RNA–Protein interactions for RNA: ENST00000466982.1

SFXN3-204, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,756 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-204ENST00000466982 TLN1Q9Y490 2541 aaKnown RBP8.09□□□□□ -1.11
SFXN3-204ENST00000466982 A0A087WVE0 104 aa8.09□□□□□ -1.11
SFXN3-204ENST00000466982 MRPS36P82909 103 aaKnown RBP8.09□□□□□ -1.11
SFXN3-204ENST00000466982 C4orf48Q5BLP8 95 aa8.09□□□□□ -1.11
SFXN3-204ENST00000466982 Q6JHZ5 121 aa8.09□□□□□ -1.11
SFXN3-204ENST00000466982 ATRXP46100 2492 aa8.09□□□□□ -1.12
SFXN3-204ENST00000466982 IGHV3OR16-10A0A075B7F0 116 aa8.08□□□□□ -1.12
SFXN3-204ENST00000466982 TRBV6-5A0A0K0K1A5 114 aa8.08□□□□□ -1.12
SFXN3-204ENST00000466982 CCL21O00585 134 aa8.08□□□□□ -1.12
SFXN3-204ENST00000466982 PKD1L2Q7Z442 2459 aa8.08□□□□□ -1.12
SFXN3-204ENST00000466982 SPTAN1Q13813 2472 aaKnown RBP8.08□□□□□ -1.12
SFXN3-204ENST00000466982 DAZ2Q13117 558 aaKnown RBP8.08□□□□□ -1.12
SFXN3-204ENST00000466982 C1orf158Q8N1D5 194 aa8.08□□□□□ -1.12
SFXN3-204ENST00000466982 LINC01560Q8TB33 94 aa8.08□□□□□ -1.12
SFXN3-204ENST00000466982 DAZ3Q9NR90 486 aaKnown RBP8.08□□□□□ -1.12
SFXN3-204ENST00000466982 IGKV3D-7A0A0C4DH55 119 aa8.07□□□□□ -1.12
SFXN3-204ENST00000466982 IGHG2P01859 326 aa8.07□□□□□ -1.12
SFXN3-204ENST00000466982 SS18Q15532 418 aa8.07□□□□□ -1.12
SFXN3-204ENST00000466982 LINC00474Q9P2X8 69 aa8.07□□□□□ -1.12
SFXN3-204ENST00000466982 MAP1AP78559 2803 aaPredicted RBP8.07□□□□□ -1.12
SFXN3-204ENST00000466982 IGHV1-58A0A0C4DH39 117 aa8.07□□□□□ -1.12
SFXN3-204ENST00000466982 H7BZZ5 65 aa8.07□□□□□ -1.12
SFXN3-204ENST00000466982 CD28P10747 220 aa8.07□□□□□ -1.12
SFXN3-204ENST00000466982 XCL1P47992 114 aa8.07□□□□□ -1.12
SFXN3-204ENST00000466982 LYPD5Q6UWN5 251 aa8.07□□□□□ -1.12
SFXN3-204ENST00000466982 Q8N2B8 174 aa8.07□□□□□ -1.12
SFXN3-204ENST00000466982 XCL2Q9UBD3 114 aa8.07□□□□□ -1.12
SFXN3-204ENST00000466982 M0R1W7 72 aa8.06□□□□□ -1.12
SFXN3-204ENST00000466982 IGKV3-20P01619 116 aa8.06□□□□□ -1.12
SFXN3-204ENST00000466982 ITPR1Q14643 2758 aa8.06□□□□□ -1.12
SFXN3-204ENST00000466982 MINOS1Q5TGZ0 78 aa8.06□□□□□ -1.12
SFXN3-204ENST00000466982 C20orf197Q8N268 126 aa8.06□□□□□ -1.12
SFXN3-204ENST00000466982 Q8NA96 180 aa8.06□□□□□ -1.12
SFXN3-204ENST00000466982 COPS9Q8WXC6 57 aa8.06□□□□□ -1.12
SFXN3-204ENST00000466982 IGHV3-73A0A0B4J1V6 119 aa8.05□□□□□ -1.12
SFXN3-204ENST00000466982 INAFM2P0DMQ5 153 aa8.05□□□□□ -1.12
SFXN3-204ENST00000466982 ZFP36P26651 326 aaKnown RBP8.05□□□□□ -1.12
SFXN3-204ENST00000466982 ZNF625Q96I27 306 aaPredicted RBP8.05□□□□□ -1.12
SFXN3-204ENST00000466982 VSIG2Q96IQ7 327 aa8.05□□□□□ -1.12
SFXN3-204ENST00000466982 Q9UF83 564 aa8.05□□□□□ -1.12
SFXN3-204ENST00000466982 C22orf24Q9Y442 160 aa8.05□□□□□ -1.12
SFXN3-204ENST00000466982 RBMY1BA6NDE4 496 aaKnown RBP8.05□□□□□ -1.12
SFXN3-204ENST00000466982 RBMY1EA6NEQ0 496 aaKnown RBP8.05□□□□□ -1.12
SFXN3-204ENST00000466982 IGHV3-11P01762 117 aa8.05□□□□□ -1.12
SFXN3-204ENST00000466982 RBMY1DP0C7P1 496 aaKnown RBP8.05□□□□□ -1.12
SFXN3-204ENST00000466982 RBMY1A1P0DJD3 496 aaKnown RBP8.05□□□□□ -1.12
SFXN3-204ENST00000466982 RBMY1CP0DJD4 496 aa8.05□□□□□ -1.12
SFXN3-204ENST00000466982 RBMY1FQ15415 496 aaKnown RBP8.05□□□□□ -1.12
SFXN3-204ENST00000466982 VPS13CQ709C8 3753 aa8.05□□□□□ -1.12
SFXN3-204ENST00000466982 CUBNO60494 3623 aa8.05□□□□□ -1.12
SFXN3-204ENST00000466982 KLLNB2CW77 178 aa8.05□□□□□ -1.12
SFXN3-204ENST00000466982 PROK1P58294 105 aa8.05□□□□□ -1.12
SFXN3-204ENST00000466982 KLK9Q9UKQ9 250 aa8.05□□□□□ -1.12
SFXN3-204ENST00000466982 GRNP28799 593 aaKnown RBP8.04□□□□□ -1.12
SFXN3-204ENST00000466982 Q6ZRU5 148 aa8.04□□□□□ -1.12
SFXN3-204ENST00000466982 UBE2D4Q9Y2X8 147 aa8.04□□□□□ -1.12
SFXN3-204ENST00000466982 IGHV3-16A0A0C4DH30 117 aa8.03□□□□□ -1.12
SFXN3-204ENST00000466982 GHRHP01286 108 aa8.03□□□□□ -1.12
SFXN3-204ENST00000466982 BAALC-AS2P0C853 105 aa8.03□□□□□ -1.12
SFXN3-204ENST00000466982 PRR15Q8IV56 129 aa8.03□□□□□ -1.12
SFXN3-204ENST00000466982 FAM218AQ96MZ4 157 aa8.03□□□□□ -1.12
SFXN3-204ENST00000466982 CRYBG3Q68DQ2 2970 aa8.03□□□□□ -1.12
SFXN3-204ENST00000466982 CCKP06307 115 aa8.03□□□□□ -1.12
SFXN3-204ENST00000466982 KLK9Q2XQG4 91 aa8.03□□□□□ -1.12
SFXN3-204ENST00000466982 DOPEY2Q9Y3R5 2298 aa8.03□□□□□ -1.12
SFXN3-204ENST00000466982 COX7A2LO14548 114 aa8.02□□□□□ -1.13
SFXN3-204ENST00000466982 TIMM17BO60830 172 aa8.02□□□□□ -1.13
SFXN3-204ENST00000466982 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.02□□□□□ -1.133e-7■■□□□ 14.5
SFXN3-204ENST00000466982 TRBV7-6A0A0J9YX20 115 aa8.02□□□□□ -1.13
SFXN3-204ENST00000466982 Q9HAA7 133 aa8.02□□□□□ -1.13
SFXN3-204ENST00000466982 USP24Q9UPU5 2620 aa8.02□□□□□ -1.13
SFXN3-204ENST00000466982 SAA4P35542 130 aa8.01□□□□□ -1.13
SFXN3-204ENST00000466982 BEAN1Q3B7T3 259 aa8.01□□□□□ -1.13
SFXN3-204ENST00000466982 STHQ8IWL8 128 aa8.01□□□□□ -1.13
SFXN3-204ENST00000466982 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.01□□□□□ -1.13
SFXN3-204ENST00000466982 RHPN1-AS1Q9BWJ2 59 aa8.01□□□□□ -1.13
SFXN3-204ENST00000466982 MINOS1-NBL1R4GNA1 71 aa8.01□□□□□ -1.13
SFXN3-204ENST00000466982 CDKN2A-AS1Q9UH64 79 aa8.01□□□□□ -1.13
SFXN3-204ENST00000466982 CREBBPQ92793 2442 aa8.01□□□□□ -1.13
SFXN3-204ENST00000466982 HOXD3P31249 432 aaPredicted RBP8□□□□□ -1.13
SFXN3-204ENST00000466982 SNRPD3P62318 126 aaKnown RBP8□□□□□ -1.13
SFXN3-204ENST00000466982 C9orf129Q5T035 196 aaKnown RBP8□□□□□ -1.13
SFXN3-204ENST00000466982 SOSTDC1Q6X4U4 206 aa8□□□□□ -1.13
SFXN3-204ENST00000466982 EPG5Q9HCE0 2579 aa8□□□□□ -1.13
SFXN3-204ENST00000466982 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8□□□□□ -1.13
SFXN3-204ENST00000466982 IGKV2-29A2NJV5 120 aaPredicted RBP8□□□□□ -1.13
SFXN3-204ENST00000466982 LINC00308Q8TCZ7 52 aa8□□□□□ -1.13
SFXN3-204ENST00000466982 CSMD2Q7Z408 3487 aa8□□□□□ -1.13
SFXN3-204ENST00000466982 FAM222AQ5U5X8 452 aa7.99□□□□□ -1.13
SFXN3-204ENST00000466982 PRM2P04554 102 aa7.99□□□□□ -1.13
SFXN3-204ENST00000466982 HTN1P15515 57 aa7.99□□□□□ -1.13
SFXN3-204ENST00000466982 ADORA2A-AS1P86434 159 aa7.99□□□□□ -1.13
SFXN3-204ENST00000466982 CFHR3Q02985 330 aa7.99□□□□□ -1.13
SFXN3-204ENST00000466982 C5orf56Q8N8D9 126 aa7.99□□□□□ -1.13
SFXN3-204ENST00000466982 NDUFA4O00483 81 aa7.99□□□□□ -1.13
SFXN3-204ENST00000466982 RBM3P98179 157 aaKnown RBP7.98□□□□□ -1.13
SFXN3-204ENST00000466982 SPINK13Q1W4C9 94 aa7.98□□□□□ -1.13
SFXN3-204ENST00000466982 ZFYVE26Q68DK2 2539 aa7.98□□□□□ -1.13
SFXN3-204ENST00000466982 PAX4O43316 350 aa7.98□□□□□ -1.13
SFXN3-204ENST00000466982 Q9H8V8 135 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms