.92
SDCCAG3-209ENST00000468963 TMEM242Q9NWH2 141 aa9.3□□□□□ -0.92
SDCCAG3-209ENST00000468963 CCL25O15444 150 aa9.29□□□□□ -0.92
SDCCAG3-209ENST00000468963 SRP19P09132 144 aaKnown RBP9.29□□□□□ -0.92
SDCCAG3-209ENST00000468963 MRAP2Q96G30 205 aa9.29□□□□□ -0.92
SDCCAG3-209ENST00000468963 IGHV1-58A0A0C4DH39 117 aa9.28□□□□□ -0.92
SDCCAG3-209ENST00000468963 IGKV2-24A0A0C4DH68 120 aa9.28□□□□□ -0.92
SDCCAG3-209ENST00000468963 ZNF727A8MUV8 499 aa9.28□□□□□ -0.92
SDCCAG3-209ENST00000468963 AMN1Q8IY45 258 aa9.28□□□□□ -0.92
SDCCAG3-209ENST00000468963 STPG4Q8N801 248 aa9.28□□□□□ -0.92
SDCCAG3-209ENST00000468963 C7orf33Q8WU49 177 aa9.28□□□□□ -0.92
SDCCAG3-209ENST00000468963 LINC00526Q96FQ7 95 aa9.28□□□□□ -0.92
SDCCAG3-209ENST00000468963 hCG_2014768A0A024R1R8 64 aa9.27□□□□□ -0.93
SDCCAG3-209ENST00000468963 A0A096LNI7 61 aa9.27□□□□□ -0.93
SDCCAG3-209ENST00000468963 VCYO14598 125 aa9.27□□□□□ -0.93
SDCCAG3-209ENST00000468963 SS18Q15532 418 aa9.27□□□□□ -0.93
SDCCAG3-209ENST00000468963 CD164L2Q6UWJ8 174 aa9.27□□□□□ -0.93
SDCCAG3-209ENST00000468963 ZNF664Q8N3J9 261 aa9.27□□□□□ -0.93
SDCCAG3-209ENST00000468963 NUP35Q8NFH5 326 aa9.27□□□□□ -0.93
SDCCAG3-209ENST00000468963 V9GYV3 84 aa9.27□□□□□ -0.93
SDCCAG3-209ENST00000468963 C7orf77A4D0Y5 90 aa9.25□□□□□ -0.93
SDCCAG3-209ENST00000468963 SMKR1H3BMG3 65 aa9.25□□□□□ -0.93
SDCCAG3-209ENST00000468963 RIGQ13278 110 aa9.25□□□□□ -0.93
SDCCAG3-209ENST00000468963 NRACQ8N912 160 aa9.25□□□□□ -0.93
SDCCAG3-209ENST00000468963 LRP2P98164 4655 aa9.25□□□□□ -0.93
SDCCAG3-209ENST00000468963 PRR3P79522 188 aaKnown RBP9.24□□□□□ -0.93
SDCCAG3-209ENST00000468963 ISOC2Q96AB3 205 aa9.24□□□□□ -0.93
SDCCAG3-209ENST00000468963 LINC00474Q9P2X8 69 aa9.24□□□□□ -0.93
SDCCAG3-209ENST00000468963 CSDC2Q9Y534 153 aaKnown RBP9.24□□□□□ -0.93
SDCCAG3-209ENST00000468963 PPP1R17O96001 155 aa9.23□□□□□ -0.93
SDCCAG3-209ENST00000468963 SUMO2P61956 95 aaKnown RBP9.23□□□□□ -0.93
SDCCAG3-209ENST00000468963 SYCNQ0VAF6 134 aa9.23□□□□□ -0.93
SDCCAG3-209ENST00000468963 TMEM241Q24JQ0 296 aa9.23□□□□□ -0.93
SDCCAG3-209ENST00000468963 CARD19Q96LW7 228 aa9.23□□□□□ -0.93
SDCCAG3-209ENST00000468963 C1orf196B1AJZ1 125 aa9.22□□□□□ -0.93
SDCCAG3-209ENST00000468963 C9JQL5 133 aa9.22□□□□□ -0.93
SDCCAG3-209ENST00000468963 ZNF561-AS1K7EIQ3 104 aa9.22□□□□□ -0.93
SDCCAG3-209ENST00000468963 RPL23P62829 140 aaKnown RBP9.22□□□□□ -0.93
SDCCAG3-209ENST00000468963 FAM74A3Q4VXF1 159 aa9.22□□□□□ -0.93
SDCCAG3-209ENST00000468963 FAM104BQ5XKR9 115 aa9.22□□□□□ -0.93
SDCCAG3-209ENST00000468963 LINC01600Q96MT4 127 aa9.22□□□□□ -0.93
SDCCAG3-209ENST00000468963 PKIGQ9Y2B9 76 aa9.22□□□□□ -0.93
SDCCAG3-209ENST00000468963 UBE2D4Q9Y2X8 147 aa9.22□□□□□ -0.93
SDCCAG3-209ENST00000468963 FCER1GP30273 86 aa9.21□□□□□ -0.94
SDCCAG3-209ENST00000468963 MRPL51Q4U2R6 128 aaKnown RBP9.21□□□□□ -0.94
SDCCAG3-209ENST00000468963 NAT8BQ9UHF3 227 aa9.21□□□□□ -0.94
SDCCAG3-209ENST00000468963 IGLV4-69A0A075B6H9 119 aa9.2□□□□□ -0.94
SDCCAG3-209ENST00000468963 SMIM27A0A1W2PRY6 76 aa9.2□□□□□ -0.94
SDCCAG3-209ENST00000468963 CAMPP49913 170 aa9.2□□□□□ -0.94
SDCCAG3-209ENST00000468963 SRSF9Q13242 221 aaKnown RBP eCLIP9.2□□□□□ -0.94
SDCCAG3-209ENST00000468963 TRBV24-1A0A075B6N3 115 aa9.19□□□□□ -0.94
SDCCAG3-209ENST00000468963 LINC00862A6NCI5 91 aa9.19□□□□□ -0.94
SDCCAG3-209ENST00000468963 COX7A2LO14548 114 aa9.19□□□□□ -0.94
SDCCAG3-209ENST00000468963 PPP1R2P9O14990 202 aa9.19□□□□□ -0.94
SDCCAG3-209ENST00000468963 PTTG1IPP53801 180 aa9.19□□□□□ -0.94
SDCCAG3-209ENST00000468963 SMAGPQ0VAQ4 97 aa9.19□□□□□ -0.94
SDCCAG3-209ENST00000468963 RNASE13Q5GAN3 156 aaKnown RBP9.19□□□□□ -0.94
SDCCAG3-209ENST00000468963 KIR2DL4Q99706 377 aa9.19□□□□□ -0.94
SDCCAG3-209ENST00000468963 TIMM21Q9BVV7 248 aa9.19□□□□□ -0.94
SDCCAG3-209ENST00000468963 KRTAP10-8P60410 259 aa9.18□□□□□ -0.94
SDCCAG3-209ENST00000468963 RPL32P62910 135 aaKnown RBP9.18□□□□□ -0.94
SDCCAG3-209ENST00000468963 SPINK6Q6UWN8 80 aa9.18□□□□□ -0.94
SDCCAG3-209ENST00000468963 FAM104AQ969W3 186 aa9.18□□□□□ -0.94
SDCCAG3-209ENST00000468963 C20orf78Q9BR46 151 aa9.18□□□□□ -0.94
SDCCAG3-209ENST00000468963 NAT8Q9UHE5 227 aa9.18□□□□□ -0.94
SDCCAG3-209ENST00000468963 TRAV13-1A0A0B4J241 112 aa9.17□□□□□ -0.94
SDCCAG3-209ENST00000468963 LOC107984640A0A0U1RRK4 108 aa9.17□□□□□ -0.94
SDCCAG3-209ENST00000468963 MALP21145 153 aa9.17□□□□□ -0.94
SDCCAG3-209ENST00000468963 SRSF3P84103 164 aaKnown RBP9.17□□□□□ -0.94
SDCCAG3-209ENST00000468963 ADIRFQ15847 76 aa9.17□□□□□ -0.94
SDCCAG3-209ENST00000468963 C5orf38Q86SI9 138 aa9.17□□□□□ -0.94
SDCCAG3-209ENST00000468963 C2orf48Q96LS8 159 aa9.17□□□□□ -0.94
SDCCAG3-209ENST00000468963 A0A0J9YXV3 536 aa9.16□□□□□ -0.94
SDCCAG3-209ENST00000468963 A0A1B0GVG6 124 aa9.16□□□□□ -0.94
SDCCAG3-209ENST00000468963 A0A1B0GW15 77 aa9.16□□□□□ -0.94
SDCCAG3-209ENST00000468963 A0A1W2PNN7 141 aa9.16□□□□□ -0.94
SDCCAG3-209ENST00000468963 CKS2P33552 79 aa9.16□□□□□ -0.94
SDCCAG3-209ENST00000468963 GAGE2BQ13066 116 aa9.16□□□□□ -0.94
SDCCAG3-209ENST00000468963 Q6ZRP5 223 aa9.16□□□□□ -0.94
SDCCAG3-209ENST00000468963 Q6ZUT4 128 aa9.16□□□□□ -0.94
SDCCAG3-209ENST00000468963 TNFRSF6BO95407 300 aa9.15□□□□□ -0.94
SDCCAG3-209ENST00000468963 TMEM18Q96B42 140 aa9.15□□□□□ -0.94
SDCCAG3-209ENST00000468963 CAMK2N2Q96S95 79 aa9.15□□□□□ -0.94
SDCCAG3-209ENST00000468963 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.14□□□□□ -0.95
SDCCAG3-209ENST00000468963 TCAPO15273 167 aa9.14□□□□□ -0.95
SDCCAG3-209ENST00000468963 APOMO95445 188 aa9.14□□□□□ -0.95
SDCCAG3-209ENST00000468963 RPL39P62891 51 aaKnown RBP9.14□□□□□ -0.95
SDCCAG3-209ENST00000468963 PEA15Q15121 130 aa9.14□□□□□ -0.95
SDCCAG3-209ENST00000468963 SMDT1Q9H4I9 107 aa9.14□□□□□ -0.95
SDCCAG3-209ENST00000468963 RNF213Q63HN8 5207 aa9.14□□□□□ -0.95
SDCCAG3-209ENST00000468963 A0A1B0GXF2 115 aa9.13□□□□□ -0.95
SDCCAG3-209ENST00000468963 ODF1Q14990 250 aa9.13□□□□□ -0.95
SDCCAG3-209ENST00000468963 RNF151Q2KHN1 245 aa9.13□□□□□ -0.95
SDCCAG3-209ENST00000468963 IGHV3OR16-9A0A0B4J2B5 98 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms