RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 CHCHD10Q8WYQ3 142 aaPredicted RBP11.02□□□□□ -0.65
SSBP1-207ENST00000468267 TMEM101Q96IK0 257 aa11.02□□□□□ -0.65
SSBP1-207ENST00000468267 A0A1B0GW15 77 aa11.01□□□□□ -0.65
SSBP1-207ENST00000468267 CAMPP49913 170 aa11.01□□□□□ -0.65
SSBP1-207ENST00000468267 MRPL51Q4U2R6 128 aaKnown RBP11.01□□□□□ -0.65
SSBP1-207ENST00000468267 SDIM1Q6ZPB5 146 aa11.01□□□□□ -0.65
SSBP1-207ENST00000468267 OR5A1Q8NGJ0 315 aa11.01□□□□□ -0.65
SSBP1-207ENST00000468267 BTF3L4Q96K17 158 aa11.01□□□□□ -0.65
SSBP1-207ENST00000468267 AP5S1Q9NUS5 200 aa11.01□□□□□ -0.65
SSBP1-207ENST00000468267 SLPIP03973 132 aa11□□□□□ -0.65
SSBP1-207ENST00000468267 CFAP161Q6P656 301 aa11□□□□□ -0.65
SSBP1-207ENST00000468267 MRPL52Q86TS9 123 aaKnown RBP11□□□□□ -0.65
SSBP1-207ENST00000468267 C15orf56Q8N910 161 aa11□□□□□ -0.65
SSBP1-207ENST00000468267 SUMO2P61956 95 aaKnown RBP10.99□□□□□ -0.65
SSBP1-207ENST00000468267 C7orf77A4D0Y5 90 aa10.98□□□□□ -0.65
SSBP1-207ENST00000468267 LINC00862A6NCI5 91 aa10.98□□□□□ -0.65
SSBP1-207ENST00000468267 PPP1R2P9O14990 202 aa10.98□□□□□ -0.65
SSBP1-207ENST00000468267 FCER1GP30273 86 aa10.98□□□□□ -0.65
SSBP1-207ENST00000468267 CDC42SE2Q9NRR3 84 aa10.98□□□□□ -0.65
SSBP1-207ENST00000468267 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.97□□□□□ -0.65
SSBP1-207ENST00000468267 LINC00959A0A1B0GUT2 108 aa10.97□□□□□ -0.65
SSBP1-207ENST00000468267 S100A8P05109 93 aa10.97□□□□□ -0.65
SSBP1-207ENST00000468267 MRPL54Q6P161 138 aaKnown RBP10.97□□□□□ -0.65
SSBP1-207ENST00000468267 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.97□□□□□ -0.65
SSBP1-207ENST00000468267 PKHD1L1Q86WI1 4243 aa10.97□□□□□ -0.65
SSBP1-207ENST00000468267 TRBV24-1A0A075B6N3 115 aa10.96□□□□□ -0.65
SSBP1-207ENST00000468267 IGHV3-64A0A075B6Q5 118 aa10.96□□□□□ -0.65
SSBP1-207ENST00000468267 A0A1B0GXF2 115 aa10.96□□□□□ -0.65
SSBP1-207ENST00000468267 PANO1I0J062 215 aa10.96□□□□□ -0.65
SSBP1-207ENST00000468267 CKS2P33552 79 aa10.96□□□□□ -0.65
SSBP1-207ENST00000468267 RAB14P61106 215 aa10.96□□□□□ -0.65
SSBP1-207ENST00000468267 HBBP68871 147 aa10.96□□□□□ -0.65
SSBP1-207ENST00000468267 FOXI1Q12951 378 aa10.96□□□□□ -0.65
SSBP1-207ENST00000468267 ZNF664Q8N3J9 261 aa10.96□□□□□ -0.65
SSBP1-207ENST00000468267 KIR2DL4Q99706 377 aa10.96□□□□□ -0.65
SSBP1-207ENST00000468267 C20orf78Q9BR46 151 aa10.96□□□□□ -0.65
SSBP1-207ENST00000468267 F8W036 122 aa10.95□□□□□ -0.66
SSBP1-207ENST00000468267 XCL1P47992 114 aa10.95□□□□□ -0.66
SSBP1-207ENST00000468267 KRTAP10-4P60372 401 aaPredicted RBP10.95□□□□□ -0.66
SSBP1-207ENST00000468267 RPL32P62910 135 aaKnown RBP10.95□□□□□ -0.66
SSBP1-207ENST00000468267 CCL25O15444 150 aa10.94□□□□□ -0.66
SSBP1-207ENST00000468267 SMAGPQ0VAQ4 97 aa10.94□□□□□ -0.66
SSBP1-207ENST00000468267 SS18Q15532 418 aa10.94□□□□□ -0.66
SSBP1-207ENST00000468267 HIGD2BQ4VC39 106 aa10.94□□□□□ -0.66
SSBP1-207ENST00000468267 CSDC2Q9Y534 153 aaKnown RBP10.94□□□□□ -0.66
SSBP1-207ENST00000468267 GVQW2A0A096LPI5 108 aaPredicted RBP10.93□□□□□ -0.66
SSBP1-207ENST00000468267 TNFRSF6BO95407 300 aa10.93□□□□□ -0.66
SSBP1-207ENST00000468267 CIRBPQ14011 172 aaKnown RBP10.93□□□□□ -0.66
SSBP1-207ENST00000468267 D6R8Y8 96 aa10.92□□□□□ -0.66
SSBP1-207ENST00000468267 PNRC1Q12796 327 aaPredicted RBP10.92□□□□□ -0.66
SSBP1-207ENST00000468267 ATP5L2Q7Z4Y8 100 aa10.92□□□□□ -0.66
SSBP1-207ENST00000468267 UBE2D4Q9Y2X8 147 aa10.92□□□□□ -0.66
SSBP1-207ENST00000468267 TCAPO15273 167 aa10.91□□□□□ -0.66
SSBP1-207ENST00000468267 PPBPP02775 128 aa10.91□□□□□ -0.66
SSBP1-207ENST00000468267 CD164L2Q6UWJ8 174 aa10.91□□□□□ -0.66
SSBP1-207ENST00000468267 TIMM21Q9BVV7 248 aa10.91□□□□□ -0.66
SSBP1-207ENST00000468267 LRP1Q07954 4544 aaKnown RBP10.91□□□□□ -0.66
SSBP1-207ENST00000468267 PHOX2AO14813 284 aa10.9□□□□□ -0.66
SSBP1-207ENST00000468267 TMEM18Q96B42 140 aa10.9□□□□□ -0.66
SSBP1-207ENST00000468267 SMIM2Q9BVW6 85 aa10.9□□□□□ -0.66
SSBP1-207ENST00000468267 IGHV1-58A0A0C4DH39 117 aa10.89□□□□□ -0.67
SSBP1-207ENST00000468267 C1orf196B1AJZ1 125 aa10.89□□□□□ -0.67
SSBP1-207ENST00000468267 NPYP01303 97 aa10.89□□□□□ -0.67
SSBP1-207ENST00000468267 MT-ND4LP03901 98 aa10.89□□□□□ -0.67
SSBP1-207ENST00000468267 CLLU1Q5K131 121 aa10.89□□□□□ -0.67
SSBP1-207ENST00000468267 ANAPC16Q96DE5 110 aa10.89□□□□□ -0.67
SSBP1-207ENST00000468267 DPH3Q96FX2 82 aa10.89□□□□□ -0.67
SSBP1-207ENST00000468267 FAT3Q8TDW7 4589 aa10.88□□□□□ -0.67
SSBP1-207ENST00000468267 CHTF8P0CG12 524 aa10.88□□□□□ -0.67
SSBP1-207ENST00000468267 RPL37AP61513 92 aaKnown RBP10.88□□□□□ -0.67
SSBP1-207ENST00000468267 COX6A2Q02221 97 aa10.88□□□□□ -0.67
SSBP1-207ENST00000468267 RNASE13Q5GAN3 156 aaKnown RBP10.88□□□□□ -0.67
SSBP1-207ENST00000468267 SPACA4Q8TDM5 124 aa10.88□□□□□ -0.67
SSBP1-207ENST00000468267 RPL39P62891 51 aaKnown RBP10.87□□□□□ -0.67
SSBP1-207ENST00000468267 TMEM136Q6ZRR5 245 aa10.87□□□□□ -0.67
SSBP1-207ENST00000468267 ORMDL3Q8N138 153 aa10.87□□□□□ -0.67
SSBP1-207ENST00000468267 A0A087WYN8 130 aa10.86□□□□□ -0.67
SSBP1-207ENST00000468267 Q6ZUT4 128 aa10.86□□□□□ -0.67
SSBP1-207ENST00000468267 PRSS3P2Q8NHM4 247 aa10.86□□□□□ -0.67
SSBP1-207ENST00000468267 LINC00526Q96FQ7 95 aa10.86□□□□□ -0.67
SSBP1-207ENST00000468267 PRELID3AQ96N28 172 aa10.86□□□□□ -0.67
SSBP1-207ENST00000468267 TRAV13-1A0A0B4J241 112 aa10.85□□□□□ -0.67
SSBP1-207ENST00000468267 KRTAP29-1A8MX34 341 aaPredicted RBP10.85□□□□□ -0.67
SSBP1-207ENST00000468267 FAM104AQ969W3 186 aa10.85□□□□□ -0.67
SSBP1-207ENST00000468267 COX7A2LO14548 114 aa10.84□□□□□ -0.67
SSBP1-207ENST00000468267 SPANXA1Q9NS26 97 aa10.84□□□□□ -0.67
SSBP1-207ENST00000468267 PLAC8Q9NZF1 115 aa10.84□□□□□ -0.67
SSBP1-207ENST00000468267 ZNF561-AS1K7EIQ3 104 aa10.83□□□□□ -0.68
SSBP1-207ENST00000468267 MALP21145 153 aa10.83□□□□□ -0.68
SSBP1-207ENST00000468267 IFITM2Q01629 132 aa10.83□□□□□ -0.68
SSBP1-207ENST00000468267 PRSS47A8MTI9 375 aa10.82□□□□□ -0.68
SSBP1-207ENST00000468267 RAB5AP20339 215 aa10.82□□□□□ -0.68
SSBP1-207ENST00000468267 MRPS36P82909 103 aaKnown RBP10.82□□□□□ -0.68
SSBP1-207ENST00000468267 MAJINQ3KP22 176 aa10.82□□□□□ -0.68
SSBP1-207ENST00000468267 CARD19Q96LW7 228 aa10.82□□□□□ -0.68
SSBP1-207ENST00000468267 LAMTOR2Q9Y2Q5 125 aa10.82□□□□□ -0.68
SSBP1-207ENST00000468267 IGKV2-24A0A0C4DH68 120 aa10.81□□□□□ -0.68
SSBP1-207ENST00000468267 SYCNQ0VAF6 134 aa10.81□□□□□ -0.68
SSBP1-207ENST00000468267 UQCC3Q6UW78 93 aa10.81□□□□□ -0.68
SSBP1-207ENST00000468267 OPRPNQ99935 248 aaPredicted RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 172.8 ms