RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 H3BS24 57 aa3.41□□□□□ -1.86
CXXC4-202ENST00000466963 MALP21145 153 aa3.41□□□□□ -1.86
CXXC4-202ENST00000466963 CRIP1P50238 77 aa3.41□□□□□ -1.86
CXXC4-202ENST00000466963 SUMO4Q6EEV6 95 aa3.41□□□□□ -1.86
CXXC4-202ENST00000466963 OR2D3Q8NGH3 330 aa3.41□□□□□ -1.86
CXXC4-202ENST00000466963 MRAP2Q96G30 205 aa3.41□□□□□ -1.86
CXXC4-202ENST00000466963 PACRGQ96M98 296 aaPredicted RBP3.41□□□□□ -1.86
CXXC4-202ENST00000466963 CAMK2N2Q96S95 79 aa3.41□□□□□ -1.86
CXXC4-202ENST00000466963 GEMIN7Q9H840 131 aaKnown RBP3.41□□□□□ -1.86
CXXC4-202ENST00000466963 DEFA1P59665 94 aa3.4□□□□□ -1.86
CXXC4-202ENST00000466963 DEFA3P59666 94 aa3.4□□□□□ -1.86
CXXC4-202ENST00000466963 C9orf116Q5BN46 136 aaPredicted RBP3.4□□□□□ -1.87
CXXC4-202ENST00000466963 PRR26Q8N8Z3 221 aa3.4□□□□□ -1.87
CXXC4-202ENST00000466963 ENKURQ8TC29 256 aa3.4□□□□□ -1.87
CXXC4-202ENST00000466963 MBD3L1Q8WWY6 194 aa3.4□□□□□ -1.87
CXXC4-202ENST00000466963 RPP21Q9H633 154 aaKnown RBP3.4□□□□□ -1.87
CXXC4-202ENST00000466963 JPT2Q9H910 190 aa3.4□□□□□ -1.87
CXXC4-202ENST00000466963 FAT4Q6V0I7 4981 aa3.4□□□□□ -1.87
CXXC4-202ENST00000466963 IGLV4-60A0A075B6I1 120 aa3.39□□□□□ -1.87
CXXC4-202ENST00000466963 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.39□□□□□ -1.87
CXXC4-202ENST00000466963 PLA2G10O15496 165 aa3.39□□□□□ -1.87
CXXC4-202ENST00000466963 IFNA1P01562 189 aa3.39□□□□□ -1.87
CXXC4-202ENST00000466963 MRPS36P82909 103 aaKnown RBP3.39□□□□□ -1.87
CXXC4-202ENST00000466963 MEF2BQ02080 365 aaPredicted RBP3.39□□□□□ -1.87
CXXC4-202ENST00000466963 CT83Q5H943 113 aa3.39□□□□□ -1.87
CXXC4-202ENST00000466963 MARVELD1Q9BSK0 173 aa3.39□□□□□ -1.87
CXXC4-202ENST00000466963 BCL2L11O43521 198 aa3.39□□□□□ -1.87
CXXC4-202ENST00000466963 NTF3P20783 257 aa3.39□□□□□ -1.87
CXXC4-202ENST00000466963 BAGE2Q86Y30 109 aa3.39□□□□□ -1.87
CXXC4-202ENST00000466963 SMDT1Q9H4I9 107 aa3.39□□□□□ -1.87
CXXC4-202ENST00000466963 H0YIZ8 118 aa3.39□□□□□ -1.87
CXXC4-202ENST00000466963 CXCL5P42830 114 aa3.39□□□□□ -1.87
CXXC4-202ENST00000466963 RAB5CP51148 216 aa3.39□□□□□ -1.87
CXXC4-202ENST00000466963 LINC00242Q5T6M2 205 aa3.39□□□□□ -1.87
CXXC4-202ENST00000466963 C9orf62Q8N4C0 152 aa3.39□□□□□ -1.87
CXXC4-202ENST00000466963 OR10AG1Q8NH19 301 aa3.39□□□□□ -1.87
CXXC4-202ENST00000466963 LYPD6BQ8NI32 183 aa3.38□□□□□ -1.87
CXXC4-202ENST00000466963 TYMSOSQ8TAI1 123 aa3.38□□□□□ -1.87
CXXC4-202ENST00000466963 BORCS7Q96B45 105 aa3.38□□□□□ -1.87
CXXC4-202ENST00000466963 CDIP1Q9H305 208 aa3.38□□□□□ -1.87
CXXC4-202ENST00000466963 CDC42SE2Q9NRR3 84 aa3.38□□□□□ -1.87
CXXC4-202ENST00000466963 SPANXA1Q9NS26 97 aa3.38□□□□□ -1.87
CXXC4-202ENST00000466963 TRBV27A0A0K0K1C4 114 aa3.38□□□□□ -1.87
CXXC4-202ENST00000466963 LINC01549A6NIU2 74 aa3.38□□□□□ -1.87
CXXC4-202ENST00000466963 PDE6DO43924 150 aa3.38□□□□□ -1.87
CXXC4-202ENST00000466963 SDHCQ99643 169 aaPredicted RBP3.38□□□□□ -1.87
CXXC4-202ENST00000466963 IGLV5-37A0A075B6J1 123 aa3.37□□□□□ -1.87
CXXC4-202ENST00000466963 A0A087WZ39 114 aa3.37□□□□□ -1.87
CXXC4-202ENST00000466963 A0A1B0GW15 77 aa3.37□□□□□ -1.87
CXXC4-202ENST00000466963 GRIFINA4D1Z8 144 aa3.37□□□□□ -1.87
CXXC4-202ENST00000466963 MAP1LC3B2A6NCE7 125 aa3.37□□□□□ -1.87
CXXC4-202ENST00000466963 BCE1O60756 84 aa3.37□□□□□ -1.87
CXXC4-202ENST00000466963 G0S2P27469 103 aa3.37□□□□□ -1.87
CXXC4-202ENST00000466963 GAGE2BQ13066 116 aa3.37□□□□□ -1.87
CXXC4-202ENST00000466963 MAP1LC3BQ9GZQ8 125 aa3.37□□□□□ -1.87
CXXC4-202ENST00000466963 ZNF706Q9Y5V0 76 aaPredicted RBP3.37□□□□□ -1.87
CXXC4-202ENST00000466963 INMT-MINDY4F8WBC2 141 aa3.37□□□□□ -1.87
CXXC4-202ENST00000466963 VCYO14598 125 aa3.37□□□□□ -1.87
CXXC4-202ENST00000466963 SIX6O95475 246 aa3.37□□□□□ -1.87
CXXC4-202ENST00000466963 PMCHP20382 165 aa3.37□□□□□ -1.87
CXXC4-202ENST00000466963 LINC01551Q86U37 167 aa3.37□□□□□ -1.87
CXXC4-202ENST00000466963 LINC00304Q8N9R0 145 aa3.37□□□□□ -1.87
CXXC4-202ENST00000466963 KIR2DL4Q99706 377 aa3.37□□□□□ -1.87
CXXC4-202ENST00000466963 ST20Q9HBF5 79 aa3.37□□□□□ -1.87
CXXC4-202ENST00000466963 IGLV7-46A0A075B6I9 117 aa3.37□□□□□ -1.87
CXXC4-202ENST00000466963 C7orf77A4D0Y5 90 aa3.37□□□□□ -1.87
CXXC4-202ENST00000466963 TSHBP01222 138 aa3.37□□□□□ -1.87
CXXC4-202ENST00000466963 MGPP08493 103 aa3.37□□□□□ -1.87
CXXC4-202ENST00000466963 GIPP09681 153 aaPredicted RBP3.37□□□□□ -1.87
CXXC4-202ENST00000466963 NKX2-5P52952 324 aaPredicted RBP3.37□□□□□ -1.87
CXXC4-202ENST00000466963 SEC11AP67812 179 aa3.37□□□□□ -1.87
CXXC4-202ENST00000466963 HIGD2BQ4VC39 106 aa3.37□□□□□ -1.87
CXXC4-202ENST00000466963 RNASEKQ6P5S7 137 aaKnown RBP3.37□□□□□ -1.87
CXXC4-202ENST00000466963 GFRA4Q9GZZ7 299 aa3.37□□□□□ -1.87
CXXC4-202ENST00000466963 NDUFC2-KCTD14E9PQ53 114 aa3.36□□□□□ -1.87
CXXC4-202ENST00000466963 M0R036 132 aa3.36□□□□□ -1.87
CXXC4-202ENST00000466963 FOXA3P55318 350 aaPredicted RBP3.36□□□□□ -1.87
CXXC4-202ENST00000466963 CCL20P78556 96 aa3.36□□□□□ -1.87
CXXC4-202ENST00000466963 SPAG11BQ08648 103 aa3.36□□□□□ -1.87
CXXC4-202ENST00000466963 LINC00337Q8N6G1 96 aa3.36□□□□□ -1.87
CXXC4-202ENST00000466963 LINC00846Q9NV44 126 aa3.36□□□□□ -1.87
CXXC4-202ENST00000466963 LRP2P98164 4655 aa3.36□□□□□ -1.87
CXXC4-202ENST00000466963 UBE2BP63146 152 aa3.36□□□□□ -1.87
CXXC4-202ENST00000466963 CLPSL2Q6UWE3 100 aa3.36□□□□□ -1.87
CXXC4-202ENST00000466963 KRTAP4-8Q9BYQ9 185 aa3.36□□□□□ -1.87
CXXC4-202ENST00000466963 Q9UF83 564 aa3.36□□□□□ -1.87
CXXC4-202ENST00000466963 A0A1W2PNN7 141 aa3.35□□□□□ -1.87
CXXC4-202ENST00000466963 SFTA2Q6UW10 78 aa3.35□□□□□ -1.87
CXXC4-202ENST00000466963 FAM231DQ6ZW35 169 aa3.35□□□□□ -1.87
CXXC4-202ENST00000466963 C20orf78Q9BR46 151 aa3.35□□□□□ -1.87
CXXC4-202ENST00000466963 K7EMI3 77 aa3.35□□□□□ -1.87
CXXC4-202ENST00000466963 M0QXV9 152 aa3.35□□□□□ -1.87
CXXC4-202ENST00000466963 SSNA1O43805 119 aa3.35□□□□□ -1.87
CXXC4-202ENST00000466963 CEBPGP53567 150 aa3.35□□□□□ -1.87
CXXC4-202ENST00000466963 SSTP61278 116 aa3.35□□□□□ -1.87
CXXC4-202ENST00000466963 UBE2G2P60604 165 aa3.35□□□□□ -1.87
CXXC4-202ENST00000466963 ZNF345Q14585 488 aa3.35□□□□□ -1.87
CXXC4-202ENST00000466963 LINC00173Q6ZV60 143 aa3.35□□□□□ -1.87
CXXC4-202ENST00000466963 TGIF2-C20orf24A0A0A6YYL0 155 aa3.34□□□□□ -1.87
CXXC4-202ENST00000466963 LINC00862A6NCI5 91 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms