RNA–Protein interactions for RNA: ENST00000467465.1

HLA-DOA-203, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-203ENST00000467465 SMKR1H3BMG3 65 aa6.28□□□□□ -1.4
HLA-DOA-203ENST00000467465 PPBPP02775 128 aa6.28□□□□□ -1.4
HLA-DOA-203ENST00000467465 MT-ND4LP03901 98 aa6.28□□□□□ -1.4
HLA-DOA-203ENST00000467465 CKS2P33552 79 aa6.28□□□□□ -1.4
HLA-DOA-203ENST00000467465 CNBPP62633 177 aaKnown RBP6.28□□□□□ -1.4
HLA-DOA-203ENST00000467465 RPL32P62910 135 aaKnown RBP6.28□□□□□ -1.4
HLA-DOA-203ENST00000467465 LINC01620Q4KN68 170 aa6.28□□□□□ -1.4
HLA-DOA-203ENST00000467465 MRPL54Q6P161 138 aaKnown RBP6.28□□□□□ -1.4
HLA-DOA-203ENST00000467465 C9orf163Q8N9P6 203 aa6.28□□□□□ -1.4
HLA-DOA-203ENST00000467465 TMEM18Q96B42 140 aa6.28□□□□□ -1.4
HLA-DOA-203ENST00000467465 ANAPC16Q96DE5 110 aa6.28□□□□□ -1.4
HLA-DOA-203ENST00000467465 CHAC1Q9BUX1 264 aa6.28□□□□□ -1.4
HLA-DOA-203ENST00000467465 TRBV24-1A0A075B6N3 115 aa6.27□□□□□ -1.41
HLA-DOA-203ENST00000467465 A0A1B0GXF2 115 aa6.27□□□□□ -1.41
HLA-DOA-203ENST00000467465 GAGE12HA6NDE8 117 aa6.27□□□□□ -1.41
HLA-DOA-203ENST00000467465 PHOX2AO14813 284 aa6.27□□□□□ -1.41
HLA-DOA-203ENST00000467465 PLA2G1BP04054 148 aaKnown RBP6.27□□□□□ -1.41
HLA-DOA-203ENST00000467465 SCXQ7RTU7 201 aa6.27□□□□□ -1.41
HLA-DOA-203ENST00000467465 CHCHD10Q8WYQ3 142 aaPredicted RBP6.27□□□□□ -1.41
HLA-DOA-203ENST00000467465 CSDC2Q9Y534 153 aaKnown RBP6.27□□□□□ -1.41
HLA-DOA-203ENST00000467465 SS18Q15532 418 aa6.26□□□□□ -1.41
HLA-DOA-203ENST00000467465 UQCC3Q6UW78 93 aa6.26□□□□□ -1.41
HLA-DOA-203ENST00000467465 ZNF664Q8N3J9 261 aa6.26□□□□□ -1.41
HLA-DOA-203ENST00000467465 CDC42SE2Q9NRR3 84 aa6.26□□□□□ -1.41
HLA-DOA-203ENST00000467465 LINC00959A0A1B0GUT2 108 aa6.25□□□□□ -1.41
HLA-DOA-203ENST00000467465 D6R8Y8 96 aa6.25□□□□□ -1.41
HLA-DOA-203ENST00000467465 J3QL48 77 aa6.25□□□□□ -1.41
HLA-DOA-203ENST00000467465 CCL25O15444 150 aa6.25□□□□□ -1.41
HLA-DOA-203ENST00000467465 TNFRSF6BO95407 300 aa6.25□□□□□ -1.41
HLA-DOA-203ENST00000467465 ORMDL3Q8N138 153 aa6.25□□□□□ -1.41
HLA-DOA-203ENST00000467465 LINC00528Q8N1L1 170 aa6.25□□□□□ -1.41
HLA-DOA-203ENST00000467465 TIMM21Q9BVV7 248 aa6.25□□□□□ -1.41
HLA-DOA-203ENST00000467465 SMIM2Q9BVW6 85 aa6.25□□□□□ -1.41
HLA-DOA-203ENST00000467465 IGHV3-64A0A075B6Q5 118 aa6.24□□□□□ -1.41
HLA-DOA-203ENST00000467465 FOXI1Q12951 378 aa6.24□□□□□ -1.41
HLA-DOA-203ENST00000467465 C15orf56Q8N910 161 aa6.24□□□□□ -1.41
HLA-DOA-203ENST00000467465 CIRBP-AS1Q8TBR5 109 aa6.24□□□□□ -1.41
HLA-DOA-203ENST00000467465 LAMTOR2Q9Y2Q5 125 aa6.24□□□□□ -1.41
HLA-DOA-203ENST00000467465 UBE2D4Q9Y2X8 147 aa6.24□□□□□ -1.41
HLA-DOA-203ENST00000467465 GVQW2A0A096LPI5 108 aaPredicted RBP6.23□□□□□ -1.41
HLA-DOA-203ENST00000467465 IGHV1-58A0A0C4DH39 117 aa6.23□□□□□ -1.41
HLA-DOA-203ENST00000467465 C1orf196B1AJZ1 125 aa6.23□□□□□ -1.41
HLA-DOA-203ENST00000467465 XCL1P47992 114 aa6.23□□□□□ -1.41
HLA-DOA-203ENST00000467465 NDUFA5Q16718 116 aa6.23□□□□□ -1.41
HLA-DOA-203ENST00000467465 CD164L2Q6UWJ8 174 aa6.23□□□□□ -1.41
HLA-DOA-203ENST00000467465 SDIM1Q6ZPB5 146 aa6.23□□□□□ -1.41
HLA-DOA-203ENST00000467465 TMEM136Q6ZRR5 245 aa6.23□□□□□ -1.41
HLA-DOA-203ENST00000467465 PKIGQ9Y2B9 76 aa6.23□□□□□ -1.41
HLA-DOA-203ENST00000467465 NPYP01303 97 aa6.22□□□□□ -1.41
HLA-DOA-203ENST00000467465 RAB5AP20339 215 aa6.22□□□□□ -1.41
HLA-DOA-203ENST00000467465 PRELID3AQ96N28 172 aa6.22□□□□□ -1.41
HLA-DOA-203ENST00000467465 IMMP2LQ96T52 175 aa6.22□□□□□ -1.41
HLA-DOA-203ENST00000467465 SPANXA1Q9NS26 97 aa6.22□□□□□ -1.41
HLA-DOA-203ENST00000467465 UBR4Q5T4S7 5183 aa6.21□□□□□ -1.41
HLA-DOA-203ENST00000467465 TMEM218A2RU14 115 aa6.21□□□□□ -1.42
HLA-DOA-203ENST00000467465 IFITM2Q01629 132 aa6.21□□□□□ -1.42
HLA-DOA-203ENST00000467465 CIRBPQ14011 172 aaKnown RBP6.21□□□□□ -1.42
HLA-DOA-203ENST00000467465 HIGD2BQ4VC39 106 aa6.21□□□□□ -1.42
HLA-DOA-203ENST00000467465 CTDSP1Q9GZU7 261 aa6.21□□□□□ -1.42
HLA-DOA-203ENST00000467465 DMBT1Q9UGM3 2413 aaPredicted RBP6.2□□□□□ -1.42
HLA-DOA-203ENST00000467465 TRAV9-1A0A075B6T8 112 aa6.2□□□□□ -1.42
HLA-DOA-203ENST00000467465 PRSS47A8MTI9 375 aa6.2□□□□□ -1.42
HLA-DOA-203ENST00000467465 SLPIP03973 132 aa6.2□□□□□ -1.42
HLA-DOA-203ENST00000467465 MALP21145 153 aa6.2□□□□□ -1.42
HLA-DOA-203ENST00000467465 MRPS36P82909 103 aaKnown RBP6.2□□□□□ -1.42
HLA-DOA-203ENST00000467465 Q6ZUT4 128 aa6.2□□□□□ -1.42
HLA-DOA-203ENST00000467465 SEC11CQ9BY50 192 aa6.2□□□□□ -1.42
HLA-DOA-203ENST00000467465 MAP1LC3AQ9H492 121 aa6.2□□□□□ -1.42
HLA-DOA-203ENST00000467465 DNAH8Q96JB1 4490 aa6.2□□□□□ -1.42
HLA-DOA-203ENST00000467465 FAT1Q14517 4588 aa6.2□□□□□ -1.42
HLA-DOA-203ENST00000467465 SRRM2Q9UQ35 2752 aaKnown RBP6.19□□□□□ -1.42
HLA-DOA-203ENST00000467465 TRAV13-1A0A0B4J241 112 aa6.19□□□□□ -1.42
HLA-DOA-203ENST00000467465 ZNF561-AS1K7EIQ3 104 aa6.19□□□□□ -1.42
HLA-DOA-203ENST00000467465 K7EMI3 77 aa6.19□□□□□ -1.42
HLA-DOA-203ENST00000467465 COX7A2LO14548 114 aa6.19□□□□□ -1.42
HLA-DOA-203ENST00000467465 ADCYAP1P18509 176 aa6.19□□□□□ -1.42
HLA-DOA-203ENST00000467465 RPL39P62891 51 aaKnown RBP6.19□□□□□ -1.42
HLA-DOA-203ENST00000467465 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.19□□□□□ -1.42
HLA-DOA-203ENST00000467465 VPS13BQ7Z7G8 4022 aa6.19□□□□□ -1.42
HLA-DOA-203ENST00000467465 MYCBP2O75592 4640 aa6.19□□□□□ -1.42
HLA-DOA-203ENST00000467465 FLG2Q5D862 2391 aaPredicted RBP6.18□□□□□ -1.42
HLA-DOA-203ENST00000467465 APOMO95445 188 aa6.18□□□□□ -1.42
HLA-DOA-203ENST00000467465 S100PP25815 95 aa6.18□□□□□ -1.42
HLA-DOA-203ENST00000467465 IFI27P40305 119 aaPredicted RBP6.18□□□□□ -1.42
HLA-DOA-203ENST00000467465 RNASE13Q5GAN3 156 aaKnown RBP6.18□□□□□ -1.42
HLA-DOA-203ENST00000467465 SERTAD4-AS1Q5TG53 156 aa6.18□□□□□ -1.42
HLA-DOA-203ENST00000467465 COMMD7Q86VX2 200 aa6.18□□□□□ -1.42
HLA-DOA-203ENST00000467465 SPACA4Q8TDM5 124 aa6.18□□□□□ -1.42
HLA-DOA-203ENST00000467465 DPH3Q96FX2 82 aa6.18□□□□□ -1.42
HLA-DOA-203ENST00000467465 CARD19Q96LW7 228 aa6.18□□□□□ -1.42
HLA-DOA-203ENST00000467465 LINC00474Q9P2X8 69 aa6.18□□□□□ -1.42
HLA-DOA-203ENST00000467465 PYGO1Q9Y3Y4 419 aa6.18□□□□□ -1.42
HLA-DOA-203ENST00000467465 RPL37AP61513 92 aaKnown RBP6.17□□□□□ -1.42
HLA-DOA-203ENST00000467465 COX6A2Q02221 97 aa6.17□□□□□ -1.42
HLA-DOA-203ENST00000467465 SYCNQ0VAF6 134 aa6.17□□□□□ -1.42
HLA-DOA-203ENST00000467465 ORMDL2Q53FV1 153 aa6.17□□□□□ -1.42
HLA-DOA-203ENST00000467465 Q8N8P6 123 aa6.17□□□□□ -1.42
HLA-DOA-203ENST00000467465 LOC389332A0A1B0GUA5 103 aa6.16□□□□□ -1.42
HLA-DOA-203ENST00000467465 IFITM10A6NMD0 228 aa6.16□□□□□ -1.42
HLA-DOA-203ENST00000467465 PANO1I0J062 215 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms