RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 BVES-AS1Q5T3Y7 98 aa10.05□□□□□ -0.8
COL27A1-203ENST00000468565 RPL39LQ96EH5 51 aaKnown RBP10.05□□□□□ -0.8
COL27A1-203ENST00000468565 C9orf85Q96MD7 179 aa10.05□□□□□ -0.8
COL27A1-203ENST00000468565 KIF25-AS1Q9Y6Z4 181 aa10.05□□□□□ -0.8
COL27A1-203ENST00000468565 IGHV3-16A0A0C4DH30 117 aa10.05□□□□□ -0.8
COL27A1-203ENST00000468565 A0A0J9YY99 117 aa10.05□□□□□ -0.8
COL27A1-203ENST00000468565 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.05□□□□□ -0.8
COL27A1-203ENST00000468565 FGF6P10767 208 aa10.05□□□□□ -0.8
COL27A1-203ENST00000468565 BOD1L2Q8IYS8 172 aa10.05□□□□□ -0.8
COL27A1-203ENST00000468565 LINC00588Q9Y4M8 146 aa10.05□□□□□ -0.8
COL27A1-203ENST00000468565 C2orf91Q6ZV80 131 aa10.04□□□□□ -0.8
COL27A1-203ENST00000468565 ZNRF2Q8NHG8 242 aa10.04□□□□□ -0.8
COL27A1-203ENST00000468565 SPXQ9BT56 116 aa10.04□□□□□ -0.8
COL27A1-203ENST00000468565 MRPL16Q9NX20 251 aaKnown RBP10.04□□□□□ -0.8
COL27A1-203ENST00000468565 SIVA1O15304 175 aa10.03□□□□□ -0.8
COL27A1-203ENST00000468565 RPL32P62910 135 aaKnown RBP10.03□□□□□ -0.8
COL27A1-203ENST00000468565 AMMECR1LQ6DCA0 310 aa10.03□□□□□ -0.8
COL27A1-203ENST00000468565 OR5A1Q8NGJ0 315 aa10.03□□□□□ -0.8
COL27A1-203ENST00000468565 TOMM6Q96B49 74 aa10.03□□□□□ -0.8
COL27A1-203ENST00000468565 MDFICQ9P1T7 246 aa10.03□□□□□ -0.8
COL27A1-203ENST00000468565 A0A087WX48 190 aa10.03□□□□□ -0.8
COL27A1-203ENST00000468565 GAGE10A6NGK3 116 aa10.03□□□□□ -0.8
COL27A1-203ENST00000468565 FAM229AH3BQW9 127 aa10.03□□□□□ -0.8
COL27A1-203ENST00000468565 RTL8CO15255 209 aa10.03□□□□□ -0.8
COL27A1-203ENST00000468565 NMUP48645 174 aa10.03□□□□□ -0.8
COL27A1-203ENST00000468565 LINC00315P59091 139 aa10.03□□□□□ -0.8
COL27A1-203ENST00000468565 VSIG2Q96IQ7 327 aa10.03□□□□□ -0.8
COL27A1-203ENST00000468565 SCGB3A1Q96QR1 104 aa10.03□□□□□ -0.8
COL27A1-203ENST00000468565 TRAV12-1A0A0B4J245 112 aa10.01□□□□□ -0.81
COL27A1-203ENST00000468565 LINC01549A6NIU2 74 aa10.01□□□□□ -0.81
COL27A1-203ENST00000468565 F5H697 171 aa10.01□□□□□ -0.81
COL27A1-203ENST00000468565 PLNP26678 52 aa10.01□□□□□ -0.81
COL27A1-203ENST00000468565 SUMO4Q6EEV6 95 aa10.01□□□□□ -0.81
COL27A1-203ENST00000468565 HHLA3Q9XRX5 114 aa10.01□□□□□ -0.81
COL27A1-203ENST00000468565 TMEM97Q5BJF2 176 aa10.01□□□□□ -0.81
COL27A1-203ENST00000468565 UPK3BQ9BT76 320 aa10.01□□□□□ -0.81
COL27A1-203ENST00000468565 MRPL35Q9NZE8 188 aaKnown RBP10.01□□□□□ -0.81
COL27A1-203ENST00000468565 A0A087WWL8 130 aa10□□□□□ -0.81
COL27A1-203ENST00000468565 A0A096LPF7 62 aa10□□□□□ -0.81
COL27A1-203ENST00000468565 NBDYA0A0U1RRE5 68 aa10□□□□□ -0.81
COL27A1-203ENST00000468565 H7C1H1 209 aa10□□□□□ -0.81
COL27A1-203ENST00000468565 LCE2AQ5TA79 106 aaPredicted RBP10□□□□□ -0.81
COL27A1-203ENST00000468565 UFSP1Q6NVU6 142 aa10□□□□□ -0.81
COL27A1-203ENST00000468565 C2orf66Q6UXQ4 117 aa10□□□□□ -0.81
COL27A1-203ENST00000468565 Q6ZVH6 145 aa10□□□□□ -0.81
COL27A1-203ENST00000468565 NEGR1Q7Z3B1 354 aa10□□□□□ -0.81
COL27A1-203ENST00000468565 JPT2Q9H910 190 aa10□□□□□ -0.81
COL27A1-203ENST00000468565 PRO0255Q9UI72 69 aa10□□□□□ -0.81
COL27A1-203ENST00000468565 A0A1B0GVY2 172 aa9.99□□□□□ -0.81
COL27A1-203ENST00000468565 PRSS29PA6NIE9 313 aa9.99□□□□□ -0.81
COL27A1-203ENST00000468565 J3QR89 54 aa9.99□□□□□ -0.81
COL27A1-203ENST00000468565 VCYO14598 125 aa9.99□□□□□ -0.81
COL27A1-203ENST00000468565 EIF4EBP3O60516 100 aaPredicted RBP9.99□□□□□ -0.81
COL27A1-203ENST00000468565 IGHV3-53P01767 116 aa9.99□□□□□ -0.81
COL27A1-203ENST00000468565 HSD52Q0P140 79 aa9.99□□□□□ -0.81
COL27A1-203ENST00000468565 FHL2Q14192 279 aa9.99□□□□□ -0.81
COL27A1-203ENST00000468565 ESRGQ1W209 222 aa9.99□□□□□ -0.81
COL27A1-203ENST00000468565 C1orf134Q5TEV5 83 aa9.99□□□□□ -0.81
COL27A1-203ENST00000468565 SIGMAR1Q99720 223 aa9.99□□□□□ -0.81
COL27A1-203ENST00000468565 M0R2P5 195 aa9.99□□□□□ -0.81
COL27A1-203ENST00000468565 PAX4O43316 350 aa9.99□□□□□ -0.81
COL27A1-203ENST00000468565 CRYBA4P53673 196 aa9.99□□□□□ -0.81
COL27A1-203ENST00000468565 ZC2HC1BQ5TFG8 222 aa9.99□□□□□ -0.81
COL27A1-203ENST00000468565 PCP2Q8IVA1 136 aa9.99□□□□□ -0.81
COL27A1-203ENST00000468565 TRBV6-5A0A0K0K1A5 114 aa9.98□□□□□ -0.81
COL27A1-203ENST00000468565 A6NDN8 102 aa9.98□□□□□ -0.81
COL27A1-203ENST00000468565 F8VRH5 84 aa9.98□□□□□ -0.81
COL27A1-203ENST00000468565 ZNF56Q15929 161 aa9.98□□□□□ -0.81
COL27A1-203ENST00000468565 FAM74A4Q5TZK3 123 aa9.98□□□□□ -0.81
COL27A1-203ENST00000468565 KIR2DL4Q99706 377 aa9.98□□□□□ -0.81
COL27A1-203ENST00000468565 Q9H8V8 135 aa9.98□□□□□ -0.81
COL27A1-203ENST00000468565 CYSLTR1Q9Y271 337 aa9.98□□□□□ -0.81
COL27A1-203ENST00000468565 ICOSQ9Y6W8 199 aa9.98□□□□□ -0.81
COL27A1-203ENST00000468565 TRAV4A0A0B4J268 109 aa9.97□□□□□ -0.81
COL27A1-203ENST00000468565 POLR2KP53803 58 aaKnown RBP9.97□□□□□ -0.81
COL27A1-203ENST00000468565 ERASQ7Z444 233 aa9.97□□□□□ -0.81
COL27A1-203ENST00000468565 H3BRM9 83 aa9.97□□□□□ -0.81
COL27A1-203ENST00000468565 K7EP34 96 aa9.97□□□□□ -0.81
COL27A1-203ENST00000468565 NEXN-AS1Q8NBZ9 246 aa9.97□□□□□ -0.81
COL27A1-203ENST00000468565 ZNF479Q96JC4 524 aa9.97□□□□□ -0.81
COL27A1-203ENST00000468565 IGKV2D-26A0A0A0MRZ7 120 aa9.96□□□□□ -0.81
COL27A1-203ENST00000468565 TRGV4A0A0C4DH28 118 aa9.96□□□□□ -0.81
COL27A1-203ENST00000468565 CRYGDP07320 174 aa9.96□□□□□ -0.81
COL27A1-203ENST00000468565 ZNF876PQ49A33 203 aa9.96□□□□□ -0.81
COL27A1-203ENST00000468565 HIGD1BQ9P298 99 aa9.96□□□□□ -0.81
COL27A1-203ENST00000468565 SDHAF1A6NFY7 115 aa9.95□□□□□ -0.82
COL27A1-203ENST00000468565 C9orf118A6NHY6 69 aa9.95□□□□□ -0.82
COL27A1-203ENST00000468565 TTC32Q5I0X7 151 aa9.95□□□□□ -0.82
COL27A1-203ENST00000468565 ZFP2Q6ZN57 461 aa9.95□□□□□ -0.82
COL27A1-203ENST00000468565 BAALCQ8WXS3 180 aa9.95□□□□□ -0.82
COL27A1-203ENST00000468565 PKD1P98161 4303 aa9.95□□□□□ -0.82
COL27A1-203ENST00000468565 TRBV27A0A0K0K1C4 114 aa9.95□□□□□ -0.82
COL27A1-203ENST00000468565 MRPL23Q16540 153 aaKnown RBP9.95□□□□□ -0.82
COL27A1-203ENST00000468565 C6orf223Q8N319 242 aa9.95□□□□□ -0.82
COL27A1-203ENST00000468565 PKHD1P08F94 4074 aa9.95□□□□□ -0.82
COL27A1-203ENST00000468565 M0QY20 66 aa9.94□□□□□ -0.82
COL27A1-203ENST00000468565 TMEM141Q96I45 108 aa9.94□□□□□ -0.82
COL27A1-203ENST00000468565 TRAV8-6A0A0B4J262 113 aa9.94□□□□□ -0.82
COL27A1-203ENST00000468565 PTH2Q96A98 100 aa9.94□□□□□ -0.82
COL27A1-203ENST00000468565 RHOHQ15669 191 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms